BAC Information

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BAC

Clone NameB6Ng01-114P08
Chromosome2 (Build37)
Map Location 171,515,450 - 171,516,614
singlet/doubletsinglet
Overlap genenone
Upstream geneDok5, LOC668955, LOC100043743
Downstream geneLOC100043744, Cbln4, Mc3r, 2010011I20Rik, Aurka, Cstf1, F730031O20Rik, 2410001C21Rik, A330041C17Rik, 1700029J11Rik, LOC629957, Tcfap2c, LOC100043750
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114P08.bB6Ng01-114P08.g
ACCDH920346DH920347
length9111,154
definitionDH920346|Mus musculus domesticus DNA, BAC clone: B6Ng01-114P08, 5' end.DH920347|Mus musculus domesticus DNA, BAC clone: B6Ng01-114P08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacatatccaccgtgaaacatgagcagcagataagaaactagaga
aaaatagcatatctcctccttcatgggccctgttacttttgctatgttct
gtttgttcttatcacatatattagctttggtcccctttgtaaattctaga
ctttatctactctgataactatttatatataccttacacacacatggcta
tgaacctatgttttgacagaggaggcaaaaacatggagtgggtaaaagac
cttgtattcaacaaatggtgcaggcaaactggatactcccctacagttga
atgaaattagaactgtatctttgactttgtacaaagatcagctcaaagtg
ggccaaagaaattgaaaccttaaacagttagaggaagatactggggatga
atgctctttaagatatcaagatgggcaaggctccctgaatagaacttcta
atgaccacagggtccagccactagagtcagaatgggagcaagtgaaatga
aaatgtttctgtccaacaaaagaaactatcagcagagataacatagccta
caaaagtttgacaaaatctttaccatctacatttcagacaagaggctaat
atccagcattacaaagaactgcaaaaattaaatccaaggaagtagaactg
ccaatgaacaatgggctagtggcatgaatagacagtttgtgaaagaaacc
aaaatggcctgtaactattttaaaaagggtctgcctcacacagggactgg
agagatggcttagtggttacgagagcttactgctcttctgaggacctgag
ttcaatcccttagatcccatttaaggcaatccacaactcctgtggcttca
attagagatctcactccttttctactttctgtatgtatgtatgtgtgtat
gtatgtatgta
gaattctctctctgtagaagacagccactcacagaggcagttgctaggag
agtgagggctacttctatatggaggggaagaaaacaaaacactatcacat
taaattactggactgtagtcaccccttccccctactaggaaagccatcaa
acttcgctgctgctttaaacagtatatgtgcctgcttatgttccttggaa
aacttcttttacatgatgatagataattacatttttacctcctcttctaa
caataaggaggtcactatattcagacacttctccatccttgattaaaaat
attatccaggggagataatgaggaaaatcaacggattactgtgtcgtgga
tggaaaactcttaaggtagcagagtgaggaatgtcgtcttccaaagtaga
cgtggcatttggagtctttagtacagggattctcaaccttccttaagctg
tgaccctttaatgctgttcctcctgttgtagtgaccccagccataaaatt
atttccattgctaattcctaactgtcattctgctacggttacaaattata
atgtaactatctgatgatacctgaggggtcgaatcccacaggttgagagc
cactgccacagtagatactttgctgttacaagctgttaccctgctggggg
tcgggggaggacaagctaggaatgatagagccctacggtcccatcagtga
gctaacccccagcagttgaaagttggttacatattcccaaatgttttcac
caaactcaagagaagaggggcattgattctccccagagttggagactgaa
aatacacctgggtttcagaagtagccaaggtattacagggcatgcattgc
cccatcacctcatagacaaagaaccaggtgaggggagaagtgagcaatct
ctctgtcagtttcaaacaacagtccagactccttccatccctgaggagtc
taccagtgctcggtggaagccagcttgaaatttgagacacttctggctaa
ggagtggcaggccacggaatccattgagcttctctcagaaggttttctga
gtggcaatgagagtggaggaactttgagccagttggagaacatgcttaat
attcgtgtttcatgcagcagcatcccacttggatggggcgtttttcatgg
ccgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_171515450_171516614
seq2: B6Ng01-114P08.g_65_1218

seq1  GAATTCTCTCTCTGTAGAAGACAGCCACTCACAGAGGCAGTTGCTAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCTGTAGAAGACAGCCACTCACAGAGGCAGTTGCTAGGAG  50

seq1  AGTGAGGGCTACTTCTATATGGAGGGGAAGAAAACAAAACACTATCACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGGGCTACTTCTATATGGAGGGGAAGAAAACAAAACACTATCACAT  100

seq1  TAAATTACTGGACTGTAGTCACCCCTTCCCCCTACTAGGAAAGCCATCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTACTGGACTGTAGTCACCCCTTCCCCCTACTAGGAAAGCCATCAA  150

seq1  ACTTCGCTGCTGCTTTAAACAGTATATGTGCCTGCTTATGTTCCTTGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCGCTGCTGCTTTAAACAGTATATGTGCCTGCTTATGTTCCTTGGAA  200

seq1  AACTTCTTTTACATGATGATAGATAATTACATTTTTACCTCCTCTTCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTTTTACATGATGATAGATAATTACATTTTTACCTCCTCTTCTAA  250

seq1  CAATAAGGAGGTCACTATATTCAGACACTTCTCCATCCTTGATTAAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAGGAGGTCACTATATTCAGACACTTCTCCATCCTTGATTAAAAAT  300

seq1  ATTATCCAGGGGAGATAATGAGGAAAATCAACGGATTACTGTGTCGTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCCAGGGGAGATAATGAGGAAAATCAACGGATTACTGTGTCGTGGA  350

seq1  TGGAAAACTCTTAAGGTAGCAGAGTGAGGAATGTCGTCTTCCAAAGTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAACTCTTAAGGTAGCAGAGTGAGGAATGTCGTCTTCCAAAGTAGA  400

seq1  CGTGGCATTTGGAGTCTTTAGTACAGGGATTCTCAACCTTCCTTAAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGCATTTGGAGTCTTTAGTACAGGGATTCTCAACCTTCCTTAAGCTG  450

seq1  TGACCCTTTAATGCTGTTCCTCCTGTTGTAGTGACCCCAGCCATAAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCTTTAATGCTGTTCCTCCTGTTGTAGTGACCCCAGCCATAAAATT  500

seq1  ATTTCCATTGCTAATTCCTAACTGTCATTCTGCTACGGTTACAAATTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCATTGCTAATTCCTAACTGTCATTCTGCTACGGTTACAAATTATA  550

seq1  ATGTAACTATCTGATGATACCTGAGGGGTCGAATCCCACAGGTTGAGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAACTATCTGATGATACCTGAGGGGTCGAATCCCACAGGTTGAGAGC  600

seq1  CACTGCCACAGTAGATACTTTGCTGTTACAAGCTGTTACCCTGCTGGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCACAGTAGATACTTTGCTGTTACAAGCTGTTACCCTGCTGGGGG  650

seq1  TCGGGGGAGGACAAGCTAGGAATGATAGAGCCCTACGGTCCCATCAGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGGGAGGACAAGCTAGGAATGATAGAGCCCTACGGTCCCATCAGTGA  700

seq1  GCTAACCCCCAGCAGTTGAAAGTTGGTTACATATTCCCAAATGTTTTCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACCCCCAGCAGTTGAAAGTTGGTTACATATTCCCAAATGTTTTCAC  750

seq1  CAAACTCAAGAGAAGAGGGGCATTGATTCTCCCCAGAGTTGGAGACTGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCAAGAGAAGAGGGGCATTGATTCTCCCCAGAGTTGGAGACTGAA  800

seq1  AATACACCTGGGTTTCAGAAGTAGCCAAGGTATTACAGGGCATGCATTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACCTGGGTTTCAGAAGTAGCCAAGGTATTACAGGGCATGCATTGC  850

seq1  CCCATCACCTCATAGACAAAGAACCAGGTGAGGGGAGAAGTGAGCAATCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCACCTCATAGACAAAGAACCAGGTGAGGGGAGAAGTGAGCAATCT  900

seq1  CTCTGTCAG-TTCAAACAACAGTCCAGACTCCTTCCATCCCTGAGGAGTC  949
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCAGTTTCAAACAACAGTCCAGACTCCTTCCATCCCTGAGGAGTC  950

seq1  TACCAGTGCTCGGTGGAAGCCAGCTTGAAATTTGAGACCACTTCTGGCCT  999
      ||||||||||||||||||||||||||||||||||||| ||||||||| ||
seq2  TACCAGTGCTCGGTGGAAGCCAGCTTGAAATTTGAGA-CACTTCTGG-CT  998

seq1  AAGGGAGTGGCAGGCCACGGAATCCATTGAGCTTCTCTCAG-AGGTTTTC  1048
      || |||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AA-GGAGTGGCAGGCCACGGAATCCATTGAGCTTCTCTCAGAAGGTTTTC  1047

seq1  TGAAGTGGCAATAGAGAGTGGAGGACACTTTGAGGCAGTTGGAGACAATG  1098
      || ||||||||| |||||||||||| |||||||| ||||||||||  |||
seq2  TG-AGTGGCAAT-GAGAGTGGAGGA-ACTTTGAGCCAGTTGGAGAACATG  1094

seq1  C-TAATATTTGTTGTTTCAATGGCAGCAGCAATCCCACTTTGATGGGGCC  1147
      | ||||||| | |||||||   |||||||| ||||||||| ||||||| |
seq2  CTTAATATTCG-TGTTTCA--TGCAGCAGC-ATCCCACTTGGATGGGG-C  1139

seq1  GTTTGTTTCCATGGCCGC  1165
      ||   ||| |||||||||
seq2  GT---TTTTCATGGCCGC  1154