BAC Information

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BAC

Clone NameB6Ng01-111O21
Chromosome2 (Build37)
Map Location 133,841,323 - 133,842,545
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043785, A430048G15Rik, Bmp2
Downstream geneHao1, Txndc13, LOC627897, LOC433478, Plcb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111O21.bB6Ng01-111O21.g
ACCDH918136DH918137
length1,1911,105
definitionDH918136|Mus musculus domesticus DNA, BAC clone: B6Ng01-111O21, 5' end.DH918137|Mus musculus domesticus DNA, BAC clone: B6Ng01-111O21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctaagcaacaaaaagcccaaggataattgtaatttgccaataat
tctcttgttggtaagaatagaagatactgagaaacagggacatcgggaag
tacgtcagccagtcgttcaaagggaaaaccaggaggcattcaaaaccaga
ctatcataggaaaatgacttgaaatgaaatcattggccctgatgaaagag
ttgatttgagaaaggtaatatttactattgtatatccttggacttggttt
gctcaacatacattctaaatatgacaatttgtaaggtatttgaaggctct
gtctactaaatagggagaaaagacgctttggagggaaacccacacctgtc
cgcaagaccactgcattgacttatagaggttttgttctctaattaacttc
ggaggtgatcatagtgccaaagcacacaaacatcgtctaaggttatcaaa
ggttacttcctgggagtctcttcccaaatgtagatcactgactgatagct
ttctgcctgctgcaacaatgcttctgagagcacatatttcatattagagt
agttcctttgcttctgtctatggtgaggatctcagaaggaaacagttctg
aatattcctagttctgacgctgaggtaagtataatgcaggaaccagaatt
aaagtaacggaacatacaagacagttgtaggaggcttctttcttctagga
gcccattctttctagaaattgaatcatcagatggtagttctagtcgtgtc
tctgatgcttgtcggttggggtcgaagatctagtcaaagcgaggagagaa
gtacacatctccagcagcctttagcattcctcccaaaggcatcgcacaat
agattcagatttctaccaaagctaaatctacaactaaagtggtccagtaa
gaacaacacacagattcctgctgggccaagaatatgaagaatgggctttc
caaatgatactcagaatatctgtaaaaggatctcctgagctactgatagg
taaaggatgctgaaaagacttggcagttcgtagttggttgttggctttgt
ttggttgtgcagtgttgttcttctttctttgccgttattcctcacctggt
caaaactaaggtctactacttaatgaatcggtagggagagtctgcttaac
caattgttagcacacgtggtttttaaaattagagtgaaaaa
gaattctggtggaggtggggacatcctcatggagaggtggggtgtggagg
gtctggtcgaggggaagaggtatgggctatggaacagagtggaccaggca
gaggataaaatctggagtgaagaaaaaaaggttaaataaaattttataaa
gaaaaggaaaggaaaagaaaagaaagaaagaaagaaagaaagaaagaaga
gaagagaagagaagagaagagaaaagaaaagaaaagaaaagaaaagaaaa
gaagagaaaagaaaagaaaggaaaagaagagaaaaggtagtacaatgtgg
gaatcattgaagggtttatgggagatcagcttgggagcttgcagatcaat
ggggtgaatgagtccttgtggctgaccaggggtcctaccatgtccacaca
tgctatatagaaaagctatagtttgggttgcctgatttttttttcttcag
gttttagtccaatagaataaaggattaaagagaaagggggcatttgggta
aaatcacatgggaccccatttagatttggtttcctataaataatcacaat
tggggattttatttctttcccctttttaatataaccaaaaaattgccttt
ggtaaaaatttaaacccaaaccaattattatttctggtatttggtacacc
aaattttttcctgtaaccccttatgcctgccctatggcaccaaaatccct
ccagcaagagaaaccctgttttttctctttttccatttaaatatttccct
ttatataaccaaattctggccaaatttattacctgggctttttctaaaaa
actccaatctttttttattgggtggtttaaaaccccctcttacccccctt
tttttgggggaaaaaggggtattctctaaaaggggtggggcaatgggaat
tccccaaaaaaacgctatttctctcatattttttatatagagagattctc
tccaccaaaaaaaacaccccccgcgtgtccacaacatgtctttttatata
tattgtggtgcgcaagacaaagccccacaggggccccacccctctacgtg
agtgtgtgtcctctactgggggtggtagggatcatattacaacatatctt
ccttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_133841323_133842545
seq2: B6Ng01-111O21.b_47_1237

seq1  GAATTCCTAAGCAACAAAAAGCCCAAGGATAATTGTAATTTGCCAATAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAGCAACAAAAAGCCCAAGGATAATTGTAATTTGCCAATAAT  50

seq1  TCTCTTGTTGGTAAGAATAGAAGATACTGAGAAACAGGGACATCGGGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGTTGGTAAGAATAGAAGATACTGAGAAACAGGGACATCGGGAAG  100

seq1  TACGTCAGCCAGTCGTTCAAAGGGAAAACCAGGAGGCATTCAAAACCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTCAGCCAGTCGTTCAAAGGGAAAACCAGGAGGCATTCAAAACCAGA  150

seq1  CTATCATAGGAAAATGACTTGAAATGAAATCATTGGCCCTGATGAAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATAGGAAAATGACTTGAAATGAAATCATTGGCCCTGATGAAAGAG  200

seq1  TTGATTTGAGAAAGGTAATATTTACTATTGTATATCCTTGGACTTGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTGAGAAAGGTAATATTTACTATTGTATATCCTTGGACTTGGTTT  250

seq1  GCTCAACATACATTCTAAATATGACAATTTGTAAGGTATTTGAAGGCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAACATACATTCTAAATATGACAATTTGTAAGGTATTTGAAGGCTCT  300

seq1  GTCTACTAAATAGGGAGAAAAGACGCTTTGGAGGGAAACCCACACCTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACTAAATAGGGAGAAAAGACGCTTTGGAGGGAAACCCACACCTGTC  350

seq1  CGCAAGACCACTGCATTGACTTATAGAGGTTTTGTTCTCTAATTAACTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAAGACCACTGCATTGACTTATAGAGGTTTTGTTCTCTAATTAACTTC  400

seq1  GGAGGTGATCATAGTGCCAAAGCACACAAACATCGTCTAAGGTTATCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTGATCATAGTGCCAAAGCACACAAACATCGTCTAAGGTTATCAAA  450

seq1  GGTTACTTCCTGGGAGTCTCTTCCCAAATGTAGATCACTGACTGATAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACTTCCTGGGAGTCTCTTCCCAAATGTAGATCACTGACTGATAGCT  500

seq1  TTCTGCCTGCTGCAACAATGCTTCTGAGAGCACATATTTCATATTAGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCTGCTGCAACAATGCTTCTGAGAGCACATATTTCATATTAGAGT  550

seq1  AGTTCCTTTGCTTCTGTCTATGGTGAGGATCTCAGAAGGAAACAGTTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTTTGCTTCTGTCTATGGTGAGGATCTCAGAAGGAAACAGTTCTG  600

seq1  AATATTCCTAGTTCTGACGCTGAGGTAAGTATAATGCAGGAACCAGAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCCTAGTTCTGACGCTGAGGTAAGTATAATGCAGGAACCAGAATT  650

seq1  AAAGTAACGGAACATACAAGACAGTTGTAGGAGGCTTCTTTCTTCTAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAACGGAACATACAAGACAGTTGTAGGAGGCTTCTTTCTTCTAGGA  700

seq1  GCCCATTCTTTCTAGAAATTGAATCATCAGATGGTAGTTCTAGTCGTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATTCTTTCTAGAAATTGAATCATCAGATGGTAGTTCTAGTCGTGTC  750

seq1  TCTGATGCTTGTCGGTTGGGGTCGAAGATCTAGTCAAAGCGAGGAGAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATGCTTGTCGGTTGGGGTCGAAGATCTAGTCAAAGCGAGGAGAGAA  800

seq1  GTACACATCTCCAGCAGCCTTTAGCATTCCTCCCAAAGGCATCGCACAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACATCTCCAGCAGCCTTTAGCATTCCTCCCAAAGGCATCGCACAAT  850

seq1  AGATTCAGATTTCTACCAAAGCTAAATCTACAACTAAAGTGGTCCAGTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCAGATTTCTACCAAAGCTAAATCTACAACTAAAGTGGTCCAGTAA  900

seq1  GAACAACACACAGATTCCTGCTGGGCCAAGAATATGAAGAATGGGCTTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAACACACAGATTCCTGCTGGGCCAAGAATATGAAGAATGGGCTTTC  950

seq1  CAAATGATAACTCAGAAATATCTGTAAAAGGATCTCCTGAGCTACTGATA  1000
      |||||||| |||||| ||||||||||||||||||||||||||||||||||
seq2  CAAATGAT-ACTCAG-AATATCTGTAAAAGGATCTCCTGAGCTACTGATA  998

seq1  GGTTAAAGGATTGCTGAAAAGACTTGGCAGTT-TTGGTTGGTTTGGTTTG  1049
      || ||||||| |||||||||||||||||||||  | |||||      |||
seq2  GG-TAAAGGA-TGCTGAAAAGACTTGGCAGTTCGTAGTTGG------TTG  1040

seq1  TTTGCTTTTGTTTTGTTGTTGCAGTTGTTTGTTTCTTTCTTTCTTTTGCT  1099
      || || ||||||| |||| ||||||   |||||   ||||||| ||||| 
seq2  TTGGC-TTTGTTTGGTTG-TGCAGT--GTTGTT--CTTCTTTC-TTTGCC  1083

seq1  GTTATTTCCTTCACTCTTGTCAATACTAAGTGTCTATCTAACCTTAAATG  1149
      ||||||  | |||| || ||||| |||||| ||||| |||  |||||   
seq2  GTTATT--CCTCAC-CTGGTCAAAACTAAG-GTCTA-CTA--CTTAATGA  1126

seq1  ATCGTGTAAGGAGATGTCTGCTTTTAAATCATATTTGTTATGCA-ACCTG  1198
      |||| ||| ||||| ||||||||   || |  | |||||| ||| || ||
seq2  ATCG-GTAGGGAGA-GTCTGCTT---AACC--AATTGTTA-GCACACGTG  1168

seq1  TGTTTTTATAAATTAGAGTGAAAAA  1223
       ||||||| ||||||||||||||||
seq2  -GTTTTTA-AAATTAGAGTGAAAAA  1191