BAC Information

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BAC

Clone NameB6Ng01-108P16
Chromosome2 (Build37)
Map Location 82,611,443 - 82,743,921
singlet/doubletdoublet
Overlap genenone
Upstream geneZfp804a, LOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292
Downstream geneLOC433440, Fsip2, LOC545429, Ppia-ps2_981.1, LOC100040818, LOC668077, Zc3h15, Itgav, Dnmt3l-ps1, D430039N05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108P16.bB6Ng01-108P16.g
ACCDH916019DH916020
length1,1211,081
definitionDH916019|Mus musculus domesticus DNA, BAC clone: B6Ng01-108P16, 5' end.DH916020|Mus musculus domesticus DNA, BAC clone: B6Ng01-108P16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,611,443 - 82,612,571)(82,743,123 - 82,743,921)
sequence
gaattcaaagtcttctattgaatttcaagtcttagaatgtgaccatagga
acccaaataaatgaagttggattatcatggggttattttaatgctgatca
actgtaaatgataggagataaaatttaaatagcagtgcatacatcaagcc
caaagattaataacatgactattaagcatcactatcaccaactcttgtaa
cttatagcacctccaaaggaattctgttctagagtcaatcatagttctac
actaaaataaaagttcccaagctgtttgcacaaatattttatgtacttta
tgcatccggatgtataaaatctatggttcattcacccagacacaagagta
gaacaatcagttcaaaatattaagctgtaagtataaattataaagtttta
taaagaactaggtaatattatatcagcttgaaatatttctaaaactctaa
aattattttgaaataaaatgcttaacatttcttattcaaaactgagtctc
aaaaattaaagttcatacatattgacttgtgtattgagctccataaaagg
gcttcatttgttcttagtttacaaacatattagatgataagaggtaattt
ctatgtattgaaggaattttttcttgtaacatcctcctaagttcttttag
aatggattgaaccatttttattttccccaaatttctcatactgaattttt
tccccactgatgttttgactggttgttagtttctgctacacaaatacatc
tttgtcaacttacctaaagtaaattgtatgtaaaaatttttttcttgcag
aaataccttgtcagataaagaaccagtcaaaatgacatccatttgactga
tatgccttttcaaacctcagtcacggtagttcatcaaagctattgtagta
gcagcatctctgctactgcatacaatcagaaccatgcttacctagctaca
aatcacagcaaatcaatgcatcctttatatcaccatgctagatcttggca
aatatcttactgtatataaagcgcagagagtaaatatgtcagagtgcctg
taacttaaatttacattagaatgtactatatttgaaatgacacaaaagta
gtaccctgactgtattcttac
gaattctcttttttattcttttttcttattggatattttctttatttaca
tttcaaatgttatccatttccccagtccctcctgaacccatttattccac
ccctctttttatgagggtgcttccccaaccacccactcctgcctcccagc
cttggcattcccctacaatggagacatcatgatttcttttgagaattctg
tttagatctttacatcatgtattttattaaaattgcattctttgagggtt
tgttgttgttgtttgtttgtttttattttcttttttgatgctcagttttt
ccttggttctttctttattttatgtattagccctctattgatgtgtagct
ggtaaaatactttacaattctttagcctgttggttggtcctttgttatac
gtaagctttttaaatttgttttcagtgcctgagttaaaatgtgttctgct
tagaaaaatcttttcctatgccaatgaattcagggttatcccctactttc
tcttctatcaagttctgtgtatctggtatatgttgaagccattgatcctt
ctgaagttgagttttgtgcaggatgatgagttttggatctttggaatctt
ctgcatgcatccattcagtttcattaacactatttgttgaagatgctgtg
tgaatcccattgtgtatttttggcttctgtatcaaaaatcaggtgtccat
aggggcagggaagcttgggtttgtctgactttgcttccttgagaggcatg
catgcatcattgatttttttcctgttatagtccacggctcctggggcatg
atgtgccttcctgttcttgagagacttatgtattctcccaggcagtgaaa
cattcagactgctttgtatttctctgcatgtcccattactagtcaaggaa
tcatggaagcttgacaggacaattggtcttagacatagtcttgtataccc
tgtataacttgcaaagatcttgtatcctggcatgacactttatgatcatg
gcattgcattctatttttgtttctgaaaagttgaaagtcttgatttctct
caataattggtgcagccctcattatgttatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_82611443_82612571
seq2: B6Ng01-108P16.b_47_1167

seq1  GAATTCAAAGTCTTCTATTGAATTTCAAGTCTTAGAATGTGACCATAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGTCTTCTATTGAATTTCAAGTCTTAGAATGTGACCATAGGA  50

seq1  ACCCAAATAAATGAAGTTGGATTATCATGGGGTTATTTTAATGCTGATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAATAAATGAAGTTGGATTATCATGGGGTTATTTTAATGCTGATCA  100

seq1  ACTGTAAATGATAGGAGATAAAATTTAAATAGCAGTGCATACATCAAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAAATGATAGGAGATAAAATTTAAATAGCAGTGCATACATCAAGCC  150

seq1  CAAAGATTAATAACATGACTATTAAGCATCACTATCACCAACTCTTGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATTAATAACATGACTATTAAGCATCACTATCACCAACTCTTGTAA  200

seq1  CTTATAGCACCTCCAAAGGAATTCTGTTCTAGAGTCAATCATAGTTCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGCACCTCCAAAGGAATTCTGTTCTAGAGTCAATCATAGTTCTAC  250

seq1  ACTAAAATAAAAGTTCCCAAGCTGTTTGCACAAATATTTTATGTACTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAATAAAAGTTCCCAAGCTGTTTGCACAAATATTTTATGTACTTTA  300

seq1  TGCATCCGGATGTATAAAATCTATGGTTCATTCACCCAGACACAAGAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCCGGATGTATAAAATCTATGGTTCATTCACCCAGACACAAGAGTA  350

seq1  GAACAATCAGTTCAAAATATTAAGCTGTAAGTATAAATTATAAAGTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAATCAGTTCAAAATATTAAGCTGTAAGTATAAATTATAAAGTTTTA  400

seq1  TAAAGAACTAGGTAATATTATATCAGCTTGAAATATTTCTAAAACTCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAACTAGGTAATATTATATCAGCTTGAAATATTTCTAAAACTCTAA  450

seq1  AATTATTTTGAAATAAAATGCTTAACATTTCTTATTCAAAACTGAGTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTTGAAATAAAATGCTTAACATTTCTTATTCAAAACTGAGTCTC  500

seq1  AAAAATTAAAGTTCATACATATTGACTTGTGTATTGAGCTCCATAAAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAAAGTTCATACATATTGACTTGTGTATTGAGCTCCATAAAAGG  550

seq1  GCTTCATTTGTTCTTAGTTTACAAACATATTAGATGATAAGAGGTAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCATTTGTTCTTAGTTTACAAACATATTAGATGATAAGAGGTAATTT  600

seq1  CTATGTATTGAAGGAATTTTTTCTTGTAACATCCTCCTAAGTTCTTTTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTATTGAAGGAATTTTTTCTTGTAACATCCTCCTAAGTTCTTTTAG  650

seq1  AATGGATTGAACCATTTTTATTTTCCCCAAATTTCTCATACTGAATTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATTGAACCATTTTTATTTTCCCCAAATTTCTCATACTGAATTTTT  700

seq1  TCCCCACTGATGTTTTGACTGGTTGTTAGTTTCTGCTACACAAATACATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACTGATGTTTTGACTGGTTGTTAGTTTCTGCTACACAAATACATC  750

seq1  TTTGTCAACTTACCTAAAGTAAATTGTATGTAAAAATTTTTTTCTTGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCAACTTACCTAAAGTAAATTGTATGTAAAAATTTTTTTCTTGCAG  800

seq1  AAATACCTTGTCAGATAAAGAACCAGTCAAAATGACATCCATTTGACTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCTTGTCAGATAAAGAACCAGTCAAAATGACATCCATTTGACTGA  850

seq1  TATGCCTTTTCAAACCTCAGTCACGGTAGTTCATCAAAGCTATTGTAGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCTTTTCAAACCTCAGTCACGGTAGTTCATCAAAGCTATTGTAGTA  900

seq1  GCAGCATCTCTGCTACTGCAATACAATCAGAACCATGCTTACCTAGCTAC  950
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GCAGCATCTCTGCTACTGC-ATACAATCAGAACCATGCTTACCTAGCTAC  949

seq1  AAATCACAGCAAATCAATGCATCCTTTATATCACCATGCTAGATCTTGGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACAGCAAATCAATGCATCCTTTATATCACCATGCTAGATCTTGGC  999

seq1  AAATATCTTACTGTATATAAAGCGGCAGAAGAGTAAATATGTCAGGAGTG  1050
      ||||||||||||||||||||||| |||| ||||||||||||||| |||||
seq2  AAATATCTTACTGTATATAAAGC-GCAG-AGAGTAAATATGTCA-GAGTG  1046

seq1  CCTGTAACTTAAAATTTACATTAGAAATGTACTATATTTGAAATGACACA  1100
      |||||||||| ||||||||||||| |||||||||||||||||||||||||
seq2  CCTGTAACTT-AAATTTACATTAG-AATGTACTATATTTGAAATGACACA  1094

seq1  AAAGTAGTACCCTGACTTGTTATTCTTAC  1129
      |||||||||||||||||   |||||||||
seq2  AAAGTAGTACCCTGACT--GTATTCTTAC  1121

seq1: chr2_82743123_82743921
seq2: B6Ng01-108P16.g_364_1151 (reverse)

seq1  CATAACATAATTGAGGCTGCAACAATTTTATTGAGAGAAATC-AGACTTT  49
      |||||||||||   ||||||| |||  ||||||||||||||| |||| ||
seq2  CATAACATAATGAGGGCTGCACCAA--TTATTGAGAGAAATCAAGAC-TT  47

seq1  TCATACCTTTTTCAGAAAC-AAAATAGAATGGCAATTGCCATGATCAATA  98
      ||| ||  ||||||||||| |||||||||| |||| |||||||||| |||
seq2  TCA-AC--TTTTCAGAAACAAAAATAGAAT-GCAA-TGCCATGATC-ATA  91

seq1  AAGTTGTCATTGCCAGGATACAAGGATCTTTGCAAGTTATACAGGGTATA  148
      ||| ||||| ||||||||||||| ||||||||||||||||||||||||||
seq2  AAG-TGTCA-TGCCAGGATACAA-GATCTTTGCAAGTTATACAGGGTATA  138

seq1  CAAGACTAATGTCTAAGGCCAATTGTCCTGTCAAGCTTCCATGATTCCTT  198
      ||||||| ||||||||| ||||||||||||||||||||||||||||||||
seq2  CAAGACT-ATGTCTAAGACCAATTGTCCTGTCAAGCTTCCATGATTCCTT  187

seq1  GACTAGTAATGGGACATGCAGAGAAATACAAAGCAGTCTGAATGTTTCAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGTAATGGGACATGCAGAGAAATACAAAGCAGTCTGAATGTTTCAC  237

seq1  TGCCTGGGAGAATACATAAGTCTCTCAAGAACAGGAAGGCACATCATGCC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGGAGAATACATAAGTCTCTCAAGAACAGGAAGGCACATCATGCC  287

seq1  CCAGGAGCCGTGGACTATAACAGGAAAAAAATCAATGATGCATGCATGCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGCCGTGGACTATAACAGGAAAAAAATCAATGATGCATGCATGCC  337

seq1  TCTCAAGGAAGCAAAGTCAGACAAACCCAAGCTTCCCTGCCCCTATGGAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGGAAGCAAAGTCAGACAAACCCAAGCTTCCCTGCCCCTATGGAC  387

seq1  ACCTGATTTTTGATACAGAAGCCAAAAATACACAATGGGATTCACACAGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGATTTTTGATACAGAAGCCAAAAATACACAATGGGATTCACACAGC  437

seq1  ATCTTCAACAAATAGTGTTAATGAAACTGAATGGATGCATGCAGAAGATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCAACAAATAGTGTTAATGAAACTGAATGGATGCATGCAGAAGATT  487

seq1  CCAAAGATCCAAAACTCATCATCCTGCACAAAACTCAACTTCAGAAGGAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGATCCAAAACTCATCATCCTGCACAAAACTCAACTTCAGAAGGAT  537

seq1  CAATGGCTTCAACATATACCAGATACACAGAACTTGATAGAAGAGAAAGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGCTTCAACATATACCAGATACACAGAACTTGATAGAAGAGAAAGT  587

seq1  AGGGGATAACCCTGAATTCATTGGCATAGGAAAAGATTTTTCTAAGCAGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGATAACCCTGAATTCATTGGCATAGGAAAAGATTTTTCTAAGCAGA  637

seq1  ACACATTTTAACTCAGGCACTGAAAACAAATTTAAAAAGCTTACGTATAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTTTAACTCAGGCACTGAAAACAAATTTAAAAAGCTTACGTATAA  687

seq1  CAAAGGACCAACCAACAGGCTAAAGAATTGTAAAGTATTTTACCAGCTAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGACCAACCAACAGGCTAAAGAATTGTAAAGTATTTTACCAGCTAC  737

seq1  ACATCAATAGAGGGCTAATACATAAAATAAAGAAAGAACCAAGGAAAAAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAATAGAGGGCTAATACATAAAATAAAGAAAGAACCAAGGAAAAAC  787

seq1  T  799
      |
seq2  T  788