BAC Information

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BAC

Clone NameB6Ng01-107P21
Chromosome2 (Build37)
Map Location 88,935,915 - 88,936,991
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219
Downstream geneOlfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924, Olfr1252, GA_x5J8B7W62NC-992588-991951, Olfr1253-ps1, Olfr1254, Olfr1255, Olfr1256, Olfr48, Olfr1257, Olfr1258, Olfr1259, Olfr1260, Olfr1261, Olfr1262, Olfr1263, Olfr1264, Olfr1265, Olfr140, Olfr1266-ps1, Olfr1267-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107P21.bB6Ng01-107P21.g
ACCDH915296DH915297
length3371,067
definitionDH915296|Mus musculus domesticus DNA, BAC clone: B6Ng01-107P21, 5' end.DH915297|Mus musculus domesticus DNA, BAC clone: B6Ng01-107P21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
agggaccccaatggaagagctaggggaaggactgaaggagctgaggaaga
ctgcaaccctatatgaagagcaatatcaactaatcattccacacggggct
cgcagggactgaaacattaaccaaagggtatacatggagggaaccaggac
cccaggtacacatgtagcagaggatgcccttatctgacattaataggagg
ggaggaggcttgattttctagagggatgctagaggggtgaggtgggataa
agtgaatgggtagaggaacaccctaacagaggcaagggagaaggaggata
gaataggggtttggtggaggggcacctgggaagggag
gaattcaatgggctcactagactgctaatcaacaaaagtgagttcaagga
ttagtggagactttggcacaaaagaatggtatttggcgtcatagatagtc
ataataagtaccccttttggctctaagttcatgtgtatcggaagaagtac
tgtccactcctcatatatacagatatttatgtctcacagcacataataga
taggcatacatacattgacatgcacaaaaaaccttacactcaggaaaact
aaaagcaaagcgtgaaggcatcaatactaatttgtacaggtatggcattt
atgaactcactctgaagacaagacatctttttctatggtgtacaataatt
ttgaggtgagaaaactgtttttctctttttaagcttttattctgactttg
ctactctacattgttatgtgataattaaagccagctcattttttaactcc
ctgaatcaaagagactcttccttttaaaaacagtagaatttttgacattc
tgattcttacttttggaactaggaaaattctacacattctcaatattttc
atttaaaaagttgtcttacaaaataaagtacatttgtaattatgagaaga
tacatatgcagctagagacatgagctacgggaggtactggttagttcata
ttgttgtttcacctatagggttgcagatccctttaggtccttcgttactt
tctctagctcctccattgggggccctgtgatccatccaatagctgactgt
gagcattcactttgccaggccccggcatagtctcataagagacagctata
tcattgtcctttcagcaaaatcttgctagtgtatgcaatggtgtcagcat
ttggaagttgattatgggatggatccctggatatggcattctctagatgg
tccatcctttcatctcagctcaaagtttgtctctgtaactccttcatggg
tgttttgttctagttctagaggcaagtacccacaatttgtcatcattctc
ttgagtttcatgtgttcgcaatgtatcttatatcctggattctagttctg
ggctaaattcactatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_88935915_88936991
seq2: B6Ng01-107P21.g_75_1132 (reverse)

seq1  TGATAAGTGAATATTAGCCCAGAAACTTAGAATACCCAAGATATAAGATA  50
      |||| ||||||| |||||||||||   ||||||  ||| |||||||||||
seq2  TGAT-AGTGAAT-TTAGCCCAGAA--CTAGAAT--CCAGGATATAAGATA  44

seq1  CAATTTGCGAAACACATGAAACTCAAGAAGAATGATGACCAAATTGTGGG  100
      ||  ||||| ||||||||||||||||| |||||||||| |||||||||||
seq2  CA--TTGCG-AACACATGAAACTCAAG-AGAATGATGA-CAAATTGTGGG  89

seq1  TACTTTGCCCCTTCTTAGAACTGGGAACAAAACACCCATGGAAGGAGTTA  150
      ||| ||||| |    |||||||  ||||||||||||||| ||||||||||
seq2  TAC-TTGCCTC----TAGAACT-AGAACAAAACACCCAT-GAAGGAGTTA  132

seq1  CAGAGACAAACTTTGGAGCTGAGATGAAAGGATGGACCATCTAGAGAATG  200
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CAGAGACAAACTTT-GAGCTGAGATGAAAGGATGGACCATCTAGAGAATG  181

seq1  CCATATCCAGGGATCCATCCCATAATCAACTTCCAAATGCTGACACCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATCCAGGGATCCATCCCATAATCAACTTCCAAATGCTGACACCATT  231

seq1  GCATACACTAGCAAGATTTTGCTGAAAGGACAATGATATAGCTGTCTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACACTAGCAAGATTTTGCTGAAAGGACAATGATATAGCTGTCTCTT  281

seq1  ATGAGACTATGCCGGGGCCTGGCAAAGTGAATGCTCACAGTCAGCTATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGACTATGCCGGGGCCTGGCAAAGTGAATGCTCACAGTCAGCTATTG  331

seq1  GATGGATCACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTAACGAAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATCACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTAACGAAGGAC  381

seq1  CTAAAGGGATCTGCAACCCTATAGGTGAAACAACAATATGAACTAACCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGGGATCTGCAACCCTATAGGTGAAACAACAATATGAACTAACCAG  431

seq1  TACCTCCCGTAGCTCATGTCTCTAGCTGCATATGTATCTTCTCATAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCCGTAGCTCATGTCTCTAGCTGCATATGTATCTTCTCATAATTA  481

seq1  CAAATGTACTTTATTTTGTAAGACAACTTTTTAAATGAAAATATTGAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTACTTTATTTTGTAAGACAACTTTTTAAATGAAAATATTGAGAA  531

seq1  TGTGTAGAATTTTCCTAGTTCCAAAAGTAAGAATCAGAATGTCAAAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGAATTTTCCTAGTTCCAAAAGTAAGAATCAGAATGTCAAAAATT  581

seq1  CTACTGTTTTTAAAAGGAAGAGTCTCTTTGATTCAGGGAGTTAAAAAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTTTTTAAAAGGAAGAGTCTCTTTGATTCAGGGAGTTAAAAAATG  631

seq1  AGCTGGCTTTAATTATCACATAACAATGTAGAGTAGCAAAGTCAGAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGCTTTAATTATCACATAACAATGTAGAGTAGCAAAGTCAGAATAA  681

seq1  AAGCTTAAAAAGAGAAAAACAGTTTTCTCACCTCAAAATTATTGTACACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTAAAAAGAGAAAAACAGTTTTCTCACCTCAAAATTATTGTACACC  731

seq1  ATAGAAAAAGATGTCTTGTCTTCAGAGTGAGTTCATAAATGCCATACCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAAAGATGTCTTGTCTTCAGAGTGAGTTCATAAATGCCATACCTG  781

seq1  TACAAATTAGTATTGATGCCTTCACGCTTTGCTTTTAGTTTTCCTGAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATTAGTATTGATGCCTTCACGCTTTGCTTTTAGTTTTCCTGAGTG  831

seq1  TAAGGTTTTTTGTGCATGTCAATGTATGTATGCCTATCTATTATGTGCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTTTTTTGTGCATGTCAATGTATGTATGCCTATCTATTATGTGCTG  881

seq1  TGAGACATAAATATCTGTATATATGAGGAGTGGACAGTACTTCTTCCGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACATAAATATCTGTATATATGAGGAGTGGACAGTACTTCTTCCGAT  931

seq1  ACACATGAACTTAGAGCCAAAAGGGGTACTTATTATGACTATCTATGACG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGAACTTAGAGCCAAAAGGGGTACTTATTATGACTATCTATGACG  981

seq1  CCAAATACCATTCTTTTGTGCCAAAGTCTCCACTAATCCTTGAACTCACT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATACCATTCTTTTGTGCCAAAGTCTCCACTAATCCTTGAACTCACT  1031

seq1  TTTGTTGATTAGCAGTCTAGTGAGCCC  1077
      |||||||||||||||||||||||||||
seq2  TTTGTTGATTAGCAGTCTAGTGAGCCC  1058