BAC Information

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BAC

Clone NameB6Ng01-107M15
Chromosome2 (Build37)10 (Build37)
Map Location 142,776,666 - 142,777,6983,987,247 - 3,987,966
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107M15.bB6Ng01-107M15.g
ACCDH915152DH915153
length986939
definitionDH915152|Mus musculus domesticus DNA, BAC clone: B6Ng01-107M15, 5' end.DH915153|Mus musculus domesticus DNA, BAC clone: B6Ng01-107M15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,666 - 142,777,698)(3,987,247 - 3,987,966)
sequence
gaattctttgttcagttctgagccccaatttttaatggggttatttgatt
ttctgaagttcaccttcttgagttctttatatatgtaggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcatttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtaaaaggagataagtatggatcaattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttcattctt
ctgagatcttctttaatttctttcttcagagacttgaagttttatcatac
agatctttcacttccttagtagagtcacgctgagatattttatattattt
gtgactattgaaagggtgttgtttccctaatttctt
gaattcatttcctattgttgaactgattgggagaacagcctatagtcaaa
gtcagaaacacaaagggacctgaaaacggtcaacacctactccatgaagt
ggatagaagcgaacatccttatcctggtgaaggaggcatatacaatcaca
taggttccccatagatggtcagaagtaaagcatactacaggcatgacagc
ctttcagagtacagtcagcccctatgttatagtttggagttaaaacactc
cacgacctcacatgtttaaacagttggttcctgtatggtgatgttgttgt
aagaggttatagaaccttctaatgtacgaattgtccacaaagcataagga
tatgagttcggagttttaggttatattacagcctggatccagcaaatgtc
tcagcttcctagtctactgatatgtaagcaagctatgctgtttgtttcta
ctgtcagagcagtgagccattctcatcacacccatcaatgtaccttctcc
actatgacagactatgtcctttccaaatctgccacatccattccagtagt
gacccacgtgacaggcccaaaagcctggacacagtttcaaggtgaaaagt
tcacagaaacttagtctcctgaaaccgtggcatcctgtaataatgaatgc
tccaaatctgtctttgctttggttggtaaatggatctgtgtgctttccct
caatactgttttattataagtacctctgaggattgattttgacctatagc
taagttagattcttcagcagtcctaggcagtccttgagccaaacctgcac
ttggatagctgagtcactgccctacacaggaacttacaattatctaggaa
ggaggaaagttgtgctctagggaggaaaatagagtagatacttagaacta
tagatagctgagttacacccatacacaggatttacatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776666_142777698
seq2: B6Ng01-107M15.b_45_617 (reverse)

seq1  TGGTATAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGA  50

seq1  AATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAA  100

seq1  CCATCCAGAGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAAC  150
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAAC  150

seq1  TGGTTGTTATCATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTG  200
      ||||||||||| |||||||||||| |||| ||||||||||||||||||| 
seq2  TGGTTGTTATCGTGTAGAAGAATGCGAATTGATCCATACTTATCTCCTTT  200

seq1  TACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGA  250

seq1  CACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGC  300

seq1  ACAGGGGACAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATC  350
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATC  350

seq1  GAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAA  400

seq1  AAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATC  450
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATC  450

seq1  TTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGA  500
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTTACCTATCCTAAATCAGATAGGGGACTAATATCCTACATATATAAAGA  500

seq1  ACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGG  550
      ||||||||||||| ||||||||||||||||||||||||||||||| ||||
seq2  ACTCAAGAAGGTGAACTTCAGAAAATCAAATAACCCCATTAAAAATTGGG  550

seq1  GCTCACAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTG  600
      ||||| ||            ||| |||||    |||              
seq2  GCTCAGAA----------CTGAACAAAGA----ATTC-------------  573

seq1  CTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACT  650
                                                        
seq2  --------------------------------------------------  573

seq1  TATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATA  700
                                                        
seq2  --------------------------------------------------  573

seq1  AAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGA  750
                                                        
seq2  --------------------------------------------------  573

seq1  AGATATGGGCACAGGGGAAAAATTCCTGAACAGAAGAGCAATGGCTTGTG  800
                                                        
seq2  --------------------------------------------------  573

seq1  CTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTC  850
                                                        
seq2  --------------------------------------------------  573

seq1  TGCAAGGCAAAAGACACTGTCTATAAGACAAAAAGACCACCAACAGACTG  900
                                                        
seq2  --------------------------------------------------  573

seq1  GGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACA  950
                                                        
seq2  --------------------------------------------------  573

seq1  TATATAAAGAACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCATT  1000
                                                        
seq2  --------------------------------------------------  573

seq1  AAAAAATGGGGCTCAGAACTGAACAAAGAATTC  1033
                                       
seq2  ---------------------------------  573

seq1: chr10_3987247_3987966
seq2: B6Ng01-107M15.g_68_787

seq1  GAATTCATTTCCTATTGTTGAACTGATTGGGAGAACAGCCTATAGTCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCCTATTGTTGAACTGATTGGGAGAACAGCCTATAGTCAAA  50

seq1  GTCAGAAACACAAAGGGACCTGAAAACGGTCAACACCTACTCCATGAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAAACACAAAGGGACCTGAAAACGGTCAACACCTACTCCATGAAGT  100

seq1  GGATAGAAGCGAACATCCTTATCCTGGTGAAGGAGGCATATACAATCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGAAGCGAACATCCTTATCCTGGTGAAGGAGGCATATACAATCACA  150

seq1  TAGGTTCCCCATAGATGGTCAGAAGTAAAGCATACTACAGGCATGACAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTCCCCATAGATGGTCAGAAGTAAAGCATACTACAGGCATGACAGC  200

seq1  CTTTCAGAGTACAGTCAGCCCCTATGTTATAGTTTGGAGTTAAAACACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGAGTACAGTCAGCCCCTATGTTATAGTTTGGAGTTAAAACACTC  250

seq1  CACGACCTCACATGTTTAAACAGTTGGTTCCTGTATGGTGATGTTGTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGACCTCACATGTTTAAACAGTTGGTTCCTGTATGGTGATGTTGTTGT  300

seq1  AAGAGGTTATAGAACCTTCTAATGTACGAATTGTCCACAAAGCATAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGTTATAGAACCTTCTAATGTACGAATTGTCCACAAAGCATAAGGA  350

seq1  TATGAGTTCGGAGTTTTAGGTTATATTACAGCCTGGATCCAGCAAATGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGTTCGGAGTTTTAGGTTATATTACAGCCTGGATCCAGCAAATGTC  400

seq1  TCAGCTTCCTAGTCTACTGATATGTAAGCAAGCTATGCTGTTTGTTTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTCCTAGTCTACTGATATGTAAGCAAGCTATGCTGTTTGTTTCTA  450

seq1  CTGTCAGAGCAGTGAGCCATTCTCATCACACCCATCAATGTACCTTCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGAGCAGTGAGCCATTCTCATCACACCCATCAATGTACCTTCTCC  500

seq1  ACTATGACAGACTATGTCCTTTCCAAATCTGCCACATCCATTCCAGTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGACAGACTATGTCCTTTCCAAATCTGCCACATCCATTCCAGTAGT  550

seq1  GACCCACGTGACAGGCCCAAAAGCCTGGACACAGTTTCAAGGTGAAAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCACGTGACAGGCCCAAAAGCCTGGACACAGTTTCAAGGTGAAAAGT  600

seq1  TCACAGAAACTTAGTCTCCTGAAACCGTGGCATCCTGTAATAATGAATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAAACTTAGTCTCCTGAAACCGTGGCATCCTGTAATAATGAATGC  650

seq1  TCCAAATCTGTCTTTGCTTTGGTTGGTAAATGGATCTGTGTGCTTTCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATCTGTCTTTGCTTTGGTTGGTAAATGGATCTGTGTGCTTTCCCT  700

seq1  CAATACTGTTTTATTATAAG  720
      ||||||||||||||||||||
seq2  CAATACTGTTTTATTATAAG  720