BAC Information

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BAC

Clone NameB6Ng01-108H14
Chromosome2 (Build37)
Map Location 43,146,835 - 43,147,851
singlet/doubletsinglet
Overlap genenone
Upstream geneLrp1b, LOC100041228
Downstream geneLOC100041245, Kynu, Arhgap15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108H14.bB6Ng01-108H14.g
ACCDH915650DH915651
length1,2111,023
definitionDH915650|Mus musculus domesticus DNA, BAC clone: B6Ng01-108H14, 5' end.DH915651|Mus musculus domesticus DNA, BAC clone: B6Ng01-108H14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctattgtctgcaaaaaaaaaatactttgacttttttcttttctgt
tttcaacctctttacctctttcactggttttcttgactgcagtatagatg
aaaaatatcccttatagtgtcaaacatgagagcattggatcctcaaatca
cagtggcactgtttgagggaggattaaatcttaaaattttgctggaggaa
gtatggtcctgggtgggggtacaggatgtttttttgggagtaaagtcctt
tgacaggcctagctcaatctgtgtacttcatgtttgtatttggagaggtg
atcagtcagcttcttgttcctgctaccatgtatgctacttgctgccgtat
tttcttgtcttgaaggactcttattcctgttgaaccataggaacaaataa
actttgctttctataatttgcttttgatcacagtgtttaattgcagcaac
aaaaacgtacataatacatcgtctcagtgactatattgaataaaagggga
gtgagtttacattcttgtcgtgttgctaattttacagaaaatttcttgag
attttctctatttagccaaatcttggctgtaggcttgctgtacatttctt
ttcttatgttgagatgtatctgtggtactccgagatttctctaggacttt
tatcataaagacatgctggatttttatcaaaaaccttttctgcatctagt
gaaatgatgctgtgttttctgtccttacgatgctcaaaacagagttattt
cacagcagggttgtgatctcaagttcctctgcttttctgatatttgggga
agcagcctctccaatttttatattttctattctatgatctggtaccttca
acagtttggttaaacagcatagaacaagtttctcttgatagtatgaactc
ttttggatctcaaggccccataagtaaagtggaggttcttcagagaactt
acaaggcttttgggacactgtataatatgtgatggctgatcacacgttcc
tcatggtagaacaggaaaggagataggctctccctagaaagcatcttagg
acttagcactgaaatggaaaggcctaaggaaggatgatggtttctacatg
gaatcctacacttgtactacatacgcgcaggtaaaagcaatgcttggaac
acggggagattccaaaaaatactccaggaatagtgggtcttcctgacaga
ttcctggtgca
gaattcctttcaataatagcagtcaaagcaaaatccaatgtcttcttgcc
cataaatacaaaggccatataagatggagacagtgacagagtggcacgag
gctaccttttaatacaagagagtttctgactaatgtccacaaaaatctct
tgacaataagaaggaataacaaacatatttgtctaacttctttttaaaaa
ccaattacaagtttcactttcagagaataatatttctttcccaagttcac
ttcatctaaaaataatcagcactagagatattttttgtaagtgacgttgt
taatttacatttaagaactattttacaagttccacctggtttctgtcaaa
aaggctgcaatgacatctgttagacactgtcagtagttcctgaaaattca
aagaaactaaagcttccccactccatttgcaatcactaaatgattaattg
ggatttctttcccattgaatacatgtactgttaggttaaatagatattta
ctaatctaatataataaagactttttttgttttattatttttcttttttc
ctttttttaattattattaatcactccattcatttacatctcaaatgata
tcccactttctggttacccctccataaccttcccatctcacatctgccct
tccccctcccttttgcctgtatcagagtcctctcacacccacccaccctt
tcccaccctctgctccagcatccccttgctctgaggcatcaaacctccct
ggaacaaagggcctcctctttggttgctgtagggcaaggtcatcttctgc
aatatatgtatctggagccatggatccctgcaggtacactcctttggttg
gtggtctagtctctgggagaactgggtgaccaggccagcctatgttgttc
tccagtagggttgcaatgaccctcagctcctccactccttctgccagctc
cctaccaggttcctgagttcagcctgagggtcggctccaagcatctgctc
tgcttggtcagttgcttgctagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_43146835_43147851
seq2: B6Ng01-108H14.g_68_1080

seq1  GAATTCCTTTCAATAATAGCAGTCAAAGCAAAATCCAATGTCTTCTTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTCAATAATAGCAGTCAAAGCAAAATCCAATGTCTTCTTGCC  50

seq1  CATAAATACAAAGGCCATATAAGATGGAGACAGTGACAGAGTGGCACGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATACAAAGGCCATATAAGATGGAGACAGTGACAGAGTGGCACGAG  100

seq1  GCTACCTTTTAATACAAGAGAGTTTCTGACTAATGTCCACAAAAATCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCTTTTAATACAAGAGAGTTTCTGACTAATGTCCACAAAAATCTCT  150

seq1  TGACAATAAGAAGGAATAACAAACATATTTGTCTAACTTCTTTTTAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATAAGAAGGAATAACAAACATATTTGTCTAACTTCTTTTTAAAAA  200

seq1  CCAATTACAAGTTTCACTTTCAGAGAATAATATTTCTTTCCCAAGTTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTACAAGTTTCACTTTCAGAGAATAATATTTCTTTCCCAAGTTCAC  250

seq1  TTCATCTAAAAATAATCAGCACTAGAGATATTTTTTGTAAGTGACGTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTAAAAATAATCAGCACTAGAGATATTTTTTGTAAGTGACGTTGT  300

seq1  TAATTTACATTTAAGAACTATTTTACAAGTTCCACCTGGTTTCTGTCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTACATTTAAGAACTATTTTACAAGTTCCACCTGGTTTCTGTCAAA  350

seq1  AAGGCTGCAATGACATCTGTTAGACACTGTCAGTAGTTCCTGAAAATTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGCAATGACATCTGTTAGACACTGTCAGTAGTTCCTGAAAATTCA  400

seq1  AAGAAACTAAAGCTTCCCCACTCCATTTGCAATCACTAAATGATTAATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACTAAAGCTTCCCCACTCCATTTGCAATCACTAAATGATTAATTG  450

seq1  GGATTTCTTTCCCATTGAATACATGTACTGTTAGGTTAAATAGATATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCTTTCCCATTGAATACATGTACTGTTAGGTTAAATAGATATTTA  500

seq1  CTAATCTAATATAATAAAGACTTTTTTTGTTTTATTATTTTTCTTTTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCTAATATAATAAAGACTTTTTTTGTTTTATTATTTTTCTTTTTTC  550

seq1  CTTTTTTTAATTATTATTAATCACTCCATTCATTTACATCTCAAATGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTAATTATTATTAATCACTCCATTCATTTACATCTCAAATGATA  600

seq1  TCCCACTTTCTGGTTACCCCTCCATAACCTTCCCATCTCACATCTGCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTTTCTGGTTACCCCTCCATAACCTTCCCATCTCACATCTGCCCT  650

seq1  TCCCCCTCCCTTTTGCCTGTATCAGAGTCCTCTCACACCCACCCACCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCTCCCTTTTGCCTGTATCAGAGTCCTCTCACACCCACCCACCCTT  700

seq1  TCCCACCCTCTGCTCCAGCATCCCCTTGCTCTGAGGCATCAAACCTCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCCTCTGCTCCAGCATCCCCTTGCTCTGAGGCATCAAACCTCCCT  750

seq1  GGAACAAAGGGCCTCCTCTTTGGTTGCTGTAGGGCAAGGTCATCTTCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAAAGGGCCTCCTCTTTGGTTGCTGTAGGGCAAGGTCATCTTCTGC  800

seq1  AATATATGTATCTGGAGCCATGGATCCCTGCAGGTACACTCC-TTGGTTG  849
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AATATATGTATCTGGAGCCATGGATCCCTGCAGGTACACTCCTTTGGTTG  850

seq1  GTGGTCTAGTCTCTGGGAGAACTGGGTGACCAGGCCAGCCTATGTTGTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTAGTCTCTGGGAGAACTGGGTGACCAGGCCAGCCTATGTTGTTC  900

seq1  TTCCAGTAGGGTTGCAATGACCCTCAGCTCCTCCACTCCTTCTGCCAGCT  949
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TCCAGTAGGGTTGCAATGACCCTCAGCTCCTCCACTCCTTCTGCCAGCT  949

seq1  CCCCTACCAGGTTCCCTGAGTTCAGCCTGAGGGTCGGCTCCAAGCATCTG  999
       |||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  -CCCTACCAGGTT-CCTGAGTTCAGCCTGAGGGTCGGCTCCAAGCATCTG  997

seq1  CCTCTGCTTTGTTCAGTT  1017
       |||||| ||| ||||||
seq2  -CTCTGC-TTGGTCAGTT  1013