BAC Information

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BAC

Clone NameB6Ng01-113F18
Chromosome2 (Build37)
Map Location 157,696,605 - 157,829,454
singlet/doubletdoublet
Overlap geneCtnnbl1, LOC100043681, Gm691, 2610036D13Rik
Upstream gene1110008F13Rik, Sla2, LOC100043880, Ndrg3, LOC668943, Dsn1, 9830001H06Rik, Gm1332, Samhd1, Rbl1, LOC100043882, 4922505G16Rik, Rpn2, Ghrh, LOC100043678, Manbal, Src, Blcap, Nnat
Downstream gene2610304G08Rik, Tgm2, D630003M21Rik, Bpi, Lbp, 9430008C03Rik, A930034L06Rik, B230339M05Rik, LOC628935, BC054059, LOC545481, Slc32a1, Actr5, Ppp1r16b, 2310007D09Rik, Dhx35, LOC100043891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113F18.bB6Ng01-113F18.g
ACCDH919175DH919176
length153858
definitionDH919175|Mus musculus domesticus DNA, BAC clone: B6Ng01-113F18, 5' end.DH919176|Mus musculus domesticus DNA, BAC clone: B6Ng01-113F18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(157,829,302 - 157,829,454)(157,696,605 - 157,697,458)
sequence
tgatgtctttggtaatctgaaggaggaatgtcaaaacatcctgtgtagca
ctttgtaagtagaaggttggggtccacattacagtaaggaaatatggaca
gttgaggtgtctgggacattgtctgggacattgtgtgttggggtgggggg
gtg
gaattctcaggagccccaaaggggccggcaggaggggccccagaggggcc
cgcactccttctttgttccagggcacatgttcaagctgctgcatgctggc
tgatgccgtgttctcagcagcacctctgtctgctctgagcatgtcctgat
gctcatccccatgtcagaagtggcggtgtggccttcctttgcaggcagtg
tgctcatccctcctctccctgcctgtggctctctttcaggttgacagact
aatggagctgcattttaaatatctcagcgcaatgcaggtggccgacaaga
agattgaaggggagaaacatgtacgtaccctgcccacttcttgacagtcc
ctgacacacactccatttggtcctttgtgtgcctcctctctacacaggac
aggtaggacaaaggtgtgcctgcagccgtgggccacctaaagtcctaaga
gcagagccagagactgctgtgtattcatgtgtattagttactgttactgt
tttgatcaaatgcctgacaagtcccggggagagggattcacgctggctca
cagtttgaggccatacagtctgtctgtccataggccgtacagtctatctg
tccatgggcattgcagtagcagattgaggcagcccatcacacggcgcctg
cagtcaccaagtgggaagaggctggggctggggctttagcttcctctcct
ctctttatccagtcttttatccagaccccagcccatgggatgatgctggg
gtggatctgccttctgaaacaacctcacactcatacccgatgtgcatttc
cacagaggtcaactgtgaaagattgacagtcacagtgtaactacccttca
agtggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_157829302_157829454
seq2: B6Ng01-113F18.b_53_205 (reverse)

seq1  CACCCCCCCACCCCAACACACAATGTCCCAGACAATGTCCCAGACACCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCCCACCCCAACACACAATGTCCCAGACAATGTCCCAGACACCTC  50

seq1  AACTGTCCATATTTCCTTACTGTAATGTGGACCCCAACCTTCTACTTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTCCATATTTCCTTACTGTAATGTGGACCCCAACCTTCTACTTACA  100

seq1  AAGTGCTACACAGGATGTTTTGACATTCCTCCTTCAGATTACCAAAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTACACAGGATGTTTTGACATTCCTCCTTCAGATTACCAAAGACA  150

seq1  TCA  153
      |||
seq2  TCA  153

seq1: chr2_157696605_157697458
seq2: B6Ng01-113F18.g_68_924

seq1  GAATTCTCAGGAGCCCCAAAGGGGCCGGCAGGAGGGGCCCCAGAGGGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGGAGCCCCAAAGGGGCCGGCAGGAGGGGCCCCAGAGGGGCC  50

seq1  CGCACTCCTTCTTTGTTCCAGGGCACATGTTCAAGCTGCTGCATGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACTCCTTCTTTGTTCCAGGGCACATGTTCAAGCTGCTGCATGCTGGC  100

seq1  TGATGCCGTGTTCTCAGCAGCACCTCTGTCTGCTCTGAGCATGTCCTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCCGTGTTCTCAGCAGCACCTCTGTCTGCTCTGAGCATGTCCTGAT  150

seq1  GCTCATCCCCATGTCAGAAGTGGCGGTGTGGCCTTCCTTTGCAGGCAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATCCCCATGTCAGAAGTGGCGGTGTGGCCTTCCTTTGCAGGCAGTG  200

seq1  TGCTCATCCCTCCTCTCCCTGCCTGTGGCTCTCTTTCAGGTTGACAGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCATCCCTCCTCTCCCTGCCTGTGGCTCTCTTTCAGGTTGACAGACT  250

seq1  AATGGAGCTGCATTTTAAATATCTCAGCGCAATGCAGGTGGCCGACAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGCTGCATTTTAAATATCTCAGCGCAATGCAGGTGGCCGACAAGA  300

seq1  AGATTGAAGGGGAGAAACATGTACGTACCCTGCCCACTTCTTGACAGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGAAGGGGAGAAACATGTACGTACCCTGCCCACTTCTTGACAGTCC  350

seq1  CTGACACACACTCCATTTGGTCCTTTGTGTGCCTCCTCTCTACACAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACACACACTCCATTTGGTCCTTTGTGTGCCTCCTCTCTACACAGGAC  400

seq1  AGGTAGGACAAAGGTGTGCCTGCAGCCGTGGGCCACCTAAAGTCCTAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGGACAAAGGTGTGCCTGCAGCCGTGGGCCACCTAAAGTCCTAAGA  450

seq1  GCAGAGCCAGAGACTGCTGTGTATTCATGTGTATTAGTTACTGTTACTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCCAGAGACTGCTGTGTATTCATGTGTATTAGTTACTGTTACTGT  500

seq1  TTTGATCAAATGCCTGACAAGTCCCGGGGAGAGGGATTCACGCTGGCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATCAAATGCCTGACAAGTCCCGGGGAGAGGGATTCACGCTGGCTCA  550

seq1  CAGTTTGAGGCCATACAGTCTGTCTGTCCATAGGCCGTACAGTCTATCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGAGGCCATACAGTCTGTCTGTCCATAGGCCGTACAGTCTATCTG  600

seq1  TCCATGGGCATTGCAGTAGCAGATTGAGGCAGCCCATCACACGGCGCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGGCATTGCAGTAGCAGATTGAGGCAGCCCATCACACGGCGCCTG  650

seq1  CAGTCACCAAGTGGGAAGAGGCTGGGGCTGGGGC-TTAGCTTCCTCTCCT  699
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CAGTCACCAAGTGGGAAGAGGCTGGGGCTGGGGCTTTAGCTTCCTCTCCT  700

seq1  CTCTTTATCCAGTC-TTTATCCAGACCCCAGCCCATGGGATGATGCT-GG  747
      |||||||||||||| |||||||||||||||||||||||||||||||| ||
seq2  CTCTTTATCCAGTCTTTTATCCAGACCCCAGCCCATGGGATGATGCTGGG  750

seq1  GTGGATCTGCCTTCTGAAAACAACCTCACACTCATACCCGATGTGCATTT  797
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTGGATCTGCCTTCTG-AAACAACCTCACACTCATACCCGATGTGCATTT  799

seq1  CCACAGAGGTCAACTGTG-AAGATTGACAGTCACAGTGTAACTACCCTTC  846
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCACAGAGGTCAACTGTGAAAGATTGACAGTCACAGTGTAACTACCCTTC  849

seq1  AAGTGGTT  854
      ||||||||
seq2  AAGTGGTT  857