BAC Information

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BAC

Clone NameB6Ng01-118F13
Chromosome2 (Build37)
Map Location 115,747,849 - 115,846,862
singlet/doubletdoublet
Overlap geneMrg1
Upstream geneLOC100043222, LOC100043232, LOC100043236, BC052040
Downstream geneG630016G05Rik, 2810405F15Rik, LOC433464, Tmco5, LOC100043557
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118F13.bB6Ng01-118F13.g
ACCDH922852DH922853
length1,122707
definitionDH922852|Mus musculus domesticus DNA, BAC clone: B6Ng01-118F13, 5' end.DH922853|Mus musculus domesticus DNA, BAC clone: B6Ng01-118F13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,747,849 - 115,748,988)(115,846,156 - 115,846,862)
sequence
gaattctcactccattctacctttgagagattggtcaacataactatttt
tcttagtcagtaaccacagtagaagtttggactcttggctgatatgttat
cacaactattttgaaagccaaggtataaaagggattggatgcagagttct
tagtctgggtggggttgggattctttaattttttacagattagtgctctg
ggctatcaaggtcatgtagagtgacttgcctaggttacctgtcccttccc
ctaggcatacatctgacatctcaggggggaaggagtcagttttatgacat
gcttcctatggaatttttccatgtcaacttcaagtacagcaactagagaa
caaagccatgggtttcggtttttaattcttttcttcctaccacagttcat
tcacactgataatgaacaacactcctattaaacccctctctcttttcctc
tctcatcgtgaaacccaggaatgttattttacaatcatacatttccttca
agagattctgtgctggagggtgcataattatgaaacgcatctgttacata
aggtcctgttcagaattcactggttttcttaaacgggaaggtaaactttt
atccctgtgtcagagttgttcatagactagaaagccttttgtcataacta
tttcccaccagcatcactgaagagttatcagggggccagggagatggctc
agtgtagaagcacctcccacttcttttgcagaggacagaaattctattcc
cagaacccatgttgggaagctcacagctgcctataattccagatccaggg
tatctgggaactctgggttatcatggtgtctggatcatcatgcatacccc
caatacacatttatacatacagttaagaataaacagataaatcttttaag
tattctaatcatcccagccttggaggaaggagataattttcaatcatcta
gaattcaaccctcaggtacttcatcttcacaatcggaggcatcatccaca
atgtgcacgattgttcaggagccatatgcatagttcacaaacccctgtta
gcaaagggtaactagagcttatttaattagagtcaggcttaaattcctgc
aaatgtacaagaaaagatgata
gaattcagaatcagatgctagaaatgtaagggaatttcctaaaattattc
cagctctttcccttacccccactgtctgatacagaacttacaggaaacaa
acgggctgtcttgcaaatgtctgttatgagagaggaagctcgcttctgct
tccccaccagctcgtggatgagacctgtgtctttgagctgttttcctgca
gggcattaagcttgcgcaaaggatttggtggccttaggtgggtctgtgga
ggtgggggtggggcaagaaaatgagtccattgctctaaaagcattcccag
tagcgatggtcttggcggaaacaaaactccattgtgcagggctgaaacct
gagaaaccccctgtttctctgcttgttttagtcaccagcattgatcctgg
aacatgtgaccctttgagagggagcacccttggtgactcctcctattact
aaataccattgtgtttataatggccatttatatatggttacactccacgc
ctgtgtgcttaataggcattctggaactccgatgccacctcactagcaca
ggacacatgctttgcttggccccttggtcactcttttaccctaccctgtc
ttgtgtcattgcttgataccctctatgagaaccaagtaggaagcttatca
tcactgtgcagagggcagtctggattctgtgaggtgttggaaggtggggg
taaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_115747849_115748988
seq2: B6Ng01-118F13.b_45_1166

seq1  GAATTCTCACTCCATTCTACCTTTGAGAGATTGGTCAACATAACTATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACTCCATTCTACCTTTGAGAGATTGGTCAACATAACTATTTT  50

seq1  TCTTAGTCAGTAACCACAGTAGAAGTTTGGACTCTTGGCTGATATGTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTCAGTAACCACAGTAGAAGTTTGGACTCTTGGCTGATATGTTAT  100

seq1  CACAACTATTTTGAAAGCCAAGGTATAAAAGGGATTGGATGCAGAGTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACTATTTTGAAAGCCAAGGTATAAAAGGGATTGGATGCAGAGTTCT  150

seq1  TAGTCTGGGTGGGGTTGGGATTCTTTAATTTTTTACAGATTAGTGCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTGGGTGGGGTTGGGATTCTTTAATTTTTTACAGATTAGTGCTCTG  200

seq1  GGCTATCAAGGTCATGTAGAGTGACTTGCCTAGGTTACCTGTCCCTTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATCAAGGTCATGTAGAGTGACTTGCCTAGGTTACCTGTCCCTTCCC  250

seq1  CTAGGCATACATCTGACATCTCAGGGGGGAAGGAGTCAGTTTTATGACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCATACATCTGACATCTCAGGGGGGAAGGAGTCAGTTTTATGACAT  300

seq1  GCTTCCTATGGAATTTTTCCATGTCAACTTCAAGTACAGCAACTAGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTATGGAATTTTTCCATGTCAACTTCAAGTACAGCAACTAGAGAA  350

seq1  CAAAGCCATGGGTTTCGGTTTTTAATTCTTTTCTTCCTACCACAGTTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCATGGGTTTCGGTTTTTAATTCTTTTCTTCCTACCACAGTTCAT  400

seq1  TCACACTGATAATGAACAACACTCCTATTAAACCCCTCTCTCTTTTCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACTGATAATGAACAACACTCCTATTAAACCCCTCTCTCTTTTCCTC  450

seq1  TCTCATCGTGAAACCCAGGAATGTTATTTTACAATCATACATTTCCTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCGTGAAACCCAGGAATGTTATTTTACAATCATACATTTCCTTCA  500

seq1  AGAGATTCTGTGCTGGAGGGTGCATAATTATGAAACGCATCTGTTACATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTCTGTGCTGGAGGGTGCATAATTATGAAACGCATCTGTTACATA  550

seq1  AGGTCCTGTTCAGAATTCACTGGTTTTCTTAAACGGGAAGGTAAACTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCTGTTCAGAATTCACTGGTTTTCTTAAACGGGAAGGTAAACTTTT  600

seq1  ATCCCTGTGTCAGAGTTGTTCATAGACTAGAAAGCCTTTTGTCATAACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGTGTCAGAGTTGTTCATAGACTAGAAAGCCTTTTGTCATAACTA  650

seq1  TTTCCCACCAGCATCACTGAAGAGTTATCAGGGGGCCAGGGAGATGGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCACCAGCATCACTGAAGAGTTATCAGGGGGCCAGGGAGATGGCTC  700

seq1  AGTGTAGAAGCACCTCCCACTTCTTTTGCAGAGGACAGAAATTCTATTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAGAAGCACCTCCCACTTCTTTTGCAGAGGACAGAAATTCTATTCC  750

seq1  CAGAACCCATGTTGGGAAGCTCACAGCTGCCTATAATTCCAGATCCAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCCATGTTGGGAAGCTCACAGCTGCCTATAATTCCAGATCCAGGG  800

seq1  TATCTGGGAACTCTGGGTTATCATGGTGTCTGGATCATCATGCATACCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGGAACTCTGGGTTATCATGGTGTCTGGATCATCATGCATACCCC  850

seq1  CAATACACATTTATACATACAGTTAAGAATAAAACAGATAAATCTTTTAA  900
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CAATACACATTTATACATACAGTTAAGAAT-AAACAGATAAATCTTTTAA  899

seq1  GTATTCTAATCATCCCAGCCTTGGAGGAAGGAGATAATTTTCAATCATCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTAATCATCCCAGCCTTGGAGGAAGGAGATAATTTTCAATCATCT  949

seq1  AAGAATTCAACCCTCAGGTACTTCATCTTCCACAATCGGAGGCATCATCC  1000
       |||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  -AGAATTCAACCCTCAGGTACTTCATCTT-CACAATCGGAGGCATCATCC  997

seq1  ACAATGTGCACGATTGTTCAAGAGCCCATATGCCATAGGTTCAACCAAAC  1050
      |||||||||||||||||||| ||| ||||||| |||| |||||  |||| 
seq2  ACAATGTGCACGATTGTTCAGGAG-CCATATG-CATA-GTTCA--CAAA-  1041

seq1  CCCCTGTATAGCAAAAGGGTTAACTAGAGCTGTATTAATATAGAAGTCAG  1100
      ||||||| |||||||  || ||||||||||| |||| |  ||| ||||||
seq2  CCCCTGT-TAGCAAA--GGGTAACTAGAGCT-TATTTAATTAG-AGTCAG  1086

seq1  GCTTTTAATATTCTGCAAATGTTAACAAAGAAAGATGATA  1140
      ||  ||||  | ||||||||||  ||||  ||||||||||
seq2  GC--TTAAATTCCTGCAAATGT--ACAAGAAAAGATGATA  1122

seq1: chr2_115846156_115846862
seq2: B6Ng01-118F13.g_69_775 (reverse)

seq1  TCCCTTACCCCCACCTTCCAACACCTCACAGAATCCAGACTGCCCTCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTACCCCCACCTTCCAACACCTCACAGAATCCAGACTGCCCTCTGC  50

seq1  ACAGTGATGATAAGCTTCCTACTTGGTTCTCATAGAGGGTATCAAGCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGATGATAAGCTTCCTACTTGGTTCTCATAGAGGGTATCAAGCAAT  100

seq1  GACACAAGACAGGGTAGGGTAAAAGAGTGACCAAGGGGCCAAGCAAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAAGACAGGGTAGGGTAAAAGAGTGACCAAGGGGCCAAGCAAAGCA  150

seq1  TGTGTCCTGTGCTAGTGAGGTGGCATCGGAGTTCCAGAATGCCTATTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCTGTGCTAGTGAGGTGGCATCGGAGTTCCAGAATGCCTATTAAG  200

seq1  CACACAGGCGTGGAGTGTAACCATATATAAATGGCCATTATAAACACAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGGCGTGGAGTGTAACCATATATAAATGGCCATTATAAACACAAT  250

seq1  GGTATTTAGTAATAGGAGGAGTCACCAAGGGTGCTCCCTCTCAAAGGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTAGTAATAGGAGGAGTCACCAAGGGTGCTCCCTCTCAAAGGGTC  300

seq1  ACATGTTCCAGGATCAATGCTGGTGACTAAAACAAGCAGAGAAACAGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTCCAGGATCAATGCTGGTGACTAAAACAAGCAGAGAAACAGGGG  350

seq1  GTTTCTCAGGTTTCAGCCCTGCACAATGGAGTTTTGTTTCCGCCAAGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCAGGTTTCAGCCCTGCACAATGGAGTTTTGTTTCCGCCAAGACC  400

seq1  ATCGCTACTGGGAATGCTTTTAGAGCAATGGACTCATTTTCTTGCCCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCTACTGGGAATGCTTTTAGAGCAATGGACTCATTTTCTTGCCCCAC  450

seq1  CCCCACCTCCACAGACCCACCTAAGGCCACCAAATCCTTTGCGCAAGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCTCCACAGACCCACCTAAGGCCACCAAATCCTTTGCGCAAGCTT  500

seq1  AATGCCCTGCAGGAAAACAGCTCAAAGACACAGGTCTCATCCACGAGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCCTGCAGGAAAACAGCTCAAAGACACAGGTCTCATCCACGAGCTG  550

seq1  GTGGGGAAGCAGAAGCGAGCTTCCTCTCTCATAACAGACATTTGCAAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGAAGCAGAAGCGAGCTTCCTCTCTCATAACAGACATTTGCAAGAC  600

seq1  AGCCCGTTTGTTTCCTGTAAGTTCTGTATCAGACAGTGGGGGTAAGGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCGTTTGTTTCCTGTAAGTTCTGTATCAGACAGTGGGGGTAAGGGAA  650

seq1  AGAGCTGGAATAATTTTAGGAAATTCCCTTACATTTCTAGCATCTGATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGGAATAATTTTAGGAAATTCCCTTACATTTCTAGCATCTGATTC  700

seq1  TGAATTC  707
      |||||||
seq2  TGAATTC  707