BAC Information

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BAC

Clone NameB6Ng01-112K05
Chromosome2 (Build37)
Map Location 141,312,283 - 141,493,284
singlet/doubletdoublet
Overlap genenone
Upstream geneFlrt3
Downstream geneLOC668913, LOC668914, Kif16b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112K05.bB6Ng01-112K05.g
ACCDH918651DH918652
length1641,127
definitionDH918651|Mus musculus domesticus DNA, BAC clone: B6Ng01-112K05, 5' end.DH918652|Mus musculus domesticus DNA, BAC clone: B6Ng01-112K05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,312,283 - 141,312,446)(141,492,146 - 141,493,284)
sequence
aattgtaactgatttaaatttgcaactttgtgttccatttccccagccat
aaagtcactaaccttcctattgtcacactctcctttccatctggttttcc
tcacaagttccctttcacacatttttttgggggggaaagggggcagggag
gaaggtgaaggtga
gaattcatggaagtttacttaaagaaatcatttcaggattataaagattc
aaagagcagttggctgaatctacctccacggttaggcataaatttaagca
agagtggatttctgtttaatggatagcgaccaagaataaccaaagggaaa
caaataaaaccataataattcagcggttattaatggagctgtctaggggg
aagttaatcacttatgtcagtgatcacatccattctcaagaggatgttca
gacaggtctgggagaggtacttagacacacataggaaaacagactagtct
gtccctatagtttgctcaaataaacccaggtcatactgaattctgcatgc
atgtcactcactcatacagttagaatgtgatcatgccctaggccttcttg
gggagcctaccattttgaaattatttcattggcttcttgctaaatacaaa
tggatacatcatacttacaggagaatcctttcgatggttcaagtccataa
aataatcaacacatttcaaaactcactgaccatcattctttaagaggtca
aagttatatcatgcgaagttgaatacaatttaacaaagtcctgttttagt
ttttcatgggcttaatctgtcacatatacctatggtcattacacatactg
agtctcctatcgtattctaatgttcctcctatccaatgcaagtacttgaa
aatactatgcgtcaaggatgtccctcaatgcattgattatgaaatccttc
aaatcatctctggcttcaacactttccttgtctccactacaccctgattc
agtcatctcataatattccatgagatagtatcatgtcctcatggcaactt
gtcaaataagagagtcaaattaaaggagccttgttttctttaattaagat
ccgacacatatactagctaggtttgggaaagactccatactcactcgcca
aggtacagaaagaataaatgttgattgtatctggtgaattctacattttc
agcagaggatgtggccaggaaaacttcatttcatactatgactgagtact
tatatatgactcaaagatagaaagaactgccacatttcacaagtaaggac
ctacctcagcatttaagtgtcctagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_141312283_141312446
seq2: B6Ng01-112K05.b_50_213

seq1  AATTGTAACTGATTTAAATTTGCAACTTTGTGTTCCATTTCCCCAGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTAACTGATTTAAATTTGCAACTTTGTGTTCCATTTCCCCAGCCAT  50

seq1  AAAGTCACTAACCTTCCTATTGTCACACTCTCCTTTCCATCTGGTTTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCACTAACCTTCCTATTGTCACACTCTCCTTTCCATCTGGTTTTCC  100

seq1  TCACAAGTTCCCTTTCACACATTTTTTTGGGGGGGAAAGGGGGCAGGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGTTCCCTTTCACACATTTTTTTGGGGGGGAAAGGGGGCAGGGAG  150

seq1  GAAGGTGAAGGTGA  164
      ||||||||||||||
seq2  GAAGGTGAAGGTGA  164

seq1: chr2_141492146_141493284
seq2: B6Ng01-112K05.g_67_1193 (reverse)

seq1  TGCTAGGGACACTTTAAATGCTGAGGTAGGGTCTATACTTGTGAAAACTG  50
      ||||| |||||| ||||||||||||||| ||||  |||||||||||  ||
seq2  TGCTA-GGACAC-TTAAATGCTGAGGTA-GGTCCTTACTTGTGAAATGTG  47

seq1  TGCAGTTCTTTCTATCTTTGAAGTCATAATTAATAAGTACTCAGTCATAG  100
       ||||||||||||||||||| |||||||    ||||||||||||||||||
seq2  -GCAGTTCTTTCTATCTTTG-AGTCATA---TATAAGTACTCAGTCATAG  92

seq1  TATGAAATGAAGTTTTCTTGGCCCACATTCCTCTTGCTGAAAATGTAGAA  150
      ||||||||||||||||| ||| ||||| ||||| ||||||||||||||||
seq2  TATGAAATGAAGTTTTCCTGG-CCACA-TCCTC-TGCTGAAAATGTAGAA  139

seq1  TTCACCAGATACAATCAACATTTATTCTTTCTTGTACCTTGGCGAGTGAG  200
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTCACCAGATACAATCAACATTTATTCTTTC-TGTACCTTGGCGAGTGAG  188

seq1  TATGGAGTCTTTCCCAAACCTAGCTAGTATATGTGTCGGATCTTAATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAGTCTTTCCCAAACCTAGCTAGTATATGTGTCGGATCTTAATTAA  238

seq1  AGAAAACAAGGCTTCCTTAATTTGACTCTCTTATTTGACAAGTTGCCATG  300
      ||||||||||||| | ||||||||||||||||||||||||||||||||||
seq2  AGAAAACAAGGCTCCTTTAATTTGACTCTCTTATTTGACAAGTTGCCATG  288

seq1  AGGACATGATACTATCTCATGGAATATTATGAGATGACTGAATCAGGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATGATACTATCTCATGGAATATTATGAGATGACTGAATCAGGGTG  338

seq1  TAGTGGAGACAAGGAAAGTGTTGAAGCCAGAGATGATTTGAAGGATTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGAGACAAGGAAAGTGTTGAAGCCAGAGATGATTTGAAGGATTTCA  388

seq1  TAATCAATGCATTGAGGGACATCCTTGACGCATAGTATTTTCAAGTACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAATGCATTGAGGGACATCCTTGACGCATAGTATTTTCAAGTACTT  438

seq1  GCATTGGATAGGAGGAACATTAGAATACGATAGGAGACTCAGTATGTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGGATAGGAGGAACATTAGAATACGATAGGAGACTCAGTATGTGTA  488

seq1  ATGACCATAGGTATATGTGACAGATTAAGCCCATGAAAAACTAAAACAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCATAGGTATATGTGACAGATTAAGCCCATGAAAAACTAAAACAGG  538

seq1  ACTTTGTTAAATTGTATTCAACTTCGCATGATATAACTTTGACCTCTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTTAAATTGTATTCAACTTCGCATGATATAACTTTGACCTCTTAA  588

seq1  AGAATGATGGTCAGTGAGTTTTGAAATGTGTTGATTATTTTATGGACTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGATGGTCAGTGAGTTTTGAAATGTGTTGATTATTTTATGGACTTG  638

seq1  AACCATCGAAAGGATTCTCCTGTAAGTATGATGTATCCATTTGTATTTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCGAAAGGATTCTCCTGTAAGTATGATGTATCCATTTGTATTTAG  688

seq1  CAAGAAGCCAATGAAATAATTTCAAAATGGTAGGCTCCCCAAGAAGGCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAGCCAATGAAATAATTTCAAAATGGTAGGCTCCCCAAGAAGGCCT  738

seq1  AGGGCATGATCACATTCTAACTGTATGAGTGAGTGACATGCATGCAGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATGATCACATTCTAACTGTATGAGTGAGTGACATGCATGCAGAAT  788

seq1  TCAGTATGACCTGGGTTTATTTGAGCAAACTATAGGGACAGACTAGTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTATGACCTGGGTTTATTTGAGCAAACTATAGGGACAGACTAGTCTG  838

seq1  TTTTCCTATGTGTGTCTAAGTACCTCTCCCAGACCTGTCTGAACATCCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTATGTGTGTCTAAGTACCTCTCCCAGACCTGTCTGAACATCCTC  888

seq1  TTGAGAATGGATGTGATCACTGACATAAGTGATTAACTTCCCCCTAGACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAATGGATGTGATCACTGACATAAGTGATTAACTTCCCCCTAGACA  938

seq1  GCTCCATTAATAACCGCTGAATTATTATGGTTTTATTTGTTTCCCTTTGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCATTAATAACCGCTGAATTATTATGGTTTTATTTGTTTCCCTTTGG  988

seq1  TTATTCTTGGTCGCTATCCATTAAACAGAAATCCACTCTTGCTTAAATTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTTGGTCGCTATCCATTAAACAGAAATCCACTCTTGCTTAAATTT  1038

seq1  ATGCCTAACCGTGGAGGTAGATTCAGCCAACTGCTCTTTGAATCTTTATA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTAACCGTGGAGGTAGATTCAGCCAACTGCTCTTTGAATCTTTATA  1088

seq1  ATCCTGAAATGATTTCTTTAAGTAAACTTCCATGAATTC  1139
      |||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGAAATGATTTCTTTAAGTAAACTTCCATGAATTC  1127