BAC Information

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BAC

Clone NameB6Ng01-119G22
Chromosome2 (Build37)
Map Location 18,569,533 - 18,690,685
singlet/doubletdoublet
Overlap geneLOC625815, Commd3, Bmi1, EG667477, LOC100041448, BC061194, LOC667493, LOC100041479
Upstream geneNebl, LOC100041319, LOC100041047, 1700113O17Rik, A930004D18Rik, 2810030E01Rik, Mllt10, LOC641254, Dnajc1, LOC100041388, LOC623325
Downstream genePip5k2a, 4930426L09Rik, LOC667521, Armc3, Msrb2, LOC100041196, Ptf1a, LOC100041534, 4921504E06Rik, LOC100041244, Otud1, LOC667564
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119G22.bB6Ng01-119G22.g
ACCDH923646DH923647
length978973
definitionDH923646|Mus musculus domesticus DNA, BAC clone: B6Ng01-119G22, 5' end.DH923647|Mus musculus domesticus DNA, BAC clone: B6Ng01-119G22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(18,569,533 - 18,570,539)(18,689,712 - 18,690,685)
sequence
gaattcctggtctctagacactagggttatttaacttatcttttattctg
gaagctccttcagttttccccaaacacagtggggatacagtcactggagc
tttcttgctttcttccttctcagatatcccacctttgtgaatttctgatg
tcaccccaccccaccccaccccacccccgtccctgtctctctctgtatgt
ctgcttttgttcctgtctatctctgtgtctgtctgtgtctgtctgtgtct
gtccgtctctctctctctctctctctctctctctctcttttttatatttt
taagatttatttattttatgtatgtgagaacactgttgctgtcttcagac
acacagaagagggcatcagatcctattacagatggttgtgagccaccatg
tggttgctggaattagaactcaggatctctggaagagcagtcagtgctgt
taacccctgatccatctctgcagcaccagtccatgtttttttattctggc
tctcttttaccaggtcacatggaaataacatcttgtctttcaacttttca
cacataagtttggaattattttctaagttctgtattggtctgttcattgt
tggtttatagaaaatcggtttcagtacttcggctaggtgtagtagaatcc
tagccacttggaatcctagctactcatgaagctgaggcagaagatatgtg
gagcccaggagctcatgacaagcttagggaacatagcatgatcccatcta
aaaaaaaaaaaaagaataaaaccaaacctgttttattgagtgttaacctc
tcactttgcagcttcgagaatttgccttctgggttgcatgcttagtgttg
caatctttgagcaacccctacttctgatgacctttctcattacaaatact
tctacttctctttgtttgcaaatagatatgcttgtcgttacattttccat
agctcgctcccttcccttcccttccctt
gaattccttgtgggtagctggcttgtctgagatggggggaggggatccca
cttaagtacttcatatcatttttctctaaactagggaggttcgcccagtt
tccaaccctccaggtgtgtctttaagagtgtataatgttgtctaggtact
cttcaaagactcacagtggctggccatgaacactcctggcagtgccacag
actggagggaactctgtaactgcacatcagtgaagaacagtgtgggcttc
cattttccttgtgcacgttaggtgagttcacatcagagtccctagactga
gaagaagaagagaggaaagagatctttttcttccttatgagttcttgagt
caaaaagtaaaagcgagttaagaaccattttccttgtgtcctgtggtatg
tttatcctcaactcacaggacctttaagtaatgcttttttttttttaact
tgctgattcagtaaatatctgcaatgctgtatatattgccaaataacata
ctaggctccagggaaaaaaagtgaactcctgtgtttttttgttgttgttg
ttgttgttttgttttttttttttttagtaggtttacaggaaggagagaaa
ccaataagcaaatacataaactgtatgcaaaaggtttaaaatgtcatgac
tgtgggaggtaattggcgaaaagtagttctaaagccagccttgagctcac
attccgccttgctggtattatttatttgctattacttatttgttttctca
ttcctgacaggttgtatgaaacaaatagatgatgacttcttagacttcag
ttttcttcccacgttgctttggatagtcttaaatcataggacccctaacc
ctaattctaacacaggtcaattctctccctaggcccgaggtcacattgct
tctgcaagggttgcacaccatccgaggaggcctcatattctttttccttc
tctctctcctcttctcttatctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_18569533_18570539
seq2: B6Ng01-119G22.b_48_1025

seq1  GAATTCCTGGTCTCTAGACACTAGGGTTATTTAACTTATCTTTTATTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGTCTCTAGACACTAGGGTTATTTAACTTATCTTTTATTCTG  50

seq1  GAAGCTCCTTCAGTTTTCCCCAAACACAGTGGGGATACAGTCACTGGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTCCTTCAGTTTTCCCCAAACACAGTGGGGATACAGTCACTGGAGC  100

seq1  TTTCTTGCTTTCTTCCTTCTCAGATATCCCACCTTTGTGAATTTCTGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGCTTTCTTCCTTCTCAGATATCCCACCTTTGTGAATTTCTGATG  150

seq1  TCACCCCACCCCACCCCACCCCACCCCCGTCCCTGTCTCTCTCTGTATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCCACCCCACCCCACCCCACCCCCGTCCCTGTCTCTCTCTGTATGT  200

seq1  CTGCTTTTGTTCCTGTCTATCTCTGTGTCTGTCTGTGTCTGTCTGTGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTTGTTCCTGTCTATCTCTGTGTCTGTCTGTGTCTGTCTGTGTCT  250

seq1  GTCCGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTTATATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTTATATTTT  300

seq1  TAAGATTTATTTATTTTATGTATGTGAGAACACTGTTGCTGTCTTCAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTTATTTATTTTATGTATGTGAGAACACTGTTGCTGTCTTCAGAC  350

seq1  ACACAGAAGAGGGCATCAGATCCTATTACAGATGGTTGTGAGCCACCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAAGAGGGCATCAGATCCTATTACAGATGGTTGTGAGCCACCATG  400

seq1  TGGTTGCTGGAATTAGAACTCAGGATCTCTGGAAGAGCAGTCAGTGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGCTGGAATTAGAACTCAGGATCTCTGGAAGAGCAGTCAGTGCTGT  450

seq1  TAACCCCTGATCCATCTCTGCAGCACCAGTCCATGTTTTTTTATTCTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCCTGATCCATCTCTGCAGCACCAGTCCATGTTTTTTTATTCTGGC  500

seq1  TCTCTTTTACCAGGTCACATGGAAATAACATCTTGTCTTTCAACTTTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTTACCAGGTCACATGGAAATAACATCTTGTCTTTCAACTTTTCA  550

seq1  CACATAAGTTTGGAATTATTTTCTAAGTTCTGTATTGGTCTGTTCATTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAAGTTTGGAATTATTTTCTAAGTTCTGTATTGGTCTGTTCATTGT  600

seq1  TGGTTTATAGAAAATCGGTTTCAGTACTTCGGCTAGGTGTAGTAGAATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTATAGAAAATCGGTTTCAGTACTTCGGCTAGGTGTAGTAGAATCC  650

seq1  TAGCCACTTGGAATCCTAGCTACTCATGAAGCTGAGGCAGAAGATATGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCACTTGGAATCCTAGCTACTCATGAAGCTGAGGCAGAAGATATGTG  700

seq1  GAGCCCAGGAGCTCATGACAAGCTTAGGGAACATAGCAGGATCCCATCTA  750
      |||||||||||||||||||||||||||||||||||||| |||||||||| 
seq2  GAGCCCAGGAGCTCATGACAAGCTTAGGGAACATAGCATGATCCCATCT-  749

seq1  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATAAAACC  800
                                ||||||||||||||||||||||||
seq2  --------------------------AAAAAAAAAAAAAAGAATAAAACC  773

seq1  AAACCTGTTTTATTGAGTGTTAACCTCTCACTTTGCAGCTTCGAGAATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTGTTTTATTGAGTGTTAACCTCTCACTTTGCAGCTTCGAGAATTT  823

seq1  GCCTTCTGGTTGCCATGCTTAGTGTTGCAATCTTTGAGCAACCCCTACTT  900
      ||||||||| |  |||||||||||||||||||||||||||||||||||||
seq2  GCCTTCTGGGTTGCATGCTTAGTGTTGCAATCTTTGAGCAACCCCTACTT  873

seq1  CTGATGACCTTTCTCATTACAAATACTTCTACTTCTCTTTGTTTGCAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTGATGACCTTTCTCATTACAAATACTTCTACTTCTCTTTGTTTGCAAA-  922

seq1  TAGATATGCTTTGTCGTTACATTTTCCATAGCTCGCTCCCTTCCCTTCCC  1000
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATGC-TTGTCGTTACATTTTCCATAGCTCGCTCCCTTCCCTTCCC  971

seq1  TTCCCTT  1007
      |||||||
seq2  TTCCCTT  978

seq1: chr2_18689712_18690685
seq2: B6Ng01-119G22.g_66_1038 (reverse)

seq1  AAGAGAAGAGAAGAGAAGAGA-AG-AGAAAAAAGAATATGAGGCCTCCTC  48
      |||| |||||||||| ||||| || || ||||||||||||||||||||||
seq2  AAGATAAGAGAAGAGGAGAGAGAGAAGGAAAAAGAATATGAGGCCTCCTC  50

seq1  GGGATGGTGTGCAACCCTTGGCAGAAGCAATGTGACCTCGGGGCCTAGGG  98
       |||||||||||||||||| ||||||||||||||||||| ||||||| ||
seq2  -GGATGGTGTGCAACCCTT-GCAGAAGCAATGTGACCTC-GGGCCTA-GG  96

seq1  GAGGGAATTGACCTGTGTTAGAATTAGGGTTAGGGGTCCTATGATTTAAG  148
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAATTGACCTGTGTTAGAATTAGGGTTAGGGGTCCTATGATTTAAG  146

seq1  ACTATCCAAAGCAAACGTGGGAAG-AAACTGAAGTCTAAGAAGTCATCAT  197
      |||||||||||| ||||||||||| |||||||||||||||||||||||||
seq2  ACTATCCAAAGC-AACGTGGGAAGAAAACTGAAGTCTAAGAAGTCATCAT  195

seq1  CTATTTG-TTCATACAACCTGTCAGGAATGAGAAAACAAATAAGTAATAG  246
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTGTTTCATACAACCTGTCAGGAATGAGAAAACAAATAAGTAATAG  245

seq1  CAAATAAATAATACCAGCAAGGCGGAATGTGAGCTCAAGGCTGGCTTTAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAATAATACCAGCAAGGCGGAATGTGAGCTCAAGGCTGGCTTTAG  295

seq1  AACTACTTTTCGCCAATTACCTCCCACAGTCATGACATTTTAAACCTTTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACTTTTCGCCAATTACCTCCCACAGTCATGACATTTTAAACCTTTT  345

seq1  GCATACAGTTTATGTATTTGCTTATTGGTTTCTCTCCTTCCTGTAAACCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACAGTTTATGTATTTGCTTATTGGTTTCTCTCCTTCCTGTAAACCT  395

seq1  ACTAAAAAAAAAAAAAACAAAACAACAACAACAACAACAAAAAAACACAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAAAAAAAAAAACAAAACAACAACAACAACAACAAAAAAACACAG  445

seq1  GAGTTCACTTTTTTTCCCTGGAGCCTAGTATGTTATTTGGCAATATATAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCACTTTTTTTCCCTGGAGCCTAGTATGTTATTTGGCAATATATAC  495

seq1  AGCATTGCAGATATTTACTGAATCAGCAAGTTAAAAAAAAAAAAGCATTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGCAGATATTTACTGAATCAGCAAGTTAAAAAAAAAAAAGCATTA  545

seq1  CTTAAAGGTCCTGTGAGTTGAGGATAAACATACCACAGGACACAAGGAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGGTCCTGTGAGTTGAGGATAAACATACCACAGGACACAAGGAAA  595

seq1  ATGGTTCTTAACTCGCTTTTACTTTTTGACTCAAGAACTCATAAGGAAGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTCTTAACTCGCTTTTACTTTTTGACTCAAGAACTCATAAGGAAGA  645

seq1  AAAAGATCTCTTTCCTCTCTTCTTCTTCTCAGTCTAGGGACTCTGATGTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATCTCTTTCCTCTCTTCTTCTTCTCAGTCTAGGGACTCTGATGTG  695

seq1  AACTCACCTAACGTGCACAAGGAAAATGGAAGCCCACACTGTTCTTCACT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACCTAACGTGCACAAGGAAAATGGAAGCCCACACTGTTCTTCACT  745

seq1  GATGTGCAGTTACAGAGTTCCCTCCAGTCTGTGGCACTGCCAGGAGTGTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGCAGTTACAGAGTTCCCTCCAGTCTGTGGCACTGCCAGGAGTGTT  795

seq1  CATGGCCAGCCACTGTGAGTCTTTGAAGAGTACCTAGACAACATTATACA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCCAGCCACTGTGAGTCTTTGAAGAGTACCTAGACAACATTATACA  845

seq1  CTCTTAAAGACACACCTGGAGGGTTGGAAACTGGGCGAACCTCCCTAGTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAAGACACACCTGGAGGGTTGGAAACTGGGCGAACCTCCCTAGTT  895

seq1  TAGAGAAAAATGATATGAAGTACTTAAGTGGGATCCCCTCCCCCCATCTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAAAATGATATGAAGTACTTAAGTGGGATCCCCTCCCCCCATCTC  945

seq1  AGACAAGCCAGCTACCCACAAGGAATTC  974
      ||||||||||||||||||||||||||||
seq2  AGACAAGCCAGCTACCCACAAGGAATTC  973