BAC Information

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BAC

Clone NameB6Ng01-115O08
Chromosome2 (Build37)
Map Location 48,655,490 - 48,656,325
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383691, LOC100041457
Downstream geneLOC383692, Acvr2a, Orc4l, LOC100041508, Mbd5, LOC100042719, LOC666709, LOC435666, Epc2, Kif5c, 2310010M24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115O08.bB6Ng01-115O08.g
ACCDH921039DH921040
length8381,222
definitionDH921039|Mus musculus domesticus DNA, BAC clone: B6Ng01-115O08, 5' end.DH921040|Mus musculus domesticus DNA, BAC clone: B6Ng01-115O08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaggtctctggagtgggcttgtagtgcagtcacctcctggagc
agaggtgggtaaagcaaaaagaaagccatgtgggagccagagcatggatg
attccaaaggcagtagtttcaaaactgcatgcagcatttcttcagtggta
taaccactaataagttacctgcagataaccctatatccatgatcctgtaa
aaaccctcattatatgaactgggtcaccaaaaaaagaaaaacagaaaaaa
agtaagacggtccaattgaagagagaaaaggaattaacaggtgttagaat
ggagacaagagaagggaatagaggatgaacctgatcaaaacacataattt
acatgtataaaatataatgatatgccttattgtatataatactacatgat
agtgatcttaaatttaaaagaagaggtgacgggcataattgtttagaggg
ttgacactgttctgatgtcccattaatttcttggcagataccaagcaaat
aaactagaaaaaacagagtatgaaagaatagaagtaaaagtgtttttaag
cgtgtctaatgataatgaagctggactaccactgtagtcattgacaagag
tgcccactggtaatgagacccatggctacctctttgtgtgcattcttatt
tgaattctttgagtacttttaaagaaacttgcaaaatactataattttat
agaagagggacaatcttgactgccaaaaacatctaagagtaataaagtta
taaatagacacatcctaatttattgccctccttttcaaagatttctatta
cttttaaattagtgtgtgtgtgtgtggtggtgtgtgtg
gaattccccttaaagatatagcccctctggccatctatcccttgctttag
ggaagatgagcgggggtgagagccctgggatgtatgcttgttatagtgtg
tgtgtgtgtgtgttgtgtgtttggcacatgtgttaggtgcagcgtgtgca
ggcccgcactttcgccatggtagcataggcttttgctgcagtggaggcgg
gacaatctcctcagattcggtttgccgctctaaaagaaattatgctgcgt
tatgccgtggggtgcgaggctaagcactgcacagaggatagcttgctgtt
ggcatcctgtggaaggcatgtctgattgcatgaaggttcagtgtcctagt
tcccttcccccaggaaaaacgacacgggagctggccaagacctctctggg
tgatgagcctaagggatggttttgtgtagggcccctatgcttgcacactg
gggatcagacctctaccttcacccatgaggcttgcttgcagcaattaaga
tctggccataggttaattaacatcctggccttttgatgcacctgccgcaa
gcaaaacacaatctccccaggtgtggcttggcataatagagaggtagtca
gtgataagactccctgggcatgtcaccaacctaagacagggatcaaacca
atgctgtttgtcacccaaggacgggtaaggggcatggctgcggggggcta
tctacagacattctctctgccaaaaaagaaaaaagggggaattgtgggga
gcgggtgtggcggcagtcctaaaggtgccagggactgcagctaagtcata
tgacttgcacctgacttcctcatataagacacaaacatcttgagtgctgc
gcagtgcaccaggatacaggtgaatccagttttgatggagatatgcccct
gctgccctgattagctgaagctgcatgcctggtgaggtggcgtggcctgc
tgtgcgtggatgggaactgaaagtataaagagtgagaggcccagggttcg
gggagatataaaaccacggagaatataacagggaagatttaaaactacgg
aaaaataaaaacaagggagttttaaaacaggaagatataacgaggggaat
ttacgaggaattggaaaggaagaaccgactgataacgtgtcgaatattct
gtacacgtcgtttctctggccaagttgacgcggcacaacggtactactgc
tgagggagagaccctttcacga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_48655490_48656325
seq2: B6Ng01-115O08.b_49_886 (reverse)

seq1  CACACACAC--ACACACACACACACACTAATTTAAAAGTAATAGAAATCT  48
      |||||||||   ||||||||||||||||||||||||||||||||||||||
seq2  CACACACACCACCACACACACACACACTAATTTAAAAGTAATAGAAATCT  50

seq1  TTGAAAAGGAGGGCAATAAATTAGGATGTGTCTATTTATAACTTTATTAC  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAGGAGGGCAATAAATTAGGATGTGTCTATTTATAACTTTATTAC  100

seq1  TCTTAGATGTTTTTGGCAGTCAAGATTGTCCCTCTTCTATAAAATTATAG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGATGTTTTTGGCAGTCAAGATTGTCCCTCTTCTATAAAATTATAG  150

seq1  TATTTTGCAAGTTTCTTTAAAAGTACTCAAAGAATTCAAATAAGAATGCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGCAAGTTTCTTTAAAAGTACTCAAAGAATTCAAATAAGAATGCA  200

seq1  CACAAAGAGGTAGCCATGGGTCTCATTACCAGTGGGCACTCTTGTCAATG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGAGGTAGCCATGGGTCTCATTACCAGTGGGCACTCTTGTCAATG  250

seq1  ACTACAGTGGTAGTCCAGCTTCATTATCATTAGACACGCTTAAAAACACT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAGTGGTAGTCCAGCTTCATTATCATTAGACACGCTTAAAAACACT  300

seq1  TTTACTTCTATTCTTTCATACTCTGTTTTTTCTAGTTTATTTGCTTGGTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTCTATTCTTTCATACTCTGTTTTTTCTAGTTTATTTGCTTGGTA  350

seq1  TCTGCCAAGAAATTAATGGGACATCAGAACAGTGTCAACCCTCTAAACAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCAAGAAATTAATGGGACATCAGAACAGTGTCAACCCTCTAAACAA  400

seq1  TTATGCCCGTCACCTCTTCTTTTAAATTTAAGATCACTATCATGTAGTAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCCCGTCACCTCTTCTTTTAAATTTAAGATCACTATCATGTAGTAT  450

seq1  TATATACAATAAGGCATATCATTATATTTTATACATGTAAATTATGTGTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACAATAAGGCATATCATTATATTTTATACATGTAAATTATGTGTT  500

seq1  TTGATCAGGTTCATCCTCTATTCCCTTCTCTTGTCTCCATTCTAACACCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCAGGTTCATCCTCTATTCCCTTCTCTTGTCTCCATTCTAACACCT  550

seq1  GTTAATTCCTTTTCTCTCTTCAATTGGACCGTCTTACTTTTTTTCTGTTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTCCTTTTCTCTCTTCAATTGGACCGTCTTACTTTTTTTCTGTTT  600

seq1  TTCTTTTTTTGGTGACCCAGTTCATATAATGAGGGTTTTTACAGGATCAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTGGTGACCCAGTTCATATAATGAGGGTTTTTACAGGATCAT  650

seq1  GGATATAGGGTTATCTGCAGGTAACTTATTAGTGGTTATACCACTGAAGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATAGGGTTATCTGCAGGTAACTTATTAGTGGTTATACCACTGAAGA  700

seq1  AATGCTGCATGCAGTTTTGAAACTACTGCCTTTGGAATCATCCATGCTCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGCATGCAGTTTTGAAACTACTGCCTTTGGAATCATCCATGCTCT  750

seq1  GGCTCCCACATGGCTTTCTTTTTGCTTTACCCACCTCTGCTCCAGGAGGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCCACATGGCTTTCTTTTTGCTTTACCCACCTCTGCTCCAGGAGGT  800

seq1  GACTGCACTACAAGCCCACTCCAGAGACCTTTGAATTC  836
      ||||||||||||||||||||||||||||||||||||||
seq2  GACTGCACTACAAGCCCACTCCAGAGACCTTTGAATTC  838