BAC Information

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BAC

Clone NameB6Ng01-108N22
Chromosome2 (Build37)
Map Location 111,206,951 - 111,208,106
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668799, Slc5a12, Muc15, LOC668802, LOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282
Downstream geneOlfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108N22.bB6Ng01-108N22.g
ACCDH915941DH915942
length1,1011,156
definitionDH915941|Mus musculus domesticus DNA, BAC clone: B6Ng01-108N22, 5' end.DH915942|Mus musculus domesticus DNA, BAC clone: B6Ng01-108N22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttctttagctctgggttatttggtttttctggaggctaaccct
ttgagttttttgtgtattgtggatactagtttgttatcagatgtaaggtt
ggtatagatattttcccaatatataggttgctattttgtcctattgacag
tgtcagaagatttgcagtttcatgaggtcctatttgtcaattgttactgt
tagagcctgagccattggtgttctgttcagcaaattttaccctgtgccaa
cacgttcaaggctctttctcactttaacttctattagattcagtgtatct
ggttttatgtggaggtccttggtcaacttggactgaactttgtacaagaa
gattaaaaggggtcaatttgcactcttctacatgcagacctccagttaga
ccaggttcatttgttgaaaatgctttctttttccagtgtatggttattgg
cttccttgttaaagaccatgtgaccataggtgtatggatttcttattttg
ggggtcttcagttctattccattgatgtaccttactgtcactgtataaac
accatgcggttttatcactattcctcagtagtacaggttgagattaggat
ggtgattccctcagacagtcttttattgttgagatttgttctctctatac
tgggttttttgttattccagctgaagctgcagattgttccttttatctct
gtgaagaattgagttggaattttgatggggattgcattaactccctagat
tgcttttggtaagatgatcctatttactatgttaatcctaccaacccatg
accatgagagatctttccatcttctgaggtcttcttcaatttctttcttc
agagatttttggtcatacagatcttttgcttgctcagttagagtagacca
aaatattctatattatttatgactattgtgaatggtatggttccctaatt
tttctcagtccattcaccctttggttagaggaaggctacttattgttgag
ttatttatattcagccacctttgatgaaatggttttcagggtgtaggagt
tcctctggtaattggggggggtcgctatatatactacacctcgttcatct
g
gaattcataaaatcctgtctacatttctgtctcaatttttcttttttttc
tcttttctttctttaacatcatccctccatttatttctcttgaatttttc
cctcttctttatttctgtactttttaatattatatttaagtttaaaatta
gaagaccaaaatgtcaccaaattagggaatattttgcaatttctgtgtta
ggaattaaaagaactgttacatttaaagaattttaaaaatattatatttt
attaataatattgcatatttatttcctgggtcgatctcaataaagtagta
aaactgtagtgcaaaataaggtaattctaaattcaagtccccaatattac
ttccagactatgaaataaatgatatgataggaatcatgattttcagtagt
ccaagaaaattaatgaaatttgtaaaacaaggtacttgtccatttaaata
tgtatacacataaatataaatgagaaatttcattaataaaaattatcaga
tttaaatatcaagcaaatataacccaaccctttgaatatcaatggcattt
cacatatattcttttctcattgttgaattctgagagaactatgattagtc
tatgcacagccactctcatctccctccaatctcaattaactactctacta
tattgtctgtatcttgagaaaatagtacacccaataatataatcagataa
cattagagtaagtttagtgacctatgagtatgatattcattcaagttgag
aaaattggaacttttaagcttacagtaagagatcattagatgtgagcata
taaaatactttaagtgtccaaagtctcaaggattagttgggaagggaaat
tttctactatatatttgtcaaacaaaacaattaaatacaaatacaagact
cactgtaaaatcatcaaagaagtaataaaataatatgctactaaacaaac
aaaccttaaatgagtaattgtgatgagaatgaaagcacaattaatttgtg
atgtattcactacacacttgcaagaacagtcctcccttttggatgatgtt
tctgtaattcgccctttaaaatacaaatctctttacatgtggttctgctt
tgaccaattgtgcctgaagtttttcctcaagtgtggaatgtatacactga
acaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_111206951_111208106
seq2: B6Ng01-108N22.g_66_1221 (reverse)

seq1  TATTG-TCAGTGTATACAATCCACAC-TGAGGAAAAACACTCA-GCACAA  47
      ||||| |||||||||||| ||||||| |||||||||||  ||| ||||||
seq2  TATTGTTCAGTGTATACATTCCACACTTGAGGAAAAAC-TTCAGGCACAA  49

seq1  TTGGTCAAAGCAGAAACCACAATGT-AAGAGATTTGTATTT--AAGGGCG  94
      ||||||||||||| |||||| |||| |||||||||||||||  |||||||
seq2  TTGGTCAAAGCAG-AACCAC-ATGTAAAGAGATTTGTATTTTAAAGGGCG  97

seq1  AATTACAGGAAACATCATCCAAAAGGGAGGACTTGTCTTGCAAGGTGTGT  144
      ||||||| |||||||||||||||||||||||||  |||||||| ||||||
seq2  AATTACA-GAAACATCATCCAAAAGGGAGGACTGTTCTTGCAA-GTGTGT  145

seq1  AGTGAATACATCACAAATTAATTGTGCTTTCATTCTTCATCACAATTACT  194
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGTGAATACATCACAAATTAATTGTGCTTTCATTC-TCATCACAATTACT  194

seq1  CATTTAAGGTTTGTTTGTTTTAGTAGCATATTATTTTATTACTTCTTTGA  244
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CATTTAAGGTTTGTTTG-TTTAGTAGCATATTATTTTATTACTTCTTTGA  243

seq1  TGATTTTACAGTGAGTCTTGTATTTGTATTTAATTGTTTTGTTTGACAAA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTACAGTGAGTCTTGTATTTGTATTTAATTGTTTTGTTTGACAAA  293

seq1  TATATAGTAGAAAATTTCCCTT-CCAACTAATCCTTGAGACTTTGGACAC  343
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TATATAGTAGAAAATTTCCCTTCCCAACTAATCCTTGAGACTTTGGACAC  343

seq1  TTAAAGTATTTTATATGCTCACATCTAATGATCTCTTACTGTAAGCTTAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTATTTTATATGCTCACATCTAATGATCTCTTACTGTAAGCTTAA  393

seq1  AAGTTCCAATTTTCTCAACTTGAATGAATATCATACTCATAGGTCACTAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCAATTTTCTCAACTTGAATGAATATCATACTCATAGGTCACTAA  443

seq1  ACTTACTCTAATGTTATCTGATTATATTATTGGGTGTACTATTTTCTCAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACTCTAATGTTATCTGATTATATTATTGGGTGTACTATTTTCTCAA  493

seq1  GATACAGACAATATAGTAGAGTAGTTAATTGAGATTGGAGGGAGATGAGA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGACAATATAGTAGAGTAGTTAATTGAGATTGGAGGGAGATGAGA  543

seq1  GTGGCTGTGCATAGACTAATCATAGTTCTCTCAGAATTCAACAATGAGAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTGTGCATAGACTAATCATAGTTCTCTCAGAATTCAACAATGAGAA  593

seq1  AAGAATATATGTGAAATGCCATTGATATTCAAAGGGTTGGGTTATATTTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATATATGTGAAATGCCATTGATATTCAAAGGGTTGGGTTATATTTG  643

seq1  CTTGATATTTAAATCTGATAATTTTTATTAATGAAATTTCTCATTTATAT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATATTTAAATCTGATAATTTTTATTAATGAAATTTCTCATTTATAT  693

seq1  TTATGTGTATACATATTTAAATGGACAAGTACCTTGTTTTACAAATTTCA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGTATACATATTTAAATGGACAAGTACCTTGTTTTACAAATTTCA  743

seq1  TTAATTTTCTTGGACTACTGAAAATCATGATTCCTATCATATCATTTATT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTCTTGGACTACTGAAAATCATGATTCCTATCATATCATTTATT  793

seq1  TCATAGTCTGGAAGTAATATTGGGGACTTGAATTTAGAATTACCTTATTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGTCTGGAAGTAATATTGGGGACTTGAATTTAGAATTACCTTATTT  843

seq1  TGCACTACAGTTTTACTACTTTATTGAGATCGACCCAGGAAATAAATATG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTACAGTTTTACTACTTTATTGAGATCGACCCAGGAAATAAATATG  893

seq1  CAATATTATTAATAAAATATAATATTTTTAAAATTCTTTAAATGTAACAG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTATTAATAAAATATAATATTTTTAAAATTCTTTAAATGTAACAG  943

seq1  TTCTTTTAATTCCTAACACAGAAATTGCAAAATATTCCCTAATTTGGTGA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTAATTCCTAACACAGAAATTGCAAAATATTCCCTAATTTGGTGA  993

seq1  CATTTTGGTCTTCTAATTTTAAACTTAAATATAATATTAAAAAGTACAGA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGGTCTTCTAATTTTAAACTTAAATATAATATTAAAAAGTACAGA  1043

seq1  AATAAAGAAGAGGGAAAAATTCAAGAGAAATAAATGGAGGGATGATGTTA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGAAGAGGGAAAAATTCAAGAGAAATAAATGGAGGGATGATGTTA  1093

seq1  AAGAAAGAAAAGAGAAAAAAAAGAAAAATTGAGACAGAAATGTAGACAGG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAAGAGAAAAAAAAGAAAAATTGAGACAGAAATGTAGACAGG  1143

seq1  ATTTTATGAATTC  1156
      |||||||||||||
seq2  ATTTTATGAATTC  1156