BAC Information

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BAC

Clone NameB6Ng01-118H03
Chromosome13 (Build37)2 (Build37)
Map Location 91,844,087 - 91,845,346130,610,451 - 130,610,594
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG435376, Rps23, Atg10, LOC100042959, Ssbp2, LOC666889
Downstream geneAcot12, Zcchc9, Ckmt2, Rasgrf2, Rasgrf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118H03.bB6Ng01-118H03.g
ACCDH922921DH922922
length1,256872
definitionDH922921|Mus musculus domesticus DNA, BAC clone: B6Ng01-118H03, 5' end.DH922922|Mus musculus domesticus DNA, BAC clone: B6Ng01-118H03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(91,844,087 - 91,845,346)(130,610,451 - 130,610,594)
sequence
gaattctatgtataaatatttctccatctttacatctgaaacaataacat
gtccttccaatcatttgcctaacatatagtttatatattgttaattgtct
taatgcaaagaaagtaaatatttttgaagtttgatctaaatccacacaca
aacgtcagtcagcactttatgtcaagagaaatctctgtaagttttgcaaa
aaatttagatctttactcaaatcatgcaagatggacaggttatttgaagt
gctgttttcaaataaatggctaattacatttaaccaacaatgttacaaag
acacacaggaacttagcttacagcatactatgtagactgtagtctcctgt
aagggacccaagcctcaccctcaggtgatacactgggaccaattgtcaca
aaagaaaagtgaaatgtaataactgggaacaagtatttatattgtttttc
aaggaatagtaacacttacctttgccaaagcaacagcccatcttgcttta
gaaatgaaacactaagtgtttgagaagcagatcgtaagattccagtgact
gggacagtcaaagtgaagcaaacgtttatcctaatcagacccagtaaatg
catacattgaaaacactcagtcccacattaaatgctgtaacatttacata
tttcattttagtgctgtattccattttaaaaatgtatacagcaaaaacta
ttcacatttcaatttaaactccatacagaattgattcttttactcaagaa
acaaattctgtaagttaccacgggaaactccacagaggaaactcctctga
gactcagtcagttggatatctttcttcataataaagtctacagaagtcat
tgaaagtctcagatgtgtgtttatcattaggtcatccaaactgaattacc
gttcatgggtaaagttaacactttaggggatatcaatccaacctcttata
aacaaatgtgtacaataggaatctataattactgcatgatttctgacaag
ctcagtatgaaggccaatgctgagaagctaaatctgggcctggaaaacta
ctcctgcttatatattgttcaatatatagaatagtgtgtctccctctctt
gctattccaaatacttgtatcagatttctccccatgaaataaaatgtcaa
aagaaaaaaatggttttacctattatcaacagttgctatttaaataacgg
atcctagtagaagtggggttggagcaaatttatgctgtgtcactctccca
ccatat
gaattcttttctccatctatggtgattgaaattttgctgagtatagtggt
cttgactgccatctgtgatgccttaaagcctgcatcatatctgtccaagc
ccttctggcttttagagtctccattgcaaagttgggtataattctgacag
atctgtctttatacgttacttggtccttctcccttgaaacttttggtatt
ctttccttgttctacacatgtattgttttgattattatatggtgatggat
gggccttccttctctggtcctatctatttggttttctgttctcttcctgt
acctttataggcatgtccttccttagttgggaaaattttcttctgtgatt
ttggtcctttgagctgggaatcttctgttcctgatattcgtaggtttggc
ctgttcatagagtcctagatttactggatgttttgtgtcaggagtttgtt
ttagatttaacattttctttgactggtgtatctatgtcttcctggtatct
ccagtgtttgagattctctcttccatctcttctctgctgttggtgatgct
tctgtctgaacttcctactgacttacctagatttttccatttccagaaat
tccttggtttgtgttttcaagttttgaatagttttgttttcttcacgtgt
ttgcttgttttgtcttggcttttttgacacatttatttatttatttattt
atttatttgtttgtttgtttgtttgtttgttttgttttgttttttcgaga
cagggtttctctgtgtagccctggctgtcctggaactcatgtgtagacca
ggctggcctcgaactcagaaatccgcctgcctctgcctcccgagtgctgg
gattaaaggcgtgtgccaccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_91844087_91845346
seq2: B6Ng01-118H03.b_47_1302 (reverse)

seq1  ATATGTTGGGAGA-TG--ACAGCATAAATTTTGCTTCTAAACCCCACTTC  47
      ||||| ||||||| ||  |||||||||| |||||| |  |||||||||||
seq2  ATATGGTGGGAGAGTGACACAGCATAAA-TTTGCTCC--AACCCCACTTC  47

seq1  TACTAAGATCATGTTATTTTATATAGC-ACTGTTGATAAATAGT-AAACA  95
      ||||| ||||  |||| |||| ||||| |||||||||||   || |||| 
seq2  TACTAGGATC-CGTTA-TTTAAATAGCAACTGTTGATAATAGGTAAAACC  95

seq1  TTTTTTTTCTTTTGACATTTTATTTCATTGGTGAGATATCTGATACAAGT  145
       |||||||||||||||||||||||||| ||| |||| |||||||||||| 
seq2  ATTTTTTTCTTTTGACATTTTATTTCA-TGGGGAGAAATCTGATACAAG-  143

seq1  TATTTGGAATAGCAAGAGAGGAGAACACCACTATTCTATATATTGAACAA  195
      |||||||||||||||||||||   ||| ||||||||||||||||||||||
seq2  TATTTGGAATAGCAAGAGAGGGAGACA-CACTATTCTATATATTGAACAA  192

seq1  TATATAAGCAGGAGTAGTTTTCCCAGGCCCAGATTTAGCTTCTCAGCATT  245
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TATATAAGCAGGAGTAGTTTT-CCAGGCCCAGATTTAGCTTCTCAGCATT  241

seq1  GGCCTTCATACTGAGCTTGTCAGAAATCATGCAGTAATTATAGATTCCTA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCATACTGAGCTTGTCAGAAATCATGCAGTAATTATAGATTCCTA  291

seq1  TTGTACACATTTGTTTATAAGAGGTTGGATTGATATCCCCTAAAGTGTTA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACACATTTGTTTATAAGAGGTTGGATTGATATCCCCTAAAGTGTTA  341

seq1  ACTTTACCCATGAACGGTAATTCAGTTTGGATGACCTAATGATAAACACA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTACCCATGAACGGTAATTCAGTTTGGATGACCTAATGATAAACACA  391

seq1  CATCTGAGACTTTCAATGACTTCTGTAGACTTTATTATGAAGAAAGATAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGAGACTTTCAATGACTTCTGTAGACTTTATTATGAAGAAAGATAT  441

seq1  CCAACTGACTGAGTCTCAGAGGAGTTTCCTCTGTGGAGTTTCCCGTGGTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTGACTGAGTCTCAGAGGAGTTTCCTCTGTGGAGTTTCCCGTGGTA  491

seq1  ACTTACAGAATTTGTTTCTTGAGTAAAAGAATCAATTCTGTATGGAGTTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACAGAATTTGTTTCTTGAGTAAAAGAATCAATTCTGTATGGAGTTT  541

seq1  AAATTGAAATGTGAATAGTTTTTGCTGTATACATTTTTAAAATGGAATAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGAAATGTGAATAGTTTTTGCTGTATACATTTTTAAAATGGAATAC  591

seq1  AGCACTAAAATGAAATATGTAAATGTTACAGCATTTAATGTGGGACTGAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTAAAATGAAATATGTAAATGTTACAGCATTTAATGTGGGACTGAG  641

seq1  TGTTTTCAATGTATGCATTTACTGGGTCTGATTAGGATAAACGTTTGCTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCAATGTATGCATTTACTGGGTCTGATTAGGATAAACGTTTGCTT  691

seq1  CACTTTGACTGTCCCAGTCACTGGAATCTTACGATCTGCTTCTCAAACAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGACTGTCCCAGTCACTGGAATCTTACGATCTGCTTCTCAAACAC  741

seq1  TTAGTGTTTCATTTCTAAAGCAAGATGGGCTGTTGCTTTGGCAAAGGTAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTTTCATTTCTAAAGCAAGATGGGCTGTTGCTTTGGCAAAGGTAA  791

seq1  GTGTTACTATTCCTTGAAAAACAATATAAATACTTGTTCCCAGTTATTAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTACTATTCCTTGAAAAACAATATAAATACTTGTTCCCAGTTATTAC  841

seq1  ATTTCACTTTTCTTTTGTGACAATTGGTCCCAGTGTATCACCTGAGGGTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACTTTTCTTTTGTGACAATTGGTCCCAGTGTATCACCTGAGGGTG  891

seq1  AGGCTTGGGTCCCTTACAGGAGACTACAGTCTACATAGTATGCTGTAAGC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGGGTCCCTTACAGGAGACTACAGTCTACATAGTATGCTGTAAGC  941

seq1  TAAGTTCCTGTGTGTCTTTGTAACATTGTTGGTTAAATGTAATTAGCCAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCCTGTGTGTCTTTGTAACATTGTTGGTTAAATGTAATTAGCCAT  991

seq1  TTATTTGAAAACAGCACTTCAAATAACCTGTCCATCTTGCATGATTTGAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGAAAACAGCACTTCAAATAACCTGTCCATCTTGCATGATTTGAG  1041

seq1  TAAAGATCTAAATTTTTTGCAAAACTTACAGAGATTTCTCTTGACATAAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATCTAAATTTTTTGCAAAACTTACAGAGATTTCTCTTGACATAAA  1091

seq1  GTGCTGACTGACGTTTGTGTGTGGATTTAGATCAAACTTCAAAAATATTT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGACTGACGTTTGTGTGTGGATTTAGATCAAACTTCAAAAATATTT  1141

seq1  ACTTTCTTTGCATTAAGACAATTAACAATATATAAACTATATGTTAGGCA  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTTGCATTAAGACAATTAACAATATATAAACTATATGTTAGGCA  1191

seq1  AATGATTGGAAGGACATGTTATTGTTTCAGATGTAAAGATGGAGAAATAT  1245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTGGAAGGACATGTTATTGTTTCAGATGTAAAGATGGAGAAATAT  1241

seq1  TTATACATAGAATTC  1260
      |||||||||||||||
seq2  TTATACATAGAATTC  1256

seq1: chr2_130610451_130610594
seq2: B6Ng01-118H03.g_796_938

seq1  TTTTTTTTTGGTTTTTTGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTC  50
      |||| ||||| ||||| |||||||||||||||||| ||||||||||||||
seq2  TTTTGTTTTGTTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTC  50

seq1  CTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCT  100
      |||||||||| | |||||||||||||||||||||||||||||||| ||||
seq2  CTGGAACTCA-TGTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCT  99

seq1  GCCTCTGCCTCCTGAGTGCTGGGATTAAAGGCGTGTGCCACCAC  144
      |||||||||||| |||||||||||||||||||||||||||||||
seq2  GCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGTGCCACCAC  143