BAC Information

Click to search

BAC

Clone NameB6Ng01-110C20
Chromosome2 (Build37)13 (Build37)
Map Location 67,787,539 - 67,788,68150,807,185 - 50,807,941
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneGm1322, Cmya3, LOC621171
Downstream geneLOC227995, B3galt1, Stk39, LOC100039683, Gm1323, 4933409G03Rik, 4932414N04Rik, LOC667443, Lass6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110C20.bB6Ng01-110C20.g
ACCDH916875DH916876
length1,139962
definitionDH916875|Mus musculus domesticus DNA, BAC clone: B6Ng01-110C20, 5' end.DH916876|Mus musculus domesticus DNA, BAC clone: B6Ng01-110C20, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(67,787,539 - 67,788,681)(50,807,185 - 50,807,941)
sequence
gaattcatcatggcctgtgggtaatccaggggaaaactaatgagacgggc
tcttctttcaagttcccaagatttgcagttcaggccactttccaacaatt
ttgatgagccaggagaaggaaggaggacaggcagaactcatggcagtcaa
attacagtccttaaggaaactaacaacagaagggcggctgaacacgagat
tgactccgctaaggctctcagtgggagcattgagatgttggtcccaaatg
agaattcacaatgtaagcatgcccagggtcctggggcaatcccctgtaga
gagcatgggttagcgcttgcctaatttcagtcacttcaaggggccattta
aaaaagcactagccttacaattgaatagcaacttgaaaatcagtgggaga
ttaaaacaaaaagagagagccaatgttacaacagatgttaatgagcacag
aagacacttctaaaggaaaaaaattaaagagccaggaagtaaacacctga
catataagacccagtgacttgtatgtttcatgtattcaagccatttttga
ttggtgaaaaggtgtttgtccattgtggctattctagcagactacctggg
gctgagcactttaatctagaacagggacttatttagcttaaaattttatt
agctaataatctaaacagtgtggcattggctgctgaaatgccttggaagc
tgtactgcaacaggacggagggcatcgtggcaggaaaatatgcaccaagg
agagaccacggcaagatcacagagtgagacaggcagccagagagaaacga
gattcctcaaagaacacatatgattccttctaaagtctaaagtatgcctc
caatgacttaaaaacaccccacgacccttcccctttaaaactcccaccac
ttcttaatatcaccagggctagagaccaagctcccagcaccatgatatta
tttgagggatagttaattcacatcaataccacacagtgggtatgtctctt
tttgttgggcaagttcaatgaacagagagtcagggaacttagctagctca
aactcatgacagtgctgataaagacagggactgtactacaggactacagg
acgctcaggtacagttctttttgtggttatagagaagaa
gaattctacgtaactaaggggtcatgtcctattatttggcaatgtacccg
gttcattctgaggttgttccaggaggcccttatctcaaaaatgttcttgg
aacagtctttagttgggagggttcgaactctagggtgaggagttcaggaa
tgcattctggggtgaagagttcaggagtgttctgggaacaatctctagat
gggaggggtcgggctctggggtgaggaagagttcagtaattttttatctt
tattcttcattccccactccttttagaaaatagctctaatcttagagcga
gttttcaacctcttggaggacccgatattgttgccttagtaccataacct
gtactgcatttatcctttctctaataaaagctaccaatttattaaggatg
caggggccaaaagtaagcaaaagcataagtgtaattaaaggtcctgctat
ggtggagaggagagtggtgagccaaggggacttattaaaccagctttcga
accatccttgttggctttctctttctcttttacgtatatctaggcgttct
ctaagtttggccatagaatctttgattactcctgaatggtcaacataaaa
acaacattcttcttttagggcagcacagagtcctccttctttaaggaata
ataagtctaatccccttctattctgtagcaccacttcggacagggaagtt
aaagattcttctaatttggttatagactgttctatagttctaagatcaac
atccatagctgcacgtagttcttcatagtattggggggtcttaattaagg
cagcggttcctgtacctactccagccgctactcccaatcttaatagaact
gccaaagttaaagtaacgggttctcttctccaagcggacccgatgctcaa
tttgtctaaaaggagctatcatcatgatacagagtctaggattaagctga
ccaaatgcagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_67787539_67788681
seq2: B6Ng01-110C20.b_46_1184

seq1  GAATTCATCATGGCCTGTGGGTAATCCAGGGGAAAACTAATGAGACGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCATGGCCTGTGGGTAATCCAGGGGAAAACTAATGAGACGGGC  50

seq1  TCTTCTTTCAAGTTCCCAAGATTTGCAGTTCAGGCCACTTTCCAACAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTCAAGTTCCCAAGATTTGCAGTTCAGGCCACTTTCCAACAATT  100

seq1  TTGATGAGCCAGGAGAAGGAAGGAGGACAGGCAGAACTCATGGCAGTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGAGCCAGGAGAAGGAAGGAGGACAGGCAGAACTCATGGCAGTCAA  150

seq1  ATTACAGTCCTTAAGGAAACTAACAACAGAAGGGCGGCTGAACACGAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGTCCTTAAGGAAACTAACAACAGAAGGGCGGCTGAACACGAGAT  200

seq1  TGACTCCGCTAAGGCTCTCAGTGGGAGCATTGAGATGTTGGTCCCAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCCGCTAAGGCTCTCAGTGGGAGCATTGAGATGTTGGTCCCAAATG  250

seq1  AGAATTCACAATGTAAGCATGCCCAGGGTCCTGGGGCAATCCCCTGTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCACAATGTAAGCATGCCCAGGGTCCTGGGGCAATCCCCTGTAGA  300

seq1  GAGCATGGGTTAGCGCTTGCCTAATTTCAGTCACTTCAAGGGGCCATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGGGTTAGCGCTTGCCTAATTTCAGTCACTTCAAGGGGCCATTTA  350

seq1  AAAAAGCACTAGCCTTACAATTGAATAGCAACTTGAAAATCAGTGGGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCACTAGCCTTACAATTGAATAGCAACTTGAAAATCAGTGGGAGA  400

seq1  TTAAAACAAAAAGAGAGAGCCAATGTTACAACAGATGTTAATGAGCACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACAAAAAGAGAGAGCCAATGTTACAACAGATGTTAATGAGCACAG  450

seq1  AAGACACTTCTAAAGGAAAAAAATTAAAGAGCCAGGAAGTAAACACCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACACTTCTAAAGGAAAAAAATTAAAGAGCCAGGAAGTAAACACCTGA  500

seq1  CATATAAGACCCAGTGACTTGTATGTTTCATGTATTCAAGCCATTTTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAGACCCAGTGACTTGTATGTTTCATGTATTCAAGCCATTTTTGA  550

seq1  TTGGTGAAAAGGTGTTTGTCCATTGTGGCTATTCTAGCAGACTACCTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGAAAAGGTGTTTGTCCATTGTGGCTATTCTAGCAGACTACCTGGG  600

seq1  GCTGAGCACTTTAATCTAGAACAGGGACTTATTTAGCTTAAAATTTTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGCACTTTAATCTAGAACAGGGACTTATTTAGCTTAAAATTTTATT  650

seq1  AGCTAATAATCTAAACAGTGTGGCATTGGCTGCTGAAATGCCTTGGAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATAATCTAAACAGTGTGGCATTGGCTGCTGAAATGCCTTGGAAGC  700

seq1  TGTACTGCAACAGGACGGAGGGCATCGTGGCAGGAAAATATGCACCAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGCAACAGGACGGAGGGCATCGTGGCAGGAAAATATGCACCAAGG  750

seq1  AGAGACCACGGCAAGATCACAGAGTGAGACAGGCAGCCAGAGAGAAACGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACCACGGCAAGATCACAGAGTGAGACAGGCAGCCAGAGAGAAACGA  800

seq1  GATTCCTC-AAGAACACATATGATTCCTTCTAAGGTCTAAGGTATGCCTC  849
      |||||||| |||||||||||||||||||||||| |||||| |||||||||
seq2  GATTCCTCAAAGAACACATATGATTCCTTCTAAAGTCTAAAGTATGCCTC  850

seq1  CAATGACTTAAAAACACCCCACGACCCTTCCCCTTTAAAACTCCCACCAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGACTTAAAAACACCCCACGACCCTTCCCCTTTAAAACTCCCACCAC  900

seq1  TTCTTAATATCACCA-GGCTAGAGACCAAGCTCCCAGCA-CATGATAT--  945
      ||||||||||||||| ||||||||||||||||||||||| ||||||||  
seq2  TTCTTAATATCACCAGGGCTAGAGACCAAGCTCCCAGCACCATGATATTA  950

seq1  ATTGAGGGATAGTTAATTCACATCAATACCACACAGTGGTATTGTCTCTT  995
       ||||||||||||||||||||||||||||||||||||||   ||||||||
seq2  TTTGAGGGATAGTTAATTCACATCAATACCACACAGTGGGTATGTCTCTT  1000

seq1  TTTGTTTGGGCAAGGTTCAATGAACAGAGAGTCAAGGGAAACTTAGCTAG  1045
      |||| |||||||| ||||||||||||||||||||  || |||||||||||
seq2  TTTG-TTGGGCAA-GTTCAATGAACAGAGAGTCA--GGGAACTTAGCTAG  1046

seq1  CTCAACCTCATGACAAGTGCTGAATAAAGACAAGGACTGTACACTACAGG  1095
      ||||| |||||||| ||||||| ||||||||| |||||||  ||||||||
seq2  CTCAAACTCATGAC-AGTGCTG-ATAAAGACAGGGACTGT--ACTACAGG  1092

seq1  ACTACAGGACGCTCAGGGTACAGTTTCTTTTGTGGGTATAGAGAAGAA  1143
      ||||||||||||||| |||||||||  |||||||| ||||||||||||
seq2  ACTACAGGACGCTCA-GGTACAGTTCTTTTTGTGGTTATAGAGAAGAA  1139

seq1: chr13_50807185_50807941
seq2: B6Ng01-110C20.g_67_823

seq1  GAATTCTACGTAACTAAGGGGTCATGTCCTATTATTTGGCAATGTACCCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACGTAACTAAGGGGTCATGTCCTATTATTTGGCAATGTACCCG  50

seq1  GTTCATTCTGAGGTTGTTCCAGGAGGCCCTTATCTCAAAAATGTTCTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTCTGAGGTTGTTCCAGGAGGCCCTTATCTCAAAAATGTTCTTGG  100

seq1  AACAGTCTTTAGTTGGGAGGGTTCGAACTCTAGGATGAGGAGTTCAGGAA  150
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AACAGTCTTTAGTTGGGAGGGTTCGAACTCTAGGGTGAGGAGTTCAGGAA  150

seq1  TGCATTCTGGGGTGAAGAGTTCAGGAGTGTTCTGGGAACAATCTCTAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCTGGGGTGAAGAGTTCAGGAGTGTTCTGGGAACAATCTCTAGAT  200

seq1  GGGAGGGGTCGGGCTCTGGGGTGAGGAAGAGTTCAGTAATTTTTTATCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGGTCGGGCTCTGGGGTGAGGAAGAGTTCAGTAATTTTTTATCTT  250

seq1  TATTCTTCATTCCCCACTCCTTTTAGAAAATAGCTCTAATCTTAGAGCGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTCATTCCCCACTCCTTTTAGAAAATAGCTCTAATCTTAGAGCGA  300

seq1  GTTTTCAACCTCTTGGAGGACCCGATATTGTTGCCTTAGTACCATAACTT  350
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTTTTCAACCTCTTGGAGGACCCGATATTGTTGCCTTAGTACCATAACCT  350

seq1  GTACTGCATTTATCCTTTCTCTAATAAAAGCTACCAACTTATTAAGGATG  400
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTACTGCATTTATCCTTTCTCTAATAAAAGCTACCAATTTATTAAGGATG  400

seq1  CAGGGGCCAAAAGTAAGCAAAAGCATAAGTGTAATTAAAGGTCCTGCTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGCCAAAAGTAAGCAAAAGCATAAGTGTAATTAAAGGTCCTGCTAT  450

seq1  GGTGGAGAGGAGAGTGGTGAGCCAAGGGGACTTATTAAACCAGCTTTCGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGAGGAGAGTGGTGAGCCAAGGGGACTTATTAAACCAGCTTTCGA  500

seq1  ACCATCCTTGTTGGCTTTCTCTTTCTCTTTTACGTATATCTAGGCGTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCCTTGTTGGCTTTCTCTTTCTCTTTTACGTATATCTAGGCGTTCT  550

seq1  CTAAGTTTGGCCATAGAATCTTTGATTACTCCTGAATGGTCAACATAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTTTGGCCATAGAATCTTTGATTACTCCTGAATGGTCAACATAAAA  600

seq1  ACAACATTCTTCTTTTAGGGCAGCACAGAGTCCTCCTTCTTTAAGGAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATTCTTCTTTTAGGGCAGCACAGAGTCCTCCTTCTTTAAGGAATA  650

seq1  ATAAGTCTAATCCCCTTCTATTCTGTAGCACCACTTCGGACAGGGAAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTCTAATCCCCTTCTATTCTGTAGCACCACTTCGGACAGGGAAGTT  700

seq1  AAAGATTCTTCTAATTTGGTTATAGACTGTTCTATAGTTCTAAGATCAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTCTTCTAATTTGGTTATAGACTGTTCTATAGTTCTAAGATCAAC  750

seq1  ATCCATA  757
      |||||||
seq2  ATCCATA  757