BAC Information

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BAC

Clone NameB6Ng01-113F10
Chromosome2 (Build37)3 (Build37)
Map Location 142,776,273 - 142,776,81516,052,265 - 16,052,878
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113F10.bB6Ng01-113F10.g
ACCDH919160DH919161
length960616
definitionDH919160|Mus musculus domesticus DNA, BAC clone: B6Ng01-113F10, 5' end.DH919161|Mus musculus domesticus DNA, BAC clone: B6Ng01-113F10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,273 - 142,776,815)(16,052,265 - 16,052,878)
sequence
gaattctttgttcagctctgagccccatcttttaagggggttatttgatt
ttctggagtccaccctcttgagttctctatatatattggatattagtccc
ctatctgatttatgataggtaaagatccttttccaatctgttggtggcct
ttttgtcttattgacagtgtcttttgccttacagaagctttgcagtttca
tgaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtgtctctggttttacgtgaagttccttgatccact
tagatttgaccttagttcaaggagataggaatggatcgattcgcattctt
ctacatgataacagccagttgtgccagcaccatttgttgaaaatgctgtc
tttcttccactggatggttttagctcccttgtcgaagatcaagtgaccat
aggtgtgtgcgttcatttctgggtcttcaattctattccattggtctact
tgtctgtcactataccagcaccatgcagtttttataacaactgctctgta
gtaaagctttaggtcaggcatggtgattccaccagaggtacttttatcct
tgagagagcttttgctaccctaggatttttgttattccagatgaatttgc
agattgctctttctaattcgttgaagaattgatttgggaatttttgatgg
ggattgcattgaatctgtagattgcttttgacaagatagccattttttac
tttattgatcctgccaatccatgagcatgggagatctttcaatcttctga
gatcttctttatttctttctcagaaacttgaaggttttatcatacagatt
tttcacttttcttagtcagagtcacgccaagatagtaaactatttgtgac
tattgagaat
gaattcatgccttcagggtgtctcctacttctttcagcctcctcagtttc
ctcaaatggtgcttttgaagaaggaaaggcagtcagatctagaaacagtc
cccctgatttcacaagctagacaaatccaggacctacacaccattagaaa
taaaagttaaggaagaaaacccatcccattaataccctagttcctagaga
tggggttcaatggtggctcacttgcctgccacatagtgcttctgctgcag
caagtccgtcttcagatggctcttgtctggttctagatcatactggaggt
tttcaaaccttcaggaggaaggcagctggaacacagccctgttagtaagc
agacatgccagctgttgagccgtccccagctctgtaaactatccagtatt
atctttcaacctaggttagtccctccatccctaaggaaaatgttcagaga
gaaactgtcctaatttttttttctcagttttaaaaaactgttagaagttg
aaatgttatgaaaaacataaaatttctccatggtccagaaaacattattt
ttggggaaaaaaaaatcagcatagcaatgtctcagtcacacttcagtgtg
agctatatggtaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776273_142776815
seq2: B6Ng01-113F10.b_465_1006 (reverse)

seq1  TTCTCAATAGTCACAAATAATATAAAATATCTCGGCGTGACTCTAACTAA  50
      ||||||||||||||||||| | |  | ||||| ||||||||||| |||||
seq2  TTCTCAATAGTCACAAATAGTTT--ACTATCTTGGCGTGACTCTGACTAA  48

seq1  G-GAAGTGAAAGATCTGTATGATAAAAACTTCAAGTCTCTGAAGAAAGAA  99
      |  |||||||| ||||||||||||||| |||||||| |||| ||||||||
seq2  GAAAAGTGAAAAATCTGTATGATAAAACCTTCAAGTTTCTG-AGAAAGAA  97

seq1  ATTAAAGAAGATCTCAGAAGATGGAAGGATCTCCCATGCTCATGGATTGG  149
      | |||||||||||||||||||| ||| |||||||||||||||||||||||
seq2  A-TAAAGAAGATCTCAGAAGATTGAAAGATCTCCCATGCTCATGGATTGG  146

seq1  CAGGATCAACATTGT-AAAAATGGCTATCTTGCCAAAAGCAATCTACAGA  198
      ||||||||| |  || |||||||||||||||| |||||||||||||||||
seq2  CAGGATCAATAAAGTAAAAAATGGCTATCTTGTCAAAAGCAATCTACAGA  196

seq1  TTCAATGCAATCCCCATCAAAA--TTCCAACTCAATTCTTCAACGAATTA  246
      ||||||||||||||||||||||  | |||| |||||||||||||||||||
seq2  TTCAATGCAATCCCCATCAAAAATTCCCAAATCAATTCTTCAACGAATTA  246

seq1  GAAGGAGCAATTTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGC  296
      ||| ||||||| |||||||||||||||||||||||||| |||||| ||||
seq2  GAAAGAGCAATCTGCAAATTCATCTGGAATAACAAAAATCCTAGGGTAGC  296

seq1  AAAAAGTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTG  346
      ||||  || ||||||||||||||| |||||||||||||||||||||||||
seq2  AAAAGCTC-TCTCAAGGATAAAAGTACCTCTGGTGGAATCACCATGCCTG  345

seq1  ACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGG  396
      ||||||||||||||||||||||| |||| |||||||||||||||| ||||
seq2  ACCTAAAGCTTTACTACAGAGCAGTTGTTATAAAAACTGCATGGTGCTGG  395

seq1  TATAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAAT  446
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAAT  445

seq1  GAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCA  496
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCA  495

seq1  TCCAGAGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAAC  543
      ||||| ||||||||||||||||||||||||| |||||||||||||||
seq2  TCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCTGGCACAAC  542

seq1: chr3_16052265_16052878
seq2: B6Ng01-113F10.g_74_688

seq1  GAATTCATGCCTTCAGGGTGTCTCCTACTTCTTTCAGCCTCCTCAGTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGCCTTCAGGGTGTCTCCTACTTCTTTCAGCCTCCTCAGTTTC  50

seq1  CTCAAATGGTGCTTTTGAAGAAGGAAAGGCAGTCAGATCTAGAAACAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATGGTGCTTTTGAAGAAGGAAAGGCAGTCAGATCTAGAAACAGTC  100

seq1  CCCCTGATTTCACAAGCTAGACAAATCCAGGACCTACACACCATTAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGATTTCACAAGCTAGACAAATCCAGGACCTACACACCATTAGAAA  150

seq1  TAAAAGTTAAGGAAGAAAACCCATCCCATTAATACCCTAGTTCCTAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTTAAGGAAGAAAACCCATCCCATTAATACCCTAGTTCCTAGAGA  200

seq1  TGGGGTTCAATGGTGGCTCACTTGCCTGCCACATAGTGCTTCTGCTGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTCAATGGTGGCTCACTTGCCTGCCACATAGTGCTTCTGCTGCAG  250

seq1  CAAGTCCGTCTTCAGATGGCTCTTGTCTGGTTCTAGATCATACTGGAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCCGTCTTCAGATGGCTCTTGTCTGGTTCTAGATCATACTGGAGGT  300

seq1  TTTCAAACCTTCAGGAGGAAGGCAGCTGGAACACAGCCCTGTTAGTAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAACCTTCAGGAGGAAGGCAGCTGGAACACAGCCCTGTTAGTAAGC  350

seq1  AGACATGCCAGCTGTTGAGCCGTCCCCAGCTCTGTAAACTATCCAGTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGCCAGCTGTTGAGCCGTCCCCAGCTCTGTAAACTATCCAGTATT  400

seq1  ATCTTTCAACCTAGGTTAGTCCCTCCATCCCTAAGGAAAATGTTCAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCAACCTAGGTTAGTCCCTCCATCCCTAAGGAAAATGTTCAGAGA  450

seq1  GAAACTGTCCTAATTTTTTTTTCTCAGTTTTAAAAAACTGTTAGAAGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGTCCTAATTTTTTTTTCTCAGTTTTAAAAAACTGTTAGAAGTTG  500

seq1  AAATGTTATGAAAAACATAAAATTTCTCCATGGTCCAG-AAACATTATTT  549
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAATGTTATGAAAAACATAAAATTTCTCCATGGTCCAGAAAACATTATTT  550

seq1  TTGGGGAAAAAAAAATCAGCATAGCAATGTCTCAGTCACACTTCAGGGTG  599
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTGGGGAAAAAAAAATCAGCATAGCAATGTCTCAGTCACACTTCAGTGTG  600

seq1  AGCTATATGGTAAAA  614
      |||||||||||||||
seq2  AGCTATATGGTAAAA  615