BAC Information

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BAC

Clone NameB6Ng01-111P22
Chromosome2 (Build37)
Map Location 71,021,056 - 71,022,099
singlet/doubletsinglet
Overlap genenone
Upstream geneMyo3b, LOC100040021, Sp5, 4933404M02Rik, LOC100040068, Gad1, LOC100039766, Gorasp2, Tlk1, Mettl8, 4833418A01Rik, Cybrd1
Downstream geneDync1i2, Slc25a12, LOC667528, Hat1, LOC100040177, Metapl1, LOC100040207, Dlx1, Dlx1as, Dlx2, Gm1631, Itga6, Pdk1, Rapgef4, LOC100040270
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111P22.bB6Ng01-111P22.g
ACCDH918183DH918184
length1281,035
definitionDH918183|Mus musculus domesticus DNA, BAC clone: B6Ng01-111P22, 5' end.DH918184|Mus musculus domesticus DNA, BAC clone: B6Ng01-111P22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaatgtgttctctctctctctttttctctctctctctctctct
ctctgaggcaccttcataggagggaattcacacctggtactgtgcaagca
aacctggtcaaaaacacatggatgggaa
gaattccatgaaactgctgttttggtaacatcctcgtcccatgactaccc
ctgcagacaaatgtctgttgcattgttgaaagcctgactgcttttgacta
gctggcaaataaccaccccagtcaagattggtgacctggcctccagtggt
gggagttggtgcccattttctgtttgtgagggtatatgttgggtgtggcc
tgaccttactacttagtagcttccataaacagaggctccctgagactata
gtccatgtgaggctgatgtgggccatcccagggcaaacagtcatcaccac
cagcaaatgtaaccccacagaactatggggaacagaggctagcccacacc
agccccctcctctatttgtgcctttaatggtttttgccagcaccaaatca
gatatttgatagaactgatatttcaggagaaaggaaaagtttcctcccag
tggggacccctaccccagtgacctggtatgtctgatcccactcacagctg
atctccagaactgtcattttcattgaattgctaactatgcaaacccttgt
tacttgttttatgttataaatgatcaccatttccattttgctttctcaaa
gaatatggaggttacatttaagaaagcaactgccaggggccagagagatg
acgcttccagaggatgggttcaaatcccggcacccccatggcagctcaca
actgtctgtgactccagttccacgagacgcaacacgctcatacaggcaca
catgcaggcaaaatatcaatgaacataaaattaaaaaattaaaaataaaa
aataaaagcaatgactacagagcaattaaaaaaagagaaatgctaaattg
acattttaaaacgatgctaatgcaaggactgcttgaagggagaagtcagt
ttgtcaatgttttttctttgaaaggccaccctcttcatccattctccttg
gcccactccaagaaggatcatgtagaaatgtctccagtgctaggttgggt
atagtaccttcgtggtctgtatgctataatacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_71021056_71022099
seq2: B6Ng01-111P22.g_67_1101 (reverse)

seq1  AAAGTA-TATAGCAATACAGACACACGAGGGTACTATACCCAACCCTAGC  49
      |||||| |||||| |||||||| ||||| |||||||||||||| ||||||
seq2  AAAGTATTATAGC-ATACAGAC-CACGAAGGTACTATACCCAA-CCTAGC  47

seq1  CAACTGGGAGACATTTTCTAACATGATCCTTCTTGGAGTTGGGCCAAAGG  99
        ||| ||||||| ||||| |||||||||||||||||| ||||||||  |
seq2  --ACT-GGAGACA-TTTCT-ACATGATCCTTCTTGGAG-TGGGCCAA--G  89

seq1  GAGAATGGATGAAGAGGGTGGCCTTTCAAAG-AAAAACATTGACAAACTG  148
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAGAATGGATGAAGAGGGTGGCCTTTCAAAGAAAAAACATTGACAAACTG  139

seq1  ACTTCTCCCTTCAAGCAGTCCTTGCATTAGCATCGTTTTAAAATGTCAAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCCCTTCAAGCAGTCCTTGCATTAGCATCGTTTTAAAATGTCAAT  189

seq1  TTAGCATTTCTCTTTTTTTAATTGCTCTGTAGTCATTGCTTTTATTTTTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATTTCTCTTTTTTTAATTGCTCTGTAGTCATTGCTTTTATTTTTT  239

seq1  ATTTTTAATTTTTTAATTTTATGTTCATTGATATTTTGCCTGCATGTGTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAATTTTTTAATTTTATGTTCATTGATATTTTGCCTGCATGTGTG  289

seq1  CCTGTATGAGCGTGTTGCGTCTCGTGGAACTGGAGTCACAGACAGTTGTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATGAGCGTGTTGCGTCTCGTGGAACTGGAGTCACAGACAGTTGTG  339

seq1  AGCTGCCATGGGGGTGCCGGGATTTGAACCCATCCTCTGGAAGCGTCATC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCATGGGGGTGCCGGGATTTGAACCCATCCTCTGGAAGCGTCATC  389

seq1  TCTCTGGCCCCTGGCAGTTGCTTTCTTAAATGTAACCTCCATATTCTTTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGCCCCTGGCAGTTGCTTTCTTAAATGTAACCTCCATATTCTTTG  439

seq1  AGAAAGCAAAATGGAAATGGTGATCATTTATAACATAAAACAAGTAACAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCAAAATGGAAATGGTGATCATTTATAACATAAAACAAGTAACAA  489

seq1  GGGTTTGCATAGTTAGCAATTCAATGAAAATGACAGTTCTGGAGATCAGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGCATAGTTAGCAATTCAATGAAAATGACAGTTCTGGAGATCAGC  539

seq1  TGTGAGTGGGATCAGACATACCAGGTCACTGGGGTAGGGGTCCCCACTGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTGGGATCAGACATACCAGGTCACTGGGGTAGGGGTCCCCACTGG  589

seq1  GAGGAAACTTTTCCTTTCTCCTGAAATATCAGTTCTATCAAATATCTGAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAACTTTTCCTTTCTCCTGAAATATCAGTTCTATCAAATATCTGAT  639

seq1  TTGGTGCTGGCAAAAACCATTAAAGGCACAAATAGAGGAGGGGGCTGGTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGCTGGCAAAAACCATTAAAGGCACAAATAGAGGAGGGGGCTGGTG  689

seq1  TGGGCTAGCCTCTGTTCCCCATAGTTCTGTGGGGTTACATTTGCTGGTGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTAGCCTCTGTTCCCCATAGTTCTGTGGGGTTACATTTGCTGGTGG  739

seq1  TGATGACTGTTTGCCCTGGGATGGCCCACATCAGCCTCACATGGACTATA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGACTGTTTGCCCTGGGATGGCCCACATCAGCCTCACATGGACTATA  789

seq1  GTCTCAGGGAGCCTCTGTTTATGGAAGCTACTAAGTAGTAAGGTCAGGCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGGGAGCCTCTGTTTATGGAAGCTACTAAGTAGTAAGGTCAGGCC  839

seq1  ACACCCAACATATACCCTCACAAACAGAAAATGGGCACCAACTCCCACCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCAACATATACCCTCACAAACAGAAAATGGGCACCAACTCCCACCA  889

seq1  CTGGAGGCCAGGTCACCAATCTTGACTGGGGTGGTTATTTGCCAGCTAGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGCCAGGTCACCAATCTTGACTGGGGTGGTTATTTGCCAGCTAGT  939

seq1  CAAAAGCAGTCAGGCTTTCAACAATGCAACAGACATTTGTCTGCAGGGGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCAGTCAGGCTTTCAACAATGCAACAGACATTTGTCTGCAGGGGT  989

seq1  AGTCATGGGACGAGGATGTTACCAAAACAGCAGTTTCATGGAATTC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGGGACGAGGATGTTACCAAAACAGCAGTTTCATGGAATTC  1035