BAC Information

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BAC

Clone NameB6Ng01-115P18
Chromosome2 (Build37)
Map Location 95,723,067 - 95,879,278
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042843
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115P18.bB6Ng01-115P18.g
ACCDH921101DH921102
length1,0971,081
definitionDH921101|Mus musculus domesticus DNA, BAC clone: B6Ng01-115P18, 5' end.DH921102|Mus musculus domesticus DNA, BAC clone: B6Ng01-115P18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,723,067 - 95,724,166)(95,878,193 - 95,879,278)
sequence
gaattcattcagtgatcttgtttttggtcatgtgcatctctcagaattgc
agttatattttgggagtaaggaaaagactaattttaaggagtataaatga
aagcctttaaagtgttctctctcttacttgccttcttttctgtggagtca
atatcatactgtatgtctaggaagatttattcaagttttatcctcttgaa
ttaccttataaatttttctctttcaagagctaatgtgagcaataaagaat
acaatcccatgaaaagacataatccttgtcagctgtgtcactatgcttca
ctacattcacacaaatataaaatacaaaacaaagtcacaaaggaacaaac
aaaaagttcttagtagtgtctgtgacgtagttatagccctcctagccctc
actctgttccttccaaccctacactctctcaaccgcctcatggagaaagc
agatacttttgtatctgcagatttcatctcaacagagggatgggtattct
ctgcaaagcaaagttttcctcagaaatcaatactgtcattaactgatttt
tgttctcatttcataacaacatttcatctacaagttgaagaacagagtca
ggcatggttatttgtaagtactctttcttgataaattctctttatcagtc
agaagaattgatgactttgtgggtgaaaaggaaaattatatatcagtttc
tttattttattttctatagatcacttaatgaaataaatagttatttatac
cttattctgataaacaatgttctttataataagcagaatgtttatctgtt
tatgtaatatcatttggacaactatttttttttttatttattggcacatg
aaacatggcagtagggatctagggacatttaggaagagaagttcaggatt
gacccaaattaaacataataccctcatcatgtaagtcactgggtttcaac
agattaaaactttgtagtggttggtatgctttaaatgaaaatttcaatat
ttgacaaagtcaatatcacttacattagaaaaggatgctactgccttttt
tctagtacagaaaagagaggtgatggatttgaaagaaaagagaaata
gaattcagttaactttgctaaccagttgtctgggcattgcttgtcattgg
cttgaaatatagaatctcaaagtatctataaaaaaatgacatttacctca
gatcccatgtgatttacattcataggtacataggtcacactgttatgggg
agtgtaaagtgtaaggaaattcacagaactctaaaactgacattaaccat
agacattattagacataattgccacatgtgcagggcttcatttgctggga
cctcagctaacaaagaaaaaaacagcgtcacctaaatccctgacttcaac
tcccttttgtttctgttgtctttttagcatcatttttgctgctttgaatc
tctttgaagagagcaagaggaaacctgactgcctgcttagaattcagatt
agaaaatattcaaatataaatcaccccagactattttaatttaatagaaa
caggttcatttactcaattttaacttctgcctcaggtacatgaaaatctt
gctcaaaacatcttcctgatccgttttttatattagtcgatgaagagaat
cagagtatggtttaaaaagcatggactgatcacttctttgaagaattcat
aattctggattcttgttcaccatcatgcatcttctttcattatgttcaga
ctcttttccacatcagacaagatcttgttctgtctgtgagtgctggagaa
agatggtcttctctgagtgagttttcagtgttctttgtaatcagcgaaag
tgaaacagctctctcttattcagggtcaatgaggcatatatagaaacctt
ggggagtggttagagggttttgatgagatcatacattattagctatggtg
ggggtgctagaaaaacttcatttacataagttgcaatttcagtgcttaaa
tctgtaatttgaccatgtggatatatgactgactactcagaagaacaagt
tgagtcaatgcactgcaacaatccttgaaataatcagaaagctaacagtt
tgctttggggaaagttgattgtattttgagttgaagtgtggttggcttat
gtaaagaaaatgtcaatatttctattgaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_95723067_95724166
seq2: B6Ng01-115P18.b_50_1146

seq1  GAATTCATTCAGTGATCTTGTTTTTGGTCATGTGCATCTCTCAGAATTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCAGTGATCTTGTTTTTGGTCATGTGCATCTCTCAGAATTGC  50

seq1  AGTTATATTTTGGGAGTAAGGAAAAGACTAATTTTAAGGAGTATAAATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATATTTTGGGAGTAAGGAAAAGACTAATTTTAAGGAGTATAAATGA  100

seq1  AAGCCTTTAAAGTGTTCTCTCTCTTACTTGCCTTCTTTTCTGTGGAGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTTAAAGTGTTCTCTCTCTTACTTGCCTTCTTTTCTGTGGAGTCA  150

seq1  ATATCATACTGTATGTCTAGGAAGATTTATTCAAGTTTTATCCTCTTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATACTGTATGTCTAGGAAGATTTATTCAAGTTTTATCCTCTTGAA  200

seq1  TTACCTTATAAATTTTTCTCTTTCAAGAGCTAATGTGAGCAATAAAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTATAAATTTTTCTCTTTCAAGAGCTAATGTGAGCAATAAAGAAT  250

seq1  ACAATCCCATGAAAAGACATAATCCTTGTCAGCTGTGTCACTATGCTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCCCATGAAAAGACATAATCCTTGTCAGCTGTGTCACTATGCTTCA  300

seq1  CTACATTCACACAAATATAAAATACAAAACAAAGTCACAAAGGAACAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTCACACAAATATAAAATACAAAACAAAGTCACAAAGGAACAAAC  350

seq1  AAAAAGTTCTTAGTAGTGTCTGTGACGTAGTTATAGCCCTCCTAGCCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTTCTTAGTAGTGTCTGTGACGTAGTTATAGCCCTCCTAGCCCTC  400

seq1  ACTCTGTTCCTTCCAACCCTACACTCTCTCAACCGCCTCATGGAGAAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTTCCTTCCAACCCTACACTCTCTCAACCGCCTCATGGAGAAAGC  450

seq1  AGATACTTTTGTATCTGCAGATTTCATCTCAACAGAGGGATGGGTATTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACTTTTGTATCTGCAGATTTCATCTCAACAGAGGGATGGGTATTCT  500

seq1  CTGCAAAGCAAAGTTTTCCTCAGAAATCAATACTGTCATTAACTGATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAAGCAAAGTTTTCCTCAGAAATCAATACTGTCATTAACTGATTTT  550

seq1  TGTTCTCATTTCATAACAACATTTCATCTACAAGTTGAAGAACAGAGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCATTTCATAACAACATTTCATCTACAAGTTGAAGAACAGAGTCA  600

seq1  GGCATGGTTATTTGTAAGTACTCTTTCTTGATAAATTCTCTTTATCAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGTTATTTGTAAGTACTCTTTCTTGATAAATTCTCTTTATCAGTC  650

seq1  AGAAGAATTGATGACTTTGTGGGTGAAAAGGAAAATTATATATCAGTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAATTGATGACTTTGTGGGTGAAAAGGAAAATTATATATCAGTTTC  700

seq1  TTTATTTTATTTTCTATAGATCACTTAATGAAATAAATAGTTATTTATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTATTTTCTATAGATCACTTAATGAAATAAATAGTTATTTATAC  750

seq1  CTTATTCTGATAAACAATGTTCTTTATAATAAGCAGAATGTTTATCTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTCTGATAAACAATGTTCTTTATAATAAGCAGAATGTTTATCTGTT  800

seq1  TATGTAATATCATTTGGACAACTA-TTTTTTTTTTATTTATTGGCACATG  849
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TATGTAATATCATTTGGACAACTATTTTTTTTTTTATTTATTGGCACATG  850

seq1  AAACATGGCAGTA-GGATCTA-GGACATTTAGGAAGAGAAGTTCAGGATT  897
      ||||||||||||| ||||||| ||||||||||||||||||||||||||||
seq2  AAACATGGCAGTAGGGATCTAGGGACATTTAGGAAGAGAAGTTCAGGATT  900

seq1  GACCCAAAATTAACATAATA-CCTCATCATGTAAGTCACTGGGTTTCAAC  946
      |||||||| | ||||||||| |||||||||||||||||||||||||||||
seq2  GACCCAAATTAAACATAATACCCTCATCATGTAAGTCACTGGGTTTCAAC  950

seq1  AGATTAAAACTTTGTAGTGGTTGGTATGCTTTAAATGAAAAATTTCAAAT  996
      ||||||||||||||||||||||||||||||||||||| |||||||| |||
seq2  AGATTAAAACTTTGTAGTGGTTGGTATGCTTTAAATG-AAAATTTC-AAT  998

seq1  ATTTGACAAAGTCAAATATCACTTACATTAAGAAAAAGGAATGCTACTGC  1046
      ||||||||||||| ||||||||||||||| ||||||  | ||||||||||
seq2  ATTTGACAAAGTC-AATATCACTTACATT-AGAAAA--GGATGCTACTGC  1044

seq1  C-TATTTCTAGTACAGAAAAAGAGAAGGTGATGGATTTGAAAGAAAAGAG  1095
      | | |||||||||||| ||||||| |||||||||||||||||||||||||
seq2  CTTTTTTCTAGTACAG-AAAAGAG-AGGTGATGGATTTGAAAGAAAAGAG  1092

seq1  AAATA  1100
      |||||
seq2  AAATA  1097

seq1: chr2_95878193_95879278
seq2: B6Ng01-115P18.g_69_1149 (reverse)

seq1  ATTTCAATAG-AATATTGACA-TTTCTTTACAT-AGCCAA-CACACTTC-  45
      | |||||||| |||||||||| ||||||||||| |||||| |||||||| 
seq2  AATTCAATAGAAATATTGACATTTTCTTTACATAAGCCAACCACACTTCA  50

seq1  ACTCAAAATACCAATCCTACTTTTCCCCAAAGCAAACCTGTTAGCCTTTC  95
      |||||||||| |||||  |  ||||||||||||||| ||||||| |||||
seq2  ACTCAAAATA-CAATC--AACTTTCCCCAAAGCAAA-CTGTTAG-CTTTC  95

seq1  TGATTATTTTCAAGGATTGTTGCAGTGCATTGGACTCAACTTTGTTCTTC  145
      |||||| |||||||||||||||||||||||| |||||||| |||||||||
seq2  TGATTA-TTTCAAGGATTGTTGCAGTGCATT-GACTCAAC-TTGTTCTTC  142

seq1  TTGAGTAGTCAGTCATATATCCACATGGTCAAATTACAGATTTAAGCACC  195
       ||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  -TGAGTAGTCAGTCATATATCCACATGGTCAAATTACAGATTTAAGCA-C  190

seq1  TGAAATTGCAACTTATGTAAATGAAGTTTTTCTAGCACCCCCACCATAGC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTGCAACTTATGTAAATGAAGTTTTTCTAGCACCCCCACCATAGC  240

seq1  TAATAATGTATGATCTCATCAAAACCCTCTAACCACTCCCCAAGGTTTCT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATGTATGATCTCATCAAAACCCTCTAACCACTCCCCAAGGTTTCT  290

seq1  ATATATGCCTCATTGACCCTGAATAAGAGAGAGCTGTTTCACTTTCGCTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGCCTCATTGACCCTGAATAAGAGAGAGCTGTTTCACTTTCGCTG  340

seq1  ATTACAAAGAACACTGAAAACTCACTCAGAGAAGACCATCTTTCTCCAGC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAAGAACACTGAAAACTCACTCAGAGAAGACCATCTTTCTCCAGC  390

seq1  ACTCACAGACAGAACAAGATCTTGTCTGATGTGGAAAAGAGTCTGAACAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAGACAGAACAAGATCTTGTCTGATGTGGAAAAGAGTCTGAACAT  440

seq1  AATGAAAGAAGATGCATGATGGTGAACAAGAATCCAGAATTATGAATTCT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAGAAGATGCATGATGGTGAACAAGAATCCAGAATTATGAATTCT  490

seq1  TCAAAGAAGTGATCAGTCCATGCTTTTTAAACCATACTCTGATTCTCTTC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAAGTGATCAGTCCATGCTTTTTAAACCATACTCTGATTCTCTTC  540

seq1  ATCGACTAATATAAAAAACGGATCAGGAAGATGTTTTGAGCAAGATTTTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGACTAATATAAAAAACGGATCAGGAAGATGTTTTGAGCAAGATTTTC  590

seq1  ATGTACCTGAGGCAGAAGTTAAAATTGAGTAAATGAACCTGTTTCTATTA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACCTGAGGCAGAAGTTAAAATTGAGTAAATGAACCTGTTTCTATTA  640

seq1  AATTAAAATAGTCTGGGGTGATTTATATTTGAATATTTTCTAATCTGAAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAATAGTCTGGGGTGATTTATATTTGAATATTTTCTAATCTGAAT  690

seq1  TCTAAGCAGGCAGTCAGGTTTCCTCTTGCTCTCTTCAAAGAGATTCAAAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGCAGGCAGTCAGGTTTCCTCTTGCTCTCTTCAAAGAGATTCAAAG  740

seq1  CAGCAAAAATGATGCTAAAAAGACAACAGAAACAAAAGGGAGTTGAAGTC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAAAATGATGCTAAAAAGACAACAGAAACAAAAGGGAGTTGAAGTC  790

seq1  AGGGATTTAGGTGACGCTGTTTTTTTCTTTGTTAGCTGAGGTCCCAGCAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTTAGGTGACGCTGTTTTTTTCTTTGTTAGCTGAGGTCCCAGCAA  840

seq1  ATGAAGCCCTGCACATGTGGCAATTATGTCTAATAATGTCTATGGTTAAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCCCTGCACATGTGGCAATTATGTCTAATAATGTCTATGGTTAAT  890

seq1  GTCAGTTTTAGAGTTCTGTGAATTTCCTTACACTTTACACTCCCCATAAC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTTTTAGAGTTCTGTGAATTTCCTTACACTTTACACTCCCCATAAC  940

seq1  AGTGTGACCTATGTACCTATGAATGTAAATCACATGGGATCTGAGGTAAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGACCTATGTACCTATGAATGTAAATCACATGGGATCTGAGGTAAA  990

seq1  TGTCATTTTTTTATAGATACTTTGAGATTCTATATTTCAAGCCAATGACA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTTTTTATAGATACTTTGAGATTCTATATTTCAAGCCAATGACA  1040

seq1  AGCAATGCCCAGACAACTGGTTAGCAAAGTTAACTGAATTC  1086
      |||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGCCCAGACAACTGGTTAGCAAAGTTAACTGAATTC  1081