BAC Information

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BAC

Clone NameB6Ng01-107K10
Chromosome2 (Build37)
Map Location 55,668,245 - 55,668,954
singlet/doubletsinglet
Overlap genenone
Upstream geneGalnt13, LOC666936, Kcnj3
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107K10.bB6Ng01-107K10.g
ACCDH915056DH915057
length269368
definitionDH915056|Mus musculus domesticus DNA, BAC clone: B6Ng01-107K10, 5' end.DH915057|Mus musculus domesticus DNA, BAC clone: B6Ng01-107K10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ccaaagcaaatggatggaactaaaaattatcatcctgggtgaggtaaccc
agacctaaaaggacatacatgatatgtactcaataataagttgatattaa
cagtaaagtacaggataagcatgctataatccacagatccaaaggtgcca
aataaaaagcactgtacacaggtacaattttggatctttctcagaagtgg
aaacaaaatatatatcagggatagatggaaggagagaagtagatggaaaa
ggggatgggaagagggagt

tcatgatcccgtggatcattctgtatccatccatatatgggcagcgataa
ctaaggagagagagagagagagagacagagagagagagagagagagagag
agagagagacagagagagacagagagagacagagagagacagagagagac
agaaagagacagagaaacagagagacagagagacagagagacagagacag
gattgtgagggagtaaaatggtgatggaaataaggggaagttggagatta
tagaaataattatcatatgtaattttatatacatttatgaaattctcact
aatacattttaaaataaagtccaaattaaccaaaatttaaaatattgata
aatgtcactgcatcactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_55668245_55668954
seq2: B6Ng01-107K10.g_69_442 (reverse)

seq1  AAGTGAGACAGATCACATACTTAATATTCAACCCTTGGATTGAGATTGGG  50
                                                        
seq2  --------------------------------------------------  0

seq1  GATCTATAAGGAAGAGTTAGGGGAAGGACTGAAGGAGCTGAAGGAAATTG  100
                                                        
seq2  --------------------------------------------------  0

seq1  CAACCCTATAGGAAGAACAATAGCATCAACTAATCCAGACCCTAGAGACC  150
                                                        
seq2  --------------------------------------------------  0

seq1  AATTTAGAGCCCCAGATAATGTAATAAACATCGAGATTTTAACAAGTTAG  200
                                                        
seq2  --------------------------------------------------  0

seq1  GGGATCTGGTATTAAGTATATTGGTAAACAACATAGTCAAGTAAGGATTA  250
                                                        
seq2  --------------------------------------------------  0

seq1  TAGGAAATCAGAGTTATGCGGTTTAGTAGTCTAGAAAGTTAGGGTGTTAT  300
                                                        
seq2  --------------------------------------------------  0

seq1  AGGCATAACTGTTGAGAATTTTAGGGATACACAGATAAGTGCTGCAGTGA  350
                                          ||||| ||||||||
seq2  ------------------------------------AAGTGATGCAGTGA  14

seq1  CATTTATCATTATTTTAAATTTTGGTTAATTTGGACTTTATTTTAAAATG  400
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATCAATATTTTAAATTTTGGTTAATTTGGACTTTATTTTAAAATG  64

seq1  TATTAGTGAGAATTTCATAAATGTATATAAAATTACATATGATAATTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTGAGAATTTCATAAATGTATATAAAATTACATATGATAATTATT  114

seq1  TCTATAATCTCCAACTTCCCCTTATTTCCATCACCATTTTACTCCCTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAATCTCCAACTTCCCCTTATTTCCATCACCATTTTACTCCCTCAC  164

seq1  AATCCTGTCTCTGTCTCTCTGTCTCTCTGTCTCTCTGTTTCTCTGTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGTCTCTGTCTCTCTGTCTCTCTGTCTCTCTGTTTCTCTGTCTCT  214

seq1  TTCTGTCTCTCTCTGTCTCTCTCTGTCTCTCTCTGTCTCTCTCTGTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCTCTCTCTGTCTCTCTCTGTCTCTCTCTGTCTCTCTCTGTCTCT  264

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCC  314

seq1  TTAGTTATCGCTGCCCATATATGGATGGATACAGAATGATCCACGGGATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTATCGCTGCCCATATATGGATGGATACAGAATGATCCACGGGATC  364

seq1  ATGAGAATTC  710
      ||||||||||
seq2  ATGAGAATTC  374


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