BAC Information

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BAC

Clone NameB6Ng01-109E22
Chromosome2 (Build37)
Map Location 32,134,048 - 32,261,916
singlet/doubletdoublet
Overlap gene2900010J23Rik, Golga2, Dnm1, Ciz1, 1110008P14Rik, Lcn2, Ptges2, LOC100041671
Upstream geneFreq, LOC622345, LOC670182, LOC665700, BC034076, Ass1, Fubp3, LOC100041465, Prdm12, Exosc2, Abl1, BC094274, Fibcd1, Lamc3, 2810003C17Rik, Nup214, A130092J06Rik, LOC100040058, Ppapdc3, 5830434P21Rik, Pomt1, Uck1, LOC622534
Downstream geneSlc25a25, 4933440H19Rik, C230093N12Rik, Dpm2, Pip5kl1, St6galnac4, St6galnac6, Ak1, Eng, Fpgs, Cdk9, Sh2d3c, Tor2a, Ttc16, Ptrh1, 1700019L03Rik, Stxbp1, 9130404D14Rik, Lrsam1, Snora65, Slc2a8, Garnl3, Ralgps1, Angptl2, Zbtb34
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109E22.bB6Ng01-109E22.g
ACCDH916248DH916249
length548565
definitionDH916248|Mus musculus domesticus DNA, BAC clone: B6Ng01-109E22, 5' end.DH916249|Mus musculus domesticus DNA, BAC clone: B6Ng01-109E22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,134,048 - 32,134,601)(32,261,345 - 32,261,916)
sequence
tcatgggggcctggagagatggctcagtggttaaaagcacagactactct
tccagggctcctgagtttaattcccagcaactacaaggtggctcacaacc
atctgcattgggattggatgccctcttctagtgtttctgagacagcaaca
gtgtactcacatacataaataaattttaaaaaagataatttcatgactaa
cagccgtgagagtcagcaggagtgagctgttgtgatcaatggcaggtgtg
acgggctagtagagacaaggatcagaaccagagactgctcatatgtttat
taacaaaagggacaaccacacacacctactcacaagtatgtttaggaacc
ttaacattgacaatacccacccctcccaatactcctcttctctagaaccc
accccaaactttggagggcttctagcatcttttaaaatctgaaaaccata
tgaacatactgtctagactctgccttttatgcccccatcctcctgtccct
gtgggctgtaaatgaaaatctccaagaagctgttcagtctttcaggtt
aggactctcaaagccccacaatgacgcccagctctcctcagcaacagact
gaaggcttcggacaaatttcagctggttaacaccatggtggacaggcttg
ccataagttgcacccttaggaactgggcgtttacgaccaccacggcggac
atgaatcctgtaaatgacatagctttgcttagccttgtaccccagtcttt
gagctttatcaggccgggtggggcggggagccctgtgcaactggcggtat
tgccagcagcggaccctcagaagaaagcgcatcacataggactgcttctt
tctccatagctccaggatgtatttgtatgcacccatcttggctcacctga
tggctgccgccagaggaaagcatcttctaaatatttttaagtggaaattt
gacaaaaacaggaaaaatcccttagccctccctgggggctctctctctct
ctctctctctctctctctctctctctctctctctctacatgaaggaagta
tctcgttctcaggattcacaaagatttttcgggggtctggactcagtgct
gagaaacataatggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_32134048_32134601
seq2: B6Ng01-109E22.b_47_600

seq1  GAATTCTCATGGGGGCCTGGAGAGATGGCTCAGTGGTTAAAAGCACAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGGGGGCCTGGAGAGATGGCTCAGTGGTTAAAAGCACAGAC  50

seq1  TACTCTTCCAGGGCTCCTGAGTTCAATTCCCAGCAACTACAAGGTGGCTC  100
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TACTCTTCCAGGGCTCCTGAGTTTAATTCCCAGCAACTACAAGGTGGCTC  100

seq1  ACAACCATCTGCATTGGGATTGGATGCCCTCTTCTAGTGTTTCTGAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCATCTGCATTGGGATTGGATGCCCTCTTCTAGTGTTTCTGAGACA  150

seq1  GCAACAGTGTACTCACATACATAAATAAATTTTAAAAAAGATAATTTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAGTGTACTCACATACATAAATAAATTTTAAAAAAGATAATTTCAT  200

seq1  GACTAACAGCCGTGAGAGTCAGCAGGAGTGAGCTGTTGTGATCAATGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAACAGCCGTGAGAGTCAGCAGGAGTGAGCTGTTGTGATCAATGGCA  250

seq1  GGTGTGACGGGCTAGTAGAGACAAGGATCAGAACCAGAGACTGCTCATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGACGGGCTAGTAGAGACAAGGATCAGAACCAGAGACTGCTCATAT  300

seq1  GTTTATTAACAAAAGGGACAACCACACACACCTACTCACAAGTATGTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTAACAAAAGGGACAACCACACACACCTACTCACAAGTATGTTTA  350

seq1  GGAACCTTAACATTGACAATACCCACCCCTCCCAATACTCCTCTTCTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCTTAACATTGACAATACCCACCCCTCCCAATACTCCTCTTCTCTA  400

seq1  GAACCCACCCCAAACTTTGGAGGGCTTCTAGCATCTTTTAAAATCTGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCACCCCAAACTTTGGAGGGCTTCTAGCATCTTTTAAAATCTGAAA  450

seq1  ACCATATGAACATACTGTCTAGACTCTGCCTTTTATGCCCCCATCCTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATATGAACATACTGTCTAGACTCTGCCTTTTATGCCCCCATCCTCCT  500

seq1  GTCCCTGTGGGCTGTAGATGAAAATCTCCAAGAAGCTGCTCAGTCATTCA  550
      |||||||||||||||| ||||||||||||||||||||| |||||| ||||
seq2  GTCCCTGTGGGCTGTAAATGAAAATCTCCAAGAAGCTGTTCAGTCTTTCA  550

seq1  GGTT  554
      ||||
seq2  GGTT  554

seq1: chr2_32261345_32261916
seq2: B6Ng01-109E22.g_68_638 (reverse)

seq1  GACATTATGTTTCTCAGCACTGAGTCAAGGACACCGGAAAATCCTGGAGA  50
      | |||||||||||||||||||||||| ||  | ||| |||||| | | ||
seq2  GCCATTATGTTTCTCAGCACTGAGTCCAGACCCCCGAAAAATCTTTGTGA  50

seq1  ATCCTGAGAACGAGATACTTCCTTCATGGTAGAGAGAGAGAGAGAGAGAG  100
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATCCTGAGAACGAGATACTTCCTTCAT-GTAGAGAGAGAGAGAGAGAGAG  99

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGCCCCCAGGGAGGGCTAAGGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGCCCCCAGGGAGGGCTAAGGGAT  149

seq1  TTTTCCTGTTTTTGTCAAATTTCCACTTAAAAATATTTAGAAGATGCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTGTTTTTGTCAAATTTCCACTTAAAAATATTTAGAAGATGCTTT  199

seq1  CCTCTGGCGGCAGCCATCAGGTGAGCCAAGATGGGTGCATACAAATACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGCGGCAGCCATCAGGTGAGCCAAGATGGGTGCATACAAATACAT  249

seq1  CCTGGAGCTATGGAGAAAGAAGCAGTCCTATGTGATGCGCTTTCTTCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGCTATGGAGAAAGAAGCAGTCCTATGTGATGCGCTTTCTTCTGA  299

seq1  GGGTCCGCTGCTGGCAATACCGCCAGTTGCACAGGGCTCCCCGCCCCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCGCTGCTGGCAATACCGCCAGTTGCACAGGGCTCCCCGCCCCACC  349

seq1  CGGCCTGATAAAGCTCAAAGACTGGGGTACAAGGCTAAGCAAAGCTATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCTGATAAAGCTCAAAGACTGGGGTACAAGGCTAAGCAAAGCTATGT  399

seq1  CATTTACAGGATTCATGTCCGCCGTGGTGGTCGTAAACGCCCAGTTCCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACAGGATTCATGTCCGCCGTGGTGGTCGTAAACGCCCAGTTCCTA  449

seq1  AGGGTGCAACTTATGGCAAGCCTGTCCACCATGGTGTTAACCAGCTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGCAACTTATGGCAAGCCTGTCCACCATGGTGTTAACCAGCTGAAA  499

seq1  TTTGTCCGAAGCCTTCAGTCTGTTGCTGAGGAGAGCTGGGCGTCATTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCGAAGCCTTCAGTCTGTTGCTGAGGAGAGCTGGGCGTCATTGTG  549

seq1  GGGCTTTGAGAGTCCTGAATTC  572
      ||||||||||||||||||||||
seq2  GGGCTTTGAGAGTCCTGAATTC  571