BAC Information

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BAC

Clone NameB6Ng01-118D15
Chromosome2 (Build37)
Map Location 7,628,806 - 7,629,952
singlet/doubletsinglet
Overlap genenone
Upstream geneCugbp2, LOC100040659, LOC100040648
Downstream geneLOC672230
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118D15.bB6Ng01-118D15.g
ACCDH922762DH922763
length1,133563
definitionDH922762|Mus musculus domesticus DNA, BAC clone: B6Ng01-118D15, 5' end.DH922763|Mus musculus domesticus DNA, BAC clone: B6Ng01-118D15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttcaagatggaggtcaagtatgggagtgccagaagattctcg
ggaaattgacatcatagactgaattagaaataggaactatccagagaata
tccatgagcagaacaaagggaagcagctatgttataaaagtcatggattt
gctattgtgcaaacccagtgttagcctaacaagaaatatagcactaaaaa
aaaaaaaaaaaaaaaaatgggatttttttaaaaagctgaatttatattcc
tttccaccatagaaactcctcaagtcctttagggaatgcttacatcaaat
gctgtgccatttttaagatttttatgtgactgaaatagagactgggagta
tagctcatttgctagagtgtgagaacccatgcttactccttagtaccaca
tacactgagaactgggcttctcagtgtcacagagaacctacagtttcagc
accagggaggtgaagtcaggaggatcaggagtttaagattatcacctgct
atatagtgagtttaaggctatcctgggcaacatgagactctatgtcaaaa
aatattttagcaattttattctcacagacctaactttgttttagctagaa
cctagaaatcccctgtatttatgattgtggaaaaacactttaattttttt
aaaaaacaacttctagtggcaaaatataactactgacttggaggatagtg
agataatggtttagtgagctagactgggtagcagcaaacatagaacttat
ctagaagaggccttcaataaacttatacattatggttcttttttttaaag
ctttcaaatcatgctttgtaaagagaattttgattaaatatttttaatct
gttaattcattaaatatgcttgcatttgattgattttcttcctgccttca
tgagatcagctcaaggtcaaagattaggcctcataaaaatgtaacaggcc
tcgttactttacaaatctattctattccatgcaaattattatgttctaac
ccccacttaaaatcccccctcccaccaccatttccagtattatcagacca
gagagacgttattattaagtcatccggatggagtaaaactctcctagagt
cccagccattaagaaaataaacagagatcaaac

tatagagtttgaatactgtagcattttaaatgcttatttgagttagcaat
gtgaacttcagttagtatgggtttttcatggcttaattctaaatgtaatt
gctaaacattgttttattatgtggatgcactatatgagtaaacatatttc
aaaatccatttacatattgaaggatatcttattttctcctactttgaggt
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatataaataaaaaaaaaatatatata
tatatatatatatatatatatatatatagatagtaaaaaaaaggagttaa
taaaagagagagaaatatacttattatacacacagacacagacacagaca
cacatacacacacagatatataaatcattattaattttttatagttaaag
tcgatctctacatatctatatagatatatgtttatttttatttatttata
gacgggggatgggcggggggggtggcttttcgtttgtgtttcttttcttt
atatatatttata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_7628806_7629952
seq2: B6Ng01-118D15.b_48_1180 (reverse)

seq1  GTTTGATCTCTGTTTTATTTTTCTTTATTGGCTTGGGACTCTAGGAGAAG  50
      |||||||||||| ||||||||   ||| |||| |||||||||||||||  
seq2  GTTTGATCTCTG-TTTATTTT--CTTAATGGC-TGGGACTCTAGGAGA--  44

seq1  TTTTTACTCCATCTGGATGACCTTTAATAATAACGTCTCTCTTGGTCCTT  100
       |||||||||||| |||||||  |||||||||||||||||| |||||  |
seq2  GTTTTACTCCATCCGGATGAC--TTAATAATAACGTCTCTC-TGGTC--T  89

seq1  GATTAAATACTGGAAATGGTGGTGGGAGGGGGGAATTTTAAGTGGGGGTT  150
      |||  |||||||||||||||||||||||||||| ||||||||||||||||
seq2  GAT--AATACTGGAAATGGTGGTGGGAGGGGGG-ATTTTAAGTGGGGGTT  136

seq1  AGAACATAATAATTTGCATGGAATAGAATAGATTTGTAAAGTAACGAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATAATAATTTGCATGGAATAGAATAGATTTGTAAAGTAACGAGGC  186

seq1  CTGTTACATTTTTATGAGGCCTAATCTTTGACCTTGAGCTGATCTCATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTACATTTTTATGAGGCCTAATCTTTGACCTTGAGCTGATCTCATGA  236

seq1  AGGCAGGAAGAAAATCAATCAAATGCAAGCATATTTAATGAATTAACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGAAGAAAATCAATCAAATGCAAGCATATTTAATGAATTAACAGA  286

seq1  TTAAAAATATTTAATCAAAATTCTCTTTACAAAGCATGATTTGAAAGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATATTTAATCAAAATTCTCTTTACAAAGCATGATTTGAAAGCTT  336

seq1  TAAAAAAAAGAACCATAATGTATAAGTTTATTGAAGGCCTCTTCTAGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAGAACCATAATGTATAAGTTTATTGAAGGCCTCTTCTAGATA  386

seq1  AGTTCTATGTTTGCTGCTACCCAGTCTAGCTCACTAAACCATTATCTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTATGTTTGCTGCTACCCAGTCTAGCTCACTAAACCATTATCTCAC  436

seq1  TATCCTCCAAGTCAGTAGTTATATTTTGCCACTAGAAGTTGTTTTTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCCAAGTCAGTAGTTATATTTTGCCACTAGAAGTTGTTTTTTAAA  486

seq1  AAAATTAAAGTGTTTTTCCACAATCATAAATACAGGGGATTTCTAGGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAAAGTGTTTTTCCACAATCATAAATACAGGGGATTTCTAGGTTC  536

seq1  TAGCTAAAACAAAGTTAGGTCTGTGAGAATAAAATTGCTAAAATATTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAAAACAAAGTTAGGTCTGTGAGAATAAAATTGCTAAAATATTTTT  586

seq1  TGACATAGAGTCTCATGTTGCCCAGGATAGCCTTAAACTCACTATATAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATAGAGTCTCATGTTGCCCAGGATAGCCTTAAACTCACTATATAGC  636

seq1  AGGTGATAATCTTAAACTCCTGATCCTCCTGACTTCACCTCCCTGGTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGATAATCTTAAACTCCTGATCCTCCTGACTTCACCTCCCTGGTGCT  686

seq1  GAAACTGTAGGTTCTCTGTGACACTGAGAAGCCCAGTTCTCAGTGTATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGTAGGTTCTCTGTGACACTGAGAAGCCCAGTTCTCAGTGTATGT  736

seq1  GGTACTAAGGAGTAAGCATGGGTTCTCACACTCTAGCAAATGAGCTATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTAAGGAGTAAGCATGGGTTCTCACACTCTAGCAAATGAGCTATAC  786

seq1  TCCCAGTCTCTATTTCAGTCACATAAAAATCTTAAAAATGGCACAGCATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTCTCTATTTCAGTCACATAAAAATCTTAAAAATGGCACAGCATT  836

seq1  TGATGTAAGCATTCCCTAAAGGACTTGAGGAGTTTCTATGGTGGAAAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTAAGCATTCCCTAAAGGACTTGAGGAGTTTCTATGGTGGAAAGGA  886

seq1  ATATAAATTCAGCTTTTTAAAAAAATCCCATTTTTTTTTTTTTTTTTTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAATTCAGCTTTTTAAAAAAATCCCATTTTTTTTTTTTTTTTTTTT  936

seq1  TTAGTGCTATATTTCTTGTTAGGCTAACACTGGGTTTGCACAATAGCAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGCTATATTTCTTGTTAGGCTAACACTGGGTTTGCACAATAGCAAA  986

seq1  TCCATGACTTTTATAACATAGCTGCTTCCCTTTGTTCTGCTCATGGATAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGACTTTTATAACATAGCTGCTTCCCTTTGTTCTGCTCATGGATAT  1036

seq1  TCTCTGGATAGTTCCTATTTCTAATTCAGTCTATGATGTCAATTTCCCGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGATAGTTCCTATTTCTAATTCAGTCTATGATGTCAATTTCCCGA  1086

seq1  GAATCTTCTGGCACTCCCATACTTGACCTCCATCTTGAAATGAATTC  1147
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTCTGGCACTCCCATACTTGACCTCCATCTTGAAATGAATTC  1133


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