BAC Information

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BAC

Clone NameB6Ng01-114D14
Chromosome2 (Build37)
Map Location 166,759,731 - 166,862,938
singlet/doubletdoublet
Overlap geneCse1l, Stau1, LOC383774, Ddx27, AI481105
Upstream geneLOC546780, Ncoa3, Sulf2, LOC670775, Ppia-ps2_2197.1, BC067047, Trp53rk, Arfgef2, LOC670802
Downstream gene1500012F01Rik, LOC668950, Kcnb1, Ptgis, LOC668951, B4galt5, Slc9a8, Spata2, Zfp313, Snai1, Ube2v1, AI840826, Cebpb, LOC100043728, Ptpn1, 2310033K02Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114D14.bB6Ng01-114D14.g
ACCDH919796DH919797
length1,1071,092
definitionDH919796|Mus musculus domesticus DNA, BAC clone: B6Ng01-114D14, 5' end.DH919797|Mus musculus domesticus DNA, BAC clone: B6Ng01-114D14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(166,861,805 - 166,862,938)(166,759,731 - 166,760,825)
sequence
gaattcctaatacttcaagagaagctggcccagaaaaacctgtcagtgaa
ggacctgggcctggtggagaattctatccgcttctatgaccacttggcca
acctggaggggtcactggagaaggtgcattgtggagaacagcagagcgtg
aggactcgacttgagcaggtccacgagtggctggccaagaagcgcctgag
cttcagcagccaggaactgagtgacctccagagtgaaatccagaggctca
cctatttggtgaacctcctgatgcgctgcaagatggccgagaaggtgaaa
ggcagcatagcagaagaggtctccagcatccggaacattcttgaaaagac
aagtaagttcacccaggaagatgaacagcttgtgcagaaaaagatggatg
ctctgaaaaccacccttccctgctctggcttgggcatctcagatgaggaa
cgagtgcagattgtcactgccatgggtgttcctcgtgggcattggttcaa
gtgccccaatggccacatctatgtaattactgagtgtgggggcgccatgc
aaaggagtacctgtcccgagtgtcaggaggtgatcggtggggagaatcac
actctagagaggagcaaccacctggcctctgagatggatggagcccagca
ccctgcctggtcgaacacagccaacaacttcatgaactttgaggagatcc
acaggatgatgtagaagatggcacctcaaggccttttgccctgccacctc
agagccagggttggctcctccatggaggaaccagtttattagtgtccttt
agtcttcgcacttgtctaaagatccacttttagggcttgcccacatgtga
ttctatatgtaccctgcgctagagtaagcactttacccccagcactgagc
agagcccacagttctcagctcctcgactgtagcaagtagactgactcctg
ggagcttcggcctccacccggggatattaggtgatgggtcctgcatggca
gcactctgcgcgtgccaggtgcactgctctcatgtcaggcctaacttgca
tactaccatgtatacagcaacccagaaagagcttaaggaccactttactt
aagaacc
gaattcagttttgaaaatccacatagaagagcggtgcctcctgcaaggtg
tgagctctcctccacgtgctcaaacacaatttgaactaccatatgtaaaa
taactttgaattattttaaagtatggttcttaaaattgtagaaagctgtt
tttcaatattttggtgtgcttacttgttttaagattctgccttcatcatg
ccaggagttcagaaaagaatggggggcgacagtggagttaatggctagag
aaggggctcatacctgtctctactccagctccagaggatctgaccgcagg
ccctgaatgcacagagcacacactcatacacatgagtaaatacttcctaa
taaaccgtgcttgggaacacagccgtgcagacctcactctatcaacaata
cagcctgtcacagcacagcaggggggagctgtgggcctggttattaatgt
caacgcagtggttttccatttctttttctaaaaagtaacattggatttag
aagatatggtaatgtttttcaggtaccaaaagagcacctcctagtctcta
ttcccctcttgatcagtcacctggaggctgagagtattgtcgtccacact
tatgccgcacatgctctcgaaaggctgttcactatgagagggtcaaacaa
taccactctgtaagtatttgatttctgagtgtttcctgtactttttagct
taaggcagaggggtataccttactggtgtgagatgtctcaggtgttttcc
taatgtcattagtatttagaaaaacttatatgtgtaatttttattcattt
aacttctcttttccaaaaggatgtaaggcaattcactaaatagagtcatt
ctattaatgaattagagcagagtaaaataacaattgtgagggtgttgaaa
acaaacaaatgtatgtcaggaggcctcatataatgacaagcctgctagct
tattgaagtcttgtcagcagtcaggagagaggaaacatggagacttgagt
atttattgagagtaaagcaaaaggcttcgtcagacacctgtgtggccgca
tgtgtttgcagtgtctccactgctgcttgcgcaatagcctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_166861805_166862938
seq2: B6Ng01-114D14.b_49_1155 (reverse)

seq1  GGTTCTTGTGCTCCTTGAAGGTAAAGTGGTTCCTAAAGCTCTCTCTGGGT  50
      |||||||           | ||||||||| |||| ||||||| |||||||
seq2  GGTTCTT-----------AAGTAAAGTGG-TCCTTAAGCTCTTTCTGGGT  38

seq1  TGCTGTTATTACAATGGTAGTATGCAAGTTAGGGCCTGGACATGAGAAGC  100
      ||||||   ||| |||||||||||||||||| ||||| |||||||| |||
seq2  TGCTGT--ATAC-ATGGTAGTATGCAAGTTA-GGCCT-GACATGAG-AGC  82

seq1  AGTGCACCCTGGGCACGCGCAGAAGTGCTGGCCATGCCAGGACCCAATCA  150
      ||||||||   ||||||||||| |||||| |||||| |||||||| ||||
seq2  AGTGCACC--TGGCACGCGCAG-AGTGCT-GCCATG-CAGGACCC-ATCA  126

seq1  CCCTAATATCCCCGGGTGGAGGCCGGAAGCTCCCAGGAGTCAGTCCTACT  200
       ||||||||||||||||||||||| ||||||||||||||||||| |||||
seq2  -CCTAATATCCCCGGGTGGAGGCC-GAAGCTCCCAGGAGTCAGT-CTACT  173

seq1  TGCTACAGTCGAGGAGCTGAGAACTGTGGGCTCTGCTCAGTGCTGGGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACAGTCGAGGAGCTGAGAACTGTGGGCTCTGCTCAGTGCTGGGGGT  223

seq1  AAAGTGCTTACTCTAGCGCAGGGTACATATAGAATCACATGTGGGCAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCTTACTCTAGCGCAGGGTACATATAGAATCACATGTGGGCAAGC  273

seq1  CCTAAAAGTGGATCCTTAGACAAGTGCGAAGACTAAAGGACACTAATAAA  350
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CCTAAAAGTGGATCTTTAGACAAGTGCGAAGACTAAAGGACACTAATAAA  323

seq1  CTGGTTCCTCCATGGAGGAGCCAACCCTGGCTCTGAGGTGGCAGGGCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTCCTCCATGGAGGAGCCAACCCTGGCTCTGAGGTGGCAGGGCAAA  373

seq1  AGGCCTTGAGGTGCCATCTTCTACATCATCCTGTGGATCTCCTCAAAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTTGAGGTGCCATCTTCTACATCATCCTGTGGATCTCCTCAAAGTT  423

seq1  CATGAAGTTGTTGGCTGTGTTCGACCAGGCAGGGTGCTGGGCTCCATCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGTTGTTGGCTGTGTTCGACCAGGCAGGGTGCTGGGCTCCATCCA  473

seq1  TCTCAGAGGCCAGGTGGTTGCTCCTCTCTAGAGTGTGATTCTCCCCACCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAGGCCAGGTGGTTGCTCCTCTCTAGAGTGTGATTCTCCCCACCG  523

seq1  ATCACCTCCTGACACTCGGGACAGGTACTCCTTTGCATGGCGCCCCCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCTCCTGACACTCGGGACAGGTACTCCTTTGCATGGCGCCCCCACA  573

seq1  CTCAGTAATTACATAGATGTGGCCATTGGGGCACTTGAACCAATGCCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTAATTACATAGATGTGGCCATTGGGGCACTTGAACCAATGCCCAC  623

seq1  GAGGAACACCCATGGCAGTGACAATCTGCACTCGTTCCTCATCTGAGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACACCCATGGCAGTGACAATCTGCACTCGTTCCTCATCTGAGATG  673

seq1  CCCAAGCCAGAGCAGGGAAGGGTGGTTTTCAGAGCATCCATCTTTTTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGCCAGAGCAGGGAAGGGTGGTTTTCAGAGCATCCATCTTTTTCTG  723

seq1  CACAAGCTGTTCATCTTCCTGGGTGAACTTACTTGTCTTTTCAAGAATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCTGTTCATCTTCCTGGGTGAACTTACTTGTCTTTTCAAGAATGT  773

seq1  TCCGGATGCTGGAGACCTCTTCTGCTATGCTGCCTTTCACCTTCTCGGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGATGCTGGAGACCTCTTCTGCTATGCTGCCTTTCACCTTCTCGGCC  823

seq1  ATCTTGCAGCGCATCAGGAGGTTCACCAAATAGGTGAGCCTCTGGATTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGCAGCGCATCAGGAGGTTCACCAAATAGGTGAGCCTCTGGATTTC  873

seq1  ACTCTGGAGGTCACTCAGTTCCTGGCTGCTGAAGCTCAGGCGCTTCTTGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGGAGGTCACTCAGTTCCTGGCTGCTGAAGCTCAGGCGCTTCTTGG  923

seq1  CCAGCCACTCGTGGACCTGCTCAAGTCGAGTCCTCACGCTCTGCTGTTCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCACTCGTGGACCTGCTCAAGTCGAGTCCTCACGCTCTGCTGTTCT  973

seq1  CCACAATGCACCTTCTCCAGTGACCCCTCCAGGTTGGCCAAGTGGTCATA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATGCACCTTCTCCAGTGACCCCTCCAGGTTGGCCAAGTGGTCATA  1023

seq1  GAAGCGGATAGAATTCTCCACCAGGCCCAGGTCCTTCACTGACAGGTTTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCGGATAGAATTCTCCACCAGGCCCAGGTCCTTCACTGACAGGTTTT  1073

seq1  TCTGGGCCAGCTTCTCTTGAAGTATTAGGAATTC  1134
      ||||||||||||||||||||||||||||||||||
seq2  TCTGGGCCAGCTTCTCTTGAAGTATTAGGAATTC  1107

seq1: chr2_166759731_166760825
seq2: B6Ng01-114D14.g_68_1159

seq1  GAATTCAGTTTTGAAAATCCACATAGAAGAGCGGTGCCTCCTGCAAGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTTGAAAATCCACATAGAAGAGCGGTGCCTCCTGCAAGGTG  50

seq1  TGAGCTCTCCTCCACGTGCTCAAACACAATTTGAACTACCATATGTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCTCCTCCACGTGCTCAAACACAATTTGAACTACCATATGTAAAA  100

seq1  TAACTTTGAATTATTTTAAAGTATGGTTCTTAAAATTGTAGAAAGCTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTGAATTATTTTAAAGTATGGTTCTTAAAATTGTAGAAAGCTGTT  150

seq1  TTTCAATATTTTGGTGTGCTTACTTGTTTTAAGATTCTGCCTTCATCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATATTTTGGTGTGCTTACTTGTTTTAAGATTCTGCCTTCATCATG  200

seq1  CCAGGAGTTCAGAAAAGAATGGGGGGCGACAGTGGAGTTAATGGCTAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGTTCAGAAAAGAATGGGGGGCGACAGTGGAGTTAATGGCTAGAG  250

seq1  AAGGGGCTCATACCTGTCTCTACTCCAGCTCCAGAGGATCTGACCGCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGCTCATACCTGTCTCTACTCCAGCTCCAGAGGATCTGACCGCAGG  300

seq1  CCCTGAATGCACAGAGCACACACTCATACACATGAGTAAATACTTCCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAATGCACAGAGCACACACTCATACACATGAGTAAATACTTCCTAA  350

seq1  TAAACCGTGCTTGGGAACACAGCCGTGCAGACCTCACTCTATCAACAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCGTGCTTGGGAACACAGCCGTGCAGACCTCACTCTATCAACAATA  400

seq1  CAGCCTGTCACAGCACAGCAGGGGGGAGCTGTGGGCCTGGTTATTAATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGTCACAGCACAGCAGGGGGGAGCTGTGGGCCTGGTTATTAATGT  450

seq1  CAACGCAGTGGTTTTCCATTTCTTTTTCTAAAAAGTAACATTGGATTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGCAGTGGTTTTCCATTTCTTTTTCTAAAAAGTAACATTGGATTTAG  500

seq1  AAGATATGGTAATGTTTTTCAGGTACCAAAAGAGCACCTCCTAGTCTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATGGTAATGTTTTTCAGGTACCAAAAGAGCACCTCCTAGTCTCTA  550

seq1  TTCCCCTCTTGATCAGTCACCTGGAGGCTGAGAGTATTGTCGTCCACACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTCTTGATCAGTCACCTGGAGGCTGAGAGTATTGTCGTCCACACT  600

seq1  TATGCCGCACATGCTCTCGAAAGGCTGTTCACTATGAGAGGGTCAAACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCGCACATGCTCTCGAAAGGCTGTTCACTATGAGAGGGTCAAACAA  650

seq1  TACCACTCTGTAAGTATTTGATTTCTGAGTGTTTCCTGTACTTTTTAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACTCTGTAAGTATTTGATTTCTGAGTGTTTCCTGTACTTTTTAGCT  700

seq1  TAAGGCAGAGGGGTATACCTTACTGGTGTGAGATGTCTCAGGGTGTTTTC  750
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TAAGGCAGAGGGGTATACCTTACTGGTGTGAGATGTCTCA-GGTGTTTTC  749

seq1  CTAATGTCATTAGTATTTAGAAAAACTTATATGTGTAATTTTTATTCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTCATTAGTATTTAGAAAAACTTATATGTGTAATTTTTATTCATT  799

seq1  TAACTTCTC-TTTCCAAAAGGATGTAAGGCAATTCACTAAATAGAGTCAT  849
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCTCTTTTCCAAAAGGATGTAAGGCAATTCACTAAATAGAGTCAT  849

seq1  TCTATTAATGAATTAGAGCAGAGTAAAATAACAATTGTGAGGTTGTTGAA  899
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCTATTAATGAATTAGAGCAGAGTAAAATAACAATTGTGAGGGTGTTGAA  899

seq1  AACAAACAAATGTATGTCAGGAGGCCTCATATAATGACAAGCCTGCTAGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAATGTATGTCAGGAGGCCTCATATAATGACAAGCCTGCTAGC  949

seq1  TTTATTTGAAGTCTTGTCAGCAGTCAGGAGAGAGGGAAACATGGAGACTT  999
      ||   |||||||||||||||||||||||||||| ||||||||||||||||
seq2  TT--ATTGAAGTCTTGTCAGCAGTCAGGAGAGA-GGAAACATGGAGACTT  996

seq1  GAGTATTTATTGAGAGTAAAGCAAAGGGCTTCGTCAGACA-CTGTGTGGC  1048
      ||||||||||||||||||||||||| |||||||||||||| |||||||||
seq2  GAGTATTTATTGAGAGTAAAGCAAAAGGCTTCGTCAGACACCTGTGTGGC  1046

seq1  CGCATGTGTCTGCAGTGTCTCCCAACTGCTGC-TGCGC-ATAGCTCTCT  1095
      ||||||||| ||||||||||||  |||||||| ||||| ||||| ||||
seq2  CGCATGTGTTTGCAGTGTCTCC--ACTGCTGCTTGCGCAATAGC-CTCT  1092