BAC Information

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BAC

Clone NameB6Ng01-111K19
Chromosome2 (Build37)
Map Location 135,017,084 - 135,214,873
singlet/doubletdoublet
Overlap genePlcb1
Upstream geneHao1, Txndc13, LOC627897, LOC433478
Downstream geneLOC100043487, LOC100043786, LOC100043788, Plcb4, 6330527O06Rik, Pak7, LOC668910
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111K19.bB6Ng01-111K19.g
ACCDH917956DH917957
length9501,128
definitionDH917956|Mus musculus domesticus DNA, BAC clone: B6Ng01-111K19, 5' end.DH917957|Mus musculus domesticus DNA, BAC clone: B6Ng01-111K19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(135,213,922 - 135,214,873)(135,017,084 - 135,018,229)
sequence
gaattctatacataatatttttaggtcatgagtgactgtgggcaactcaa
ttcaaggaaagggagattgtgtggcaatttctaaagttctactaaaatgc
atcccattatattagcactagtggaccaagaagctggctaagaagatctg
aattgtatatgtaaaggagaaacttaagaattaacaatatacaaaataac
catcgattcctgctaagcctgaaatctttaggaatcacaaatattaagtg
gctcatatattgcaagcataaaggctaaagaacataaataaccgtgaaaa
tatacctagagcaagccacaaggactctctctgaagccaacccaggaacg
ttacatacaaataaataaacctagcattggagtattgcagactcaataaa
caatcgggccaaatggtagtacttttgagaatctgtatttttcaactata
gtgaaaatggcagggagtcctagagagcccattttgttttaagagaaaga
aaaatattcagcaatgaatcaaaatggctagaatgtcctagaactgacat
gcttttggccaacctgcgagtatttgatttacagatagggttttcaacac
agtgtccatagacaactgatttcaacaagccacaagtccaacctactttg
atttgttgttttggattggactcgggaccttgtacatgcagacaactctt
agtaccactgagctacactccgagctgtaatataattttaaaggacagta
ctgattagttgttgctatgaaggcaaagagatttgcttttctttttttct
tttttctttctctctccgccacgggacaccaccccacccaccaaccccaa
ccccaacccccacccgggttgttttatggaaagacttgttggtcaagatc
agggtgatctggtgtaaaagtgtctcttgctgagcacattctggtattaa

gaattctgctgtgaaacaatctctcctagtaatggctgcacaagcaagac
tggaacagtggcagtatcaatggacatgcaaatgtggaagaggaaaattt
ttacaggatctcacctgtagacaaataaactatagacaacttatgatttc
tgggagacggagaatcagcttttcccaggcgtgagttccaccattggtta
gccaagtagagtgttcagccctgaaactatatacatataaacaacaaaaa
tggactcagaaggttttatttatatatttctgcatatacatatatctaca
tatgtacatatgtagcaataataatcaaaggaaaaaatagtctagtaaca
tgagggggggcgtgggagaattttgagggagcaaatggagagagaaagag
atataaagacagattttttggatgagagaaactgtctatttcagttaaaa
ataagtttttaaaaacttaactgaaaaaaacgaaataaatgaatgtatac
aaattaaaagaagatgcaaagttgaggatgtagctgagtgttcaaaccct
tgcctagcactgtcaagatcctggatttgatacttagcaaaaagtaagtt
aattaggtccttaccgtccttctcctcttccttctcttcctcctcttctt
cctcctcctcctcatcattatgattagtattatttactactgctactgat
tctgctactgctattactactactactactactactactactactactac
tactactatcactactactgctgctgctattgagacaaggtttgtctgta
gtccacgttgtccttgaactcaatatgaactttaaaatcctgaccatcct
gtctctacctcccaatgttgacattataggcatggtccaccctacctggc
attaataaatatatttttttaaagctgatactggcctggtggcaagacag
ctttctaattaccctactcgtcaatatgggtcagtctttatagagacaga
gaatctcaccctgataatcaaatgccctaagctttagtgtcactccccaa
ttcaataacaaggcaactggaaaaattgaattcagtcaactaatatcaga
gtgagtattactgagtatacaaggctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_135213922_135214873
seq2: B6Ng01-111K19.b_46_994 (reverse)

seq1  TAATACCAGAATGTGCCCAGCAGAGGACACTCTT-CACCAAGATCACCCT  49
      |||||||||||||||| |||||   |||||| || |||| ||||||||||
seq2  TAATACCAGAATGTGCTCAGCAAGAGACACTTTTACACC-AGATCACCCT  49

seq1  GATCTTGACCCAACAAAGTC-TTCCATAAAAACAACCGGGGTGGGGGTGG  98
      |||||||| ||||| ||||| |||||| ||||||||| |||||||||| |
seq2  GATCTTGA-CCAAC-AAGTCTTTCCAT-AAAACAACCCGGGTGGGGGTTG  96

seq1  GGGTGGGGGTGGGGTGGGGTGGGGTGGTGT-CCGTGGCGGAGAGAGAAAG  147
      |||| ||||| ||   |||||||||||||| |||||||||||||||||||
seq2  GGGTTGGGGTTGG--TGGGTGGGGTGGTGTCCCGTGGCGGAGAGAGAAAG  144

seq1  AAAAAAGAAAAAAAGAAAAGCAAATCTCTTTGCCTTCATAGCAACAACTA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAAAAAAAGAAAAGCAAATCTCTTTGCCTTCATAGCAACAACTA  194

seq1  ATCAGTACTGTCCTTTAAAATTATATTACAGCTCGGAGTGTAGCTCAGTG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTACTGTCCTTTAAAATTATATTACAGCTCGGAGTGTAGCTCAGTG  244

seq1  GTACTAAGAGTTGTCTGCATGTACAAGGTCCCGAGTCCAATCCAAAACAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTAAGAGTTGTCTGCATGTACAAGGTCCCGAGTCCAATCCAAAACAA  294

seq1  CAAATCAAAGTAGGTTGGACTTGTGGCTTGTTGAAATCAGTTGTCTATGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCAAAGTAGGTTGGACTTGTGGCTTGTTGAAATCAGTTGTCTATGG  344

seq1  ACACTGTGTTGAAAACCCTATCTGTAAATCAAATACTCGCAGGTTGGCCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTGTTGAAAACCCTATCTGTAAATCAAATACTCGCAGGTTGGCCA  394

seq1  AAAGCATGTCAGTTCTAGGACATTCTAGCCATTTTGATTCATTGCTGAAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATGTCAGTTCTAGGACATTCTAGCCATTTTGATTCATTGCTGAAT  444

seq1  ATTTTTCTTTCTCTTAAAACAAAATGGGCTCTCTAGGACTCCCTGCCATT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTTTCTCTTAAAACAAAATGGGCTCTCTAGGACTCCCTGCCATT  494

seq1  TTCACTATAGTTGAAAAATACAGATTCTCAAAAGTACTACCATTTGGCCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTATAGTTGAAAAATACAGATTCTCAAAAGTACTACCATTTGGCCC  544

seq1  GATTGTTTATTGAGTCTGCAATACTCCAATGCTAGGTTTATTTATTTGTA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTTATTGAGTCTGCAATACTCCAATGCTAGGTTTATTTATTTGTA  594

seq1  TGTAACGTTCCTGGGTTGGCTTCAGAGAGAGTCCTTGTGGCTTGCTCTAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACGTTCCTGGGTTGGCTTCAGAGAGAGTCCTTGTGGCTTGCTCTAG  644

seq1  GTATATTTTCACGGTTATTTATGTTCTTTAGCCTTTATGCTTGCAATATA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTTTCACGGTTATTTATGTTCTTTAGCCTTTATGCTTGCAATATA  694

seq1  TGAGCCACTTAATATTTGTGATTCCTAAAGATTTCAGGCTTAGCAGGAAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCACTTAATATTTGTGATTCCTAAAGATTTCAGGCTTAGCAGGAAT  744

seq1  CGATGGTTATTTTGTATATTGTTAATTCTTAAGTTTCTCCTTTACATATA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGGTTATTTTGTATATTGTTAATTCTTAAGTTTCTCCTTTACATATA  794

seq1  CAATTCAGATCTTCTTAGCCAGCTTCTTGGTCCACTAGTGCTAATATAAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCAGATCTTCTTAGCCAGCTTCTTGGTCCACTAGTGCTAATATAAT  844

seq1  GGGATGCATTTTAGTAGAACTTTAGAAATTGCCACACAATCTCCCTTTCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGCATTTTAGTAGAACTTTAGAAATTGCCACACAATCTCCCTTTCC  894

seq1  TTGAATTGAGTTGCCCACAGTCACTCATGACCTAAAAATATTATGTATAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTGAGTTGCCCACAGTCACTCATGACCTAAAAATATTATGTATAG  944

seq1  AATTC  952
      |||||
seq2  AATTC  949

seq1: chr2_135017084_135018229
seq2: B6Ng01-111K19.g_70_1197

seq1  GAATTCTGCTGTGAAACAATCTCTCCTAGTAATGGCTGCACAAGCAAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTGTGAAACAATCTCTCCTAGTAATGGCTGCACAAGCAAGAC  50

seq1  TGGAACAGTGGCAGTATCAATGGACATGCAAATGTGGAAGAGGAAAATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACAGTGGCAGTATCAATGGACATGCAAATGTGGAAGAGGAAAATTT  100

seq1  TTACAGGATCTCACCTGTAGACAAATAAACTATAGACAACTTATGATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGATCTCACCTGTAGACAAATAAACTATAGACAACTTATGATTTC  150

seq1  TGGGAGACGGAGAATCAGCTTTTCCCAGGCGTGAGTTCCACCATTGGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGACGGAGAATCAGCTTTTCCCAGGCGTGAGTTCCACCATTGGTTA  200

seq1  GCCAAGTAGAGTGTTCAGCCCTGAAACTATATACATATAAACAACAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGTAGAGTGTTCAGCCCTGAAACTATATACATATAAACAACAAAAA  250

seq1  TGGACTCAGAAGGTTTTATTTATATATTTCTGCATATACATATATCTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTCAGAAGGTTTTATTTATATATTTCTGCATATACATATATCTACA  300

seq1  TATGTACATATGTAGCAATAATAATCAAAGGAAAAAATAGTCTAGTAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTACATATGTAGCAATAATAATCAAAGGAAAAAATAGTCTAGTAACA  350

seq1  TGAGGGGGGGCGTGGGAGAATTTTGAGGGAGCAAATGGAGAGAGAAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGGGGCGTGGGAGAATTTTGAGGGAGCAAATGGAGAGAGAAAGAG  400

seq1  ATATAAAGACAGATTTTTTGGATGAGAGAAACTGTCTATTTCAGTTAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAGACAGATTTTTTGGATGAGAGAAACTGTCTATTTCAGTTAAAA  450

seq1  ATAAGTTTTTAAAAACTTAACTGAAAAAAACGAAATAAATGAATGTATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTTTTTAAAAACTTAACTGAAAAAAACGAAATAAATGAATGTATAC  500

seq1  AAATTAAAAGAAGATGCAAAGTTGAGGATGTAGCTGAGTGTTCAAACCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAAAGAAGATGCAAAGTTGAGGATGTAGCTGAGTGTTCAAACCCT  550

seq1  TGCCTAGCACTGTCAAGATCCTGGATTTGATACTTAGCAAAAAGTAAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGCACTGTCAAGATCCTGGATTTGATACTTAGCAAAAAGTAAGTT  600

seq1  AATTAGGTCCTTACCGTCCTTCTCCTCTTCCTTCTCTTCCTCCTCTTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGGTCCTTACCGTCCTTCTCCTCTTCCTTCTCTTCCTCCTCTTCTT  650

seq1  CCTCCTCCTCCTCATCATTATGATTAGTATTATTTACTACTGCTACTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCTCCTCATCATTATGATTAGTATTATTTACTACTGCTACTGAT  700

seq1  TCTGCTACTGCTATTACTACTACTACTACTACTACTACTACTACTACTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTACTGCTATTACTACTACTACTACTACTACTACTACTACTACTAC  750

seq1  TACTACTATCACTACTACTGCTGCTGCTATTGAGACAAGGTTTGTCTGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACTATCACTACTACTGCTGCTGCTATTGAGACAAGGTTTGTCTGTA  800

seq1  GTCCACGTTGTCCTTGAACTCAATATGAACTTTAAAATCCTGACCATCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACGTTGTCCTTGAACTCAATATGAACTTTAAAATCCTGACCATCCT  850

seq1  GTCTCTACCTCCCAAATGTTGACATTATAGGCATGGTCCACCCTACCTGG  900
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTCTCTACCTCCC-AATGTTGACATTATAGGCATGGTCCACCCTACCTGG  899

seq1  CATTAATAAATATA-TTTTTTAAAGCTGATACTGGGCTGGTGGCAGGACA  949
      |||||||||||||| |||||||||||||||||||| ||||||||| ||||
seq2  CATTAATAAATATATTTTTTTAAAGCTGATACTGGCCTGGTGGCAAGACA  949

seq1  GGCTTTCTAATTACCCTACTCCGTCAATATTGGTCAGTCTTTATAGAGGA  999
       ||||||||||||||||||| ||||||||| |||||||||||||||| ||
seq2  -GCTTTCTAATTACCCTACT-CGTCAATATGGGTCAGTCTTTATAGA-GA  996

seq1  CAGAGATCTTCACACTGATAAATCAAAATGCCCTAAGCTTTAGTGTCACT  1049
      ||||||   |||| ||||| |||| |||||||||||||||||||||||||
seq2  CAGAGAATCTCACCCTGAT-AATC-AAATGCCCTAAGCTTTAGTGTCACT  1044

seq1  CACCAATGCAATAAACAAAGCCAACTGAGAATATTAAATTTTAATTTCAA  1099
      | ||||| ||||||   ||| ||||||  || ||| ||  || | |   |
seq2  CCCCAATTCAATAA--CAAGGCAACTGGAAAAATTGAA--TTCAGT--CA  1088

seq1  ACTATATAATTCAGTAGTAGAGTATTTACTGAGTATACACAGGCTCC  1146
      |||| |||  |||| ||| ||||| |||||||||||||| |||||||
seq2  ACTA-ATA--TCAG-AGT-GAGTA-TTACTGAGTATACA-AGGCTCC  1128