BAC Information

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BAC

Clone NameB6Ng01-117L07
Chromosome2 (Build37)
Map Location 46,500,736 - 46,501,937
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042661, LOC100041337, LOC666604, LOC383690
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117L07.bB6Ng01-117L07.g
ACCDH922377DH922378
length1,2681,179
definitionDH922377|Mus musculus domesticus DNA, BAC clone: B6Ng01-117L07, 5' end.DH922378|Mus musculus domesticus DNA, BAC clone: B6Ng01-117L07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatttttttaatagctgagtagtactccattgtgtaaatgtacca
cattttctgtatccattcctctgttgagggacatctgggttcttttcagc
ttctggctattataaacaaggctgctatgaacatagtggagcatgtgtcc
ttcttaccggttgggacatcttctggatatatgcccacgagaggtattgt
gggatcctccggtagtactatgtccaattttctgaggaacctccagactg
atttccagagtggttgtacaagcttgcaatcccaccaaaaatggaggagt
gttcctctttctccacatcctcgccagaatctgctgtcacctgaattttt
tatcttagccattctgtctggtgtgaggtagaatctcagggttgttttga
tttgcatttccctgatgattaaggatgttgaatatttttttcaggtgctt
ctcagccattcggtattcctcaggtgagaattctttgttcatctctgaac
cccattttttaatggggttatttgattttctggagcccacattcttgagt
tctttatatatattagatattagccccctatccgatttgggataggtaaa
gatcctttcccaatctgttggtggtctttttgtcttattgacggtgtctt
ctgccttgcagaagctttgcaattttatgaggtcccatttattgattctc
gatcttacagcacaagccattgctgttctattcaggaatttttcccctgt
acccatatcttcgaggcttttccctactttctcctctataattttcagtg
tctctggctttatgtggagttccttaatccacttagatttgaccttagta
caaggagataggaatggatcaattctcattcttctacatgataactgcca
gttgtgccagcaccatttgttgaaaatgctgtcttttatccactggatgg
ttttagctcccttgtcaaagatcaagtgaccataggtgtgtgggttcatc
tctgggtcttcattctgtcatggtctacttctctgtcactataccagtac
catgtattttttatcacattgctctgtagtacagctttaggtcagcatgg
tgatccaccaataggtctttaatgttggagaatagatttccctcctaagg
tttttgtaatcgaaggaatctgcaatgcttcaatggtggagaattgaatg
atagcgaactgcatgacctgatgctttgcagagcattactattggagtcc
tgccacatcgaacgtaag
gaattcttcagggtccttcctaatatggcagagacatgggctagtacaga
tgacagaacaatggagatctgaaggagcacacagacatgcaagtacaaat
gaaactgggcatgatggatttgatcagggagttgttatcagtgataacat
tcctgattatgtcaatacctcccagagcaagtagatcagtaatacaagag
atctgctccaaagaatttcatacagtgatgaggtaatctaacattatctc
cagattaaataaagaaatgtgttgtattattagtattatccattactatg
aaaatcagtacaatataaccacctttgaacttagtttggaaaactaacat
aataaacatatatatgtacacacacatataacatatgatgcataaaacat
acacaattgttttcaaaaaggacaagggctgaaactagagagatggctca
gtggggaatagtccttgctcctcttaaagagaacacagaacttggtctcc
agcatctacacaaagctcattatagccagaaactctagtcccagagatct
gcctcactattctgccctctatgggtacctccattcaaatacacatacca
ttccccacatcatcttccacagaattacacataattaaaaataaataatt
catttaaaaatgataaacctgaaaacgatttaaatctcagtaagagcatt
gtcccacagtaaactttggctcatgacatttcttcctctacattaaaact
tcctttctgtactataaacacaaacttcaacaactgtgcaaaacattttc
aagagttattataatacaaagtataaatacaattttagtaaaaaatattc
ttttacttattccctgggatactatgaaaatgagttaacccattacaatg
agagtaataatatagcctacctttatgggtttaaattttaggacattgta
tcagcttcacatttctaaattgaactatctcacttttaaggattagtatt
acctcctccattaatttaactgtacataaggtatttaagtccatgaatat
gttttcaatccttagtagttataaaaatagctttctttctgaagttatca
gcatgaacttgggttatcagttgaaattggtggaaggtgtttttagcatc
tgaaagttgcttaatttcattgcctcgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_46500736_46501937
seq2: B6Ng01-117L07.g_66_1244

seq1  GAATTCTTCAGGGTCCTTCCTAATATGGCAGAGACATGGGCTAGTACAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGGGTCCTTCCTAATATGGCAGAGACATGGGCTAGTACAGA  50

seq1  TGACAGAACAATGGAGATCTGAAGGAGCACACAGACATGCAAGTACAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGAACAATGGAGATCTGAAGGAGCACACAGACATGCAAGTACAAAT  100

seq1  GAAACTGGGCATGATGGATTTGATCAGGGAGTTGTTATCAGTGATAACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGGGCATGATGGATTTGATCAGGGAGTTGTTATCAGTGATAACAT  150

seq1  TCCTGATTATGTCAATACCTCCCAGAGCAAGTAGATCAGTAATACAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGATTATGTCAATACCTCCCAGAGCAAGTAGATCAGTAATACAAGAG  200

seq1  ATCTGCTCCAAAGAATTTCATACAGTGATGAGGTAATCTAACATTATCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCTCCAAAGAATTTCATACAGTGATGAGGTAATCTAACATTATCTC  250

seq1  CAGATTAAATAAAGAAATGTGTTGTATTATTAGTATTATCCATTACTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTAAATAAAGAAATGTGTTGTATTATTAGTATTATCCATTACTATG  300

seq1  AAAATCAGTACAATATAACCACCTTTGAACTTAGTTTGGAAAACTAACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAGTACAATATAACCACCTTTGAACTTAGTTTGGAAAACTAACAT  350

seq1  AATAAACATATATATGTACACACACATATAACATATGATGCATAAAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACATATATATGTACACACACATATAACATATGATGCATAAAACAT  400

seq1  ACACAATTGTTTTCAAAAAGGACAAGGGCTGAAACTAGAGAGATGGCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATTGTTTTCAAAAAGGACAAGGGCTGAAACTAGAGAGATGGCTCA  450

seq1  GTGGGGAATAGTCCTTGCTCCTCTTAAAGAGAACACAGAACTTGGTCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGAATAGTCCTTGCTCCTCTTAAAGAGAACACAGAACTTGGTCTCC  500

seq1  AGCATCTACACAAAGCTCATTATAGCCAGAAACTCTAGTCCCAGAGATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTACACAAAGCTCATTATAGCCAGAAACTCTAGTCCCAGAGATCT  550

seq1  GCCTCACTATTCTGCCCTCTATGGGTACCTCCATTCAAATACACATACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCACTATTCTGCCCTCTATGGGTACCTCCATTCAAATACACATACCA  600

seq1  TTCCCCACATCATCTTCCACAGAATTACACATAATTAAAAATAAATAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCACATCATCTTCCACAGAATTACACATAATTAAAAATAAATAATT  650

seq1  CATTTAAAAATGATAAACCTGAAAACGATTTAAATCTCAGTAAGAGCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAAAATGATAAACCTGAAAACGATTTAAATCTCAGTAAGAGCATT  700

seq1  GTCCCACAGTAAACTTTGGCTCATGACATTTCTTCCTCTACATTAAAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCACAGTAAACTTTGGCTCATGACATTTCTTCCTCTACATTAAAACT  750

seq1  TCCTTTCTGTACTATAAACACAAACTTCAACAACTGTGCAAAACATTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTGTACTATAAACACAAACTTCAACAACTGTGCAAAACATTTTC  800

seq1  AAGAGTTATTATAATACAAAGTATAAATACAATTTTAGTAAAAAATATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTATTATAATACAAAGTATAAATACAATTTTAGTAAAAAATATTC  850

seq1  TTTTACTTATTCCCTGGGATACTATGAAAATGAGTTAACCCATTACAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTTATTCCCTGGGATACTATGAAAATGAGTTAACCCATTACAATG  900

seq1  AGAGTAATAATATAGCCTACCTTTATGGGTTTAAATTTTAGGACATTGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAATAATATAGCCTACCTTTATGGGTTTAAATTTTAGGACATTGTA  950

seq1  TCAGCTTCACATTTCTAAAATTGAACTATCTCCACTTTTAAGGATTAGTA  1000
      |||||||||||||||| |||||||||||||| ||||||||||||||||||
seq2  TCAGCTTCACATTTCT-AAATTGAACTATCT-CACTTTTAAGGATTAGTA  998

seq1  ATTAACCTCCTCCCATTAATTTTAACTGTACATAAGGTATTTAAGTCCAA  1050
        | ||||||| ||||||| |||||||||||||||||||||||||||| |
seq2  --TTACCTCCT-CCATTAA-TTTAACTGTACATAAGGTATTTAAGTCC-A  1043

seq1  TGAATATGTATTCAAATCCTTAGTTAAGTATATTAAAAATTAGCCTTTCT  1100
      ||||||||| ||| ||||||||||  ||| |||  |||| ||| ||||||
seq2  TGAATATGTTTTC-AATCCTTAGT--AGT-TAT--AAAAATAG-CTTTCT  1086

seq1  TTCTGAAGTTATCAGCATGAACTTTGGGTCTATCAGTTTTGAGAATGTGT  1150
      |||||||||||||||||||||| |||||| ||||||  |||| | ||   
seq2  TTCTGAAGTTATCAGCATGAAC-TTGGGT-TATCAG--TTGAAATTGGTG  1132

seq1  GAAGTTGTATTATAGCAATACTGAAAGTTTGCTTTAAATTTCATTG-CTC  1199
      |||| ||| || |||||   ||||||| ||||||  |||||||||| |||
seq2  GAAGGTGT-TTTTAGCA--TCTGAAAG-TTGCTT--AATTTCATTGCCTC  1176

seq1  GCA  1202
      |||
seq2  GCA  1179