BAC Information

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BAC

Clone NameB6Ng01-111H03
Chromosome2 (Build37)
Map Location 61,915,437 - 61,916,705
singlet/doubletsinglet
Overlap geneSlc4a10
Upstream geneTank, Psmd14, Tbr1, LOC100039274
Downstream geneDpp4, Gcg, Fap, Ifih1, Gca, Kcnh7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111H03.bB6Ng01-111H03.g
ACCDH917788DH917789
length1,2311,145
definitionDH917788|Mus musculus domesticus DNA, BAC clone: B6Ng01-111H03, 5' end.DH917789|Mus musculus domesticus DNA, BAC clone: B6Ng01-111H03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattaatacttctaaacatttactggttccattcctatgttgtaa
attgtgttactcaatctgcatggttaacatatttatcagaaaattgggta
ggcaataaaactaccggaacttaatctgtcagaaacaaaatatagttttc
attatgaataaatactttgtaatattataacttcctttaggcaatggaat
tttagttaaccttgtagtatttataatgcaaatatgaagctgtcatatct
gatacttaagtgtgtttaaataacatttaattattatgtgtatatgtatt
catgcatgcatgtgtatgttcagaggacagttggaaccaacccagctcac
caggcacagcagcataaagcataactcaccaagccattttgataaaccct
tattcttttaagaataaaattgtagtcttccatcacaatatgctttatag
atatcatctattcagtaatcattatttaaaagtgaatactgtcaaagctc
tatagactgttgtttctatatactctttttacctaagtattattagtcta
agtgatgtgtatgcacttcaaatcacagtttcttaaaactctaaaacaaa
caaataaagaaatcaccaaggttcctttgttatttatcacttgggcaaat
tttcttaaattaattctcagatcttttttaaacagtgaaacatattgctt
aggaatttatttttaaaagtggtccagagtatcaatatcttttttatttg
ttgttttgagcaagacacacaggggggattacaatttccttaaaattata
atttgtaacaacacccagagaaaacactgctcccaggcgctctaacagtg
gtgcaggttccttctctctgagctggtgccctgagcagaccatgggcaca
aactctgcagccagtcccacaacatccagaggaagctccactcccagcga
tctaacacacccaaggaaacaggatcccagagcttgtcacactagggtct
caggtccaggagcagctaattcccagagcctggacacatccagtatctca
gatcccagatcccagaatcacaggatcacagatcacagagaaagcttgac
tctgagggttctaccagctggatccgaaggaaagctccagtcgaatacag
gcaggtgcataggataacgggatgcagagcagcctagacctagccagaat
caagatatctgctcttcagaacccaaatctc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaaa
cacagaagtggatgctcacagtcagctaatggatggatcacaggctccca
atggaggagctagaagaaagtacccaggagctaaaggatctcaccctata
gttgaacacattatgactaccagtaccctgagctctgactctagctgcat
atgtatcaagatgctagtcgcatcacttgaagagagcaatgaccgcaact
ttgtgtgccgtacaggtacgcagtcaaagagcagaatgtcatcgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_61915437_61916705
seq2: B6Ng01-111H03.b_44_1274

seq1  GAATTCATTAATACTTCTAAACATTTACTGGTTCCATTCCTATGTTGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAATACTTCTAAACATTTACTGGTTCCATTCCTATGTTGTAA  50

seq1  ATTGTGTTACTCAATCTGCATGGTTAACATATTTATCAGAAAATTGGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTTACTCAATCTGCATGGTTAACATATTTATCAGAAAATTGGGTA  100

seq1  GGCAATAAAACTACCGGAACTTAATCTGTCAGAAACAAAATATAGTTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATAAAACTACCGGAACTTAATCTGTCAGAAACAAAATATAGTTTTC  150

seq1  ATTATGAATAAATACTTTGTAATATTATAACTTCCTTTAGGCAATGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGAATAAATACTTTGTAATATTATAACTTCCTTTAGGCAATGGAAT  200

seq1  TTTAGTTAACCTTGTAGTATTTATAATGCAAATATGAAGCTGTCATATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTAACCTTGTAGTATTTATAATGCAAATATGAAGCTGTCATATCT  250

seq1  GATACTTAAGTGTGTTTAAATAACATTTAATTATTATGTGTATATGTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTTAAGTGTGTTTAAATAACATTTAATTATTATGTGTATATGTATT  300

seq1  CATGCATGCATGTGTATGTTCAGAGGACAGTTGGAACCAACCCAGCTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATGCATGTGTATGTTCAGAGGACAGTTGGAACCAACCCAGCTCAC  350

seq1  CAGGCACAGCAGCATAAAGCATAACTCACCAAGCCATTTTGATAAACCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCACAGCAGCATAAAGCATAACTCACCAAGCCATTTTGATAAACCCT  400

seq1  TATTCTTTTAAGAATAAAATTGTAGTCTTCCATCACAATATGCTTTATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTTTAAGAATAAAATTGTAGTCTTCCATCACAATATGCTTTATAG  450

seq1  ATATCATCTATTCAGTAATCATTATTTAAAAGTGAATACTGTCAAAGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATCTATTCAGTAATCATTATTTAAAAGTGAATACTGTCAAAGCTC  500

seq1  TATAGACTGTTGTTTCTATATACTCTTTTTACCTAAGTATTATTAGTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGACTGTTGTTTCTATATACTCTTTTTACCTAAGTATTATTAGTCTA  550

seq1  AGTGATGTGTATGCACTTCAAATCACAGTTTCTTAAAACTCTAAAACAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGTGTATGCACTTCAAATCACAGTTTCTTAAAACTCTAAAACAAA  600

seq1  CAAATAAAGAAATCACCAAGGTTCCTTTGTTATTTATCACTTGGGCAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAAGAAATCACCAAGGTTCCTTTGTTATTTATCACTTGGGCAAAT  650

seq1  TTTCTTAAATTAATTCTCAGATCTTTTTTAAACAGTGAAACATATTGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTAAATTAATTCTCAGATCTTTTTTAAACAGTGAAACATATTGCTT  700

seq1  AGGAATTTATTTTTAAAAGTGGTCCAGAGTATCAATATC-TTTTTATTTG  749
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGGAATTTATTTTTAAAAGTGGTCCAGAGTATCAATATCTTTTTTATTTG  750

seq1  TTGTTTTGAGCAAGACACACAGGGGGGATTACAATTTCCTTAAAATTATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGAGCAAGACACACAGGGGGGATTACAATTTCCTTAAAATTATA  800

seq1  ATTTGTAACAACACCCAGAGAAAACACTGCTCCCAGGCGCTCTAACAGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTAACAACACCCAGAGAAAACACTGCTCCCAGGCGCTCTAACAGTG  850

seq1  GTGCAGGTTCCTTCTCTCTGAGCTGGTGCCCTGAGCAGACCATGGGCACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGGTTCCTTCTCTCTGAGCTGGTGCCCTGAGCAGACCATGGGCACA  900

seq1  AACTCTGCAGCCAGTCCCACAACATCCAGAGGAAGCTCCACTCCCAGGCG  949
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AACTCTGCAGCCAGTCCCACAACATCCAGAGGAAGCTCCACTCCCA-GCG  949

seq1  ATCTAACACACCCAAGGAAACAGGATCCCAGGAGCTTGGTCACACTAGGG  999
      |||||||||||||||||||||||||||||| |||||| ||||||||||||
seq2  ATCTAACACACCCAAGGAAACAGGATCCCA-GAGCTT-GTCACACTAGGG  997

seq1  TCTCAGGGTCCCAGAGGCAGCTTAATTCCCAGGAGCCTGGACACATCCAG  1049
      |||||||   ||||  ||||| ||||||||| ||||||||||||||||||
seq2  TCTCAGG--TCCAGGAGCAGC-TAATTCCCA-GAGCCTGGACACATCCAG  1043

seq1  TATCTCAGGATCCCAGGATCCCAGAATCACAGGATCACAGGATCACAGAG  1099
      ||||||| ||||||| ||||||||||||||||||||||| ||||||||||
seq2  TATCTCA-GATCCCA-GATCCCAGAATCACAGGATCACA-GATCACAGAG  1090

seq1  ACAGCTTGACTCTGAGGAGTTCTAACACAGCTGAGATCACAGGAAGGAGA  1149
      | ||||||||||||||| ||||||   |||||| ||||    |||||| |
seq2  AAAGCTTGACTCTGAGG-GTTCTA--CCAGCTG-GATC---CGAAGGA-A  1132

seq1  GGCTCCAGTCAGATATAACCAGGGCAGGTAGCACTAGAGATAACGGGATG  1199
       |||||||||  ||| |     ||||||| ||| ||| ||||||||||| 
seq2  AGCTCCAGTCGAATACA-----GGCAGGT-GCA-TAG-GATAACGGGAT-  1173

seq1  GCAGGAAGCAAGCATAAGAACATAAGCAACAGAAATCAAGATTACCTGGC  1249
      ||||  ||| ||| | ||| |   |||  ||| |||||||| || |||  
seq2  GCAG--AGC-AGCCT-AGACC--TAGC--CAG-AATCAAGA-TATCTG--  1211

seq1  ATCATCAGAACCCAATTCTC  1269
       || ||||||||||| ||||
seq2  CTCTTCAGAACCCAAATCTC  1231