BAC Information

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BAC

Clone NameB6Ng01-120A08
Chromosome2 (Build37)
Map Location 111,260,185 - 111,460,299
singlet/doubletdoublet
Overlap geneOlfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822
Upstream geneSlc5a12, Muc15, LOC668802, LOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285
Downstream geneOlfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120A08.bB6Ng01-120A08.g
ACCDH924080DH924081
length9921,093
definitionDH924080|Mus musculus domesticus DNA, BAC clone: B6Ng01-120A08, 5' end.DH924081|Mus musculus domesticus DNA, BAC clone: B6Ng01-120A08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,260,185 - 111,261,175)(111,459,194 - 111,460,299)
sequence
gaattcatttgtgacttatcagcttctttatggcatttttaatatcttta
tttctcagtgtgtagatggctggattcaggagaggtgtgatgactgagta
aaatacagccagaaacttgtcaacccaggtgatgctaactggccacagat
agatgaaaatgatgggcccaaagaacagcagaaccactatgatatgggat
gtgcatgtagatagggcttttgatgagccatctttagagcgatgttgaac
agttaatagaatgtaagtataagatacaagcaagaggatgaaacaagttg
ttgctaaaatgccactgtcagcatttattaggatttccagagtatcagta
ttcatgcaggctaatttcatcaccaaaggaatatcacagaaaaagctgtc
tatcactctaggtccacagaaaggtagatccaaaatcaagagcatctgac
taatggcatgcacaaatccaacaatccatggaatcacaaggaaccagatg
cacttctgtctgtccatgatgctgctgtagtggagtggcctgcagatggc
cacataccggtcataggccattgttacaagaagtaccatctcacctcctg
caaagaagtgcacacagacgatctggctcatacaccctacaaaggaaatg
gttttattttcttttaggagatctatagtcagtttgggggtggttactga
gcaaaggcagaagtcaataaatgatagattagctaacaagaagtacatgg
gagaatggagatgatgatcaatgatgatcaatatcacaacaaacaggttg
cctaccacagccatcatgtagaggatggaaaatggcagtaagaggaagat
ctcaagttgccttgaggaacacagtccctgaaaaataaactcagaagcca
cagtatgattagagtcttccattaaataaataacactaaaggacctgcag
aaagagacagatgtgtgtgtgtgtgtgtgtgtgtgtgtgaga
gaattcaatggccttactcaatgctggaaattgcatgggaaaatacagag
ctacctggcaagatgtgtccagtactgtagacaaatttggctgtagtcta
atgggaaccaactattttttaatgcctcttccaaaggagagaatttatac
ctagtgctgtaaagttcagtaaattagaaaccattcaagcagtttattag
tttcagattttatatttagtgtatttaactcatttggagttgactttttt
tttttttaaactccagatttaccaacattggctaaagattctgtttctgt
ttcatgtattattttgtcatctttgctgaaagccagggcattgtaaattt
gttgacttaagtaaaaatcttctagtgtataatattaatttagtcaatgg
tagacaacaataactttgctgtgctcttttgattattattgctttgtcgt
ataacttgagctcatgtataataatccagtgtgcacttttgtttgttttt
atattttgttattggttttgctcatgaatgctctagtgacctttatattt
ccaaatagttcttattcaggacctttttaaaatgtgattgtgattattta
agaagtgatatttttatactgtttgtctttttgttgtaggatgttatctt
caggatttaggttagttaaaaaatttattgattattatatttatttacat
ttctaatgttgtccccttcccagtttcctatcttaaacccctgcattcca
gactctttcccctttgcctctttgagggtccttcgccatccacccatcca
tttgtgtgtcactgatctaacactcccttatgctgggttttctagcctcc
caggatcaagagcttcccctcttactgatgccagataatgcaatcctctg
ctatacatgtaattggagctatgcatccctccatgtgtactctttgggtg
gtggtttagttttgggagctctggggtgcagttctgtattttacctatgg
agtgcattctttcagctcttcagtcttcccttagctctcattggggtccc
atgctcatccaatggttggctttatctgcctctgattggtcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_111260185_111261175
seq2: B6Ng01-120A08.b_46_1037

seq1  GAATTCATTTGTGACTTATCAGCTTCTTTATGGCATTTTTAATATCTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTGTGACTTATCAGCTTCTTTATGGCATTTTTAATATCTTTA  50

seq1  TTTCTCAGTGTGTAGATGGCTGGATTCAGGAGAGGTGTGATGACTGAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAGTGTGTAGATGGCTGGATTCAGGAGAGGTGTGATGACTGAGTA  100

seq1  AAATACAGCCAGAAACTTGTCAACCCAGGTGATGCTAACTGGCCACAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAGCCAGAAACTTGTCAACCCAGGTGATGCTAACTGGCCACAGAT  150

seq1  AGATGAAAATGATGGGCCCAAAGAACAGCAGAACCACTATGATATGGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAAAATGATGGGCCCAAAGAACAGCAGAACCACTATGATATGGGAT  200

seq1  GTGCATGTAGATAGGGCTTTTGATGAGCCATCTTTAGAGCGATGTTGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGTAGATAGGGCTTTTGATGAGCCATCTTTAGAGCGATGTTGAAC  250

seq1  AGTTAATAGAATGTAAGTATAAGATACAAGCAAGAGGATGAAACAAGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATAGAATGTAAGTATAAGATACAAGCAAGAGGATGAAACAAGTTG  300

seq1  TTGCTAAAATGCCACTGTCAGCATTTATTAGGATTTCCAGAGTATCAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAAAATGCCACTGTCAGCATTTATTAGGATTTCCAGAGTATCAGTA  350

seq1  TTCATGCAGGCTAATTTCATCACCAAAGGAATATCACAGAAAAAGCTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGCAGGCTAATTTCATCACCAAAGGAATATCACAGAAAAAGCTGTC  400

seq1  TATCACTCTAGGTCCACAGAAAGGTAGATCCAAAATCAAGAGCATCTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACTCTAGGTCCACAGAAAGGTAGATCCAAAATCAAGAGCATCTGAC  450

seq1  TAATGGCATGCACAAATCCAACAATCCATGGAATCACAAGGAACCAGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGCATGCACAAATCCAACAATCCATGGAATCACAAGGAACCAGATG  500

seq1  CACTTCTGTCTGTCCATGATGCTGCTGTAGTGGAGTGGCCTGCAGATGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTGTCTGTCCATGATGCTGCTGTAGTGGAGTGGCCTGCAGATGGC  550

seq1  CACATACCGGTCATAGGCCATTGTTACAAGAAGTACCATCTCACCTCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACCGGTCATAGGCCATTGTTACAAGAAGTACCATCTCACCTCCTG  600

seq1  CAAAGAAGTGCACACAGACGATCTGGCTCATACACCCTACAAAGGAAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAGTGCACACAGACGATCTGGCTCATACACCCTACAAAGGAAATG  650

seq1  GTTTTATTTTCTTTTAGGAGATCTATAGTCAGTTTGGGGGTGGTTACTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTTTCTTTTAGGAGATCTATAGTCAGTTTGGGGGTGGTTACTGA  700

seq1  GCAAAGGCAGAAGTCAATAAATGATAGATTAGCTAACAAGAAGTACATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGGCAGAAGTCAATAAATGATAGATTAGCTAACAAGAAGTACATGG  750

seq1  GAGAATGGAGATGATGATCAATGATGATCAATATCACAACAAACAGGTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGGAGATGATGATCAATGATGATCAATATCACAACAAACAGGTTG  800

seq1  CCTACCACAGCCATCAGGTAGAGGATGGAAAATGGCAGTAAGAGGAAGAT  850
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCTACCACAGCCATCATGTAGAGGATGGAAAATGGCAGTAAGAGGAAGAT  850

seq1  CTCAAGTTGCCTTGAGGAACACAGTCCCTGAAAAATAAACTCAGAAGCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGTTGCCTTGAGGAACACAGTCCCTGAAAAATAAACTCAGAAGCCA  900

seq1  CAGTATGATTAGAGTCTTCCATTAAATAAATAACACT-AAGGACCTGCAG  949
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CAGTATGATTAGAGTCTTCCATTAAATAAATAACACTAAAGGACCTGCAG  950

seq1  AAAGAGACAGATGTGTGTGTGTGTGTGTGTGTGTGTGTGAGA  991
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGACAGATGTGTGTGTGTGTGTGTGTGTGTGTGTGAGA  992

seq1: chr2_111459194_111460299
seq2: B6Ng01-120A08.g_68_1160 (reverse)

seq1  CTGACCAATACAGAGGCAGATAAAGCCAACCATTGGACTGAGCATGGGGA  50
      ||||||||| ||||||||||||||||||||||||||| ||||||| ||||
seq2  CTGACCAAT-CAGAGGCAGATAAAGCCAACCATTGGA-TGAGCAT-GGGA  47

seq1  CCCCAATGGAAGAGCTAGGGGAAGGACTGAAGGAGCTGAAAGGAATTGCA  100
      ||||||||  ||||||| ||||| ||||||| ||||||||||  | ||| 
seq2  CCCCAATG--AGAGCTAAGGGAA-GACTGAA-GAGCTGAAAG--AATGC-  90

seq1  ACTCCATAGGTAAAATAACAGAACTGCACCCCCAGAGCTCCCAAAGACTA  150
      |||||||||||||||| ||||||||||| |||||||||||||||| ||||
seq2  ACTCCATAGGTAAAAT-ACAGAACTGCA-CCCCAGAGCTCCCAAA-ACTA  137

seq1  AACCACCAACCAAAGAGTACACATGGAGGGATGCATAGCTCCAATTACAT  200
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCACCCAAAGAGTACACATGGAGGGATGCATAGCTCCAATTACAT  187

seq1  GTATAGCAGAGGATTGCATTATCTGGCATCAGTAAGAGGGGAAGCTCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGCAGAGGATTGCATTATCTGGCATCAGTAAGAGGGGAAGCTCTTG  237

seq1  ATCCTGGGAGGCTAGAAAACCCAGCATAAGGGAGTGTTAGATCAGTGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGGGAGGCTAGAAAACCCAGCATAAGGGAGTGTTAGATCAGTGACA  287

seq1  CACAAATGGATGGGTGGATGGCGAAGGACCCTCAAAGAGGCAAAGGGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATGGATGGGTGGATGGCGAAGGACCCTCAAAGAGGCAAAGGGGAA  337

seq1  AGAGTCTGGAATGCAGGGGTTTAAGATAGGAAACTGGGAAGGGGACAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTGGAATGCAGGGGTTTAAGATAGGAAACTGGGAAGGGGACAACA  387

seq1  TTAGAAATGTAAATAAATATAATAATCAATAAATTTTTTAACTAACCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATGTAAATAAATATAATAATCAATAAATTTTTTAACTAACCTAA  437

seq1  ATCCTGAAGATAACATCCTACAACAAAAAGACAAACAGTATAAAAATATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGAAGATAACATCCTACAACAAAAAGACAAACAGTATAAAAATATC  487

seq1  ACTTCTTAAATAATCACAATCACATTTTAAAAAGGTCCTGAATAAGAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTAAATAATCACAATCACATTTTAAAAAGGTCCTGAATAAGAACT  537

seq1  ATTTGGAAATATAAAGGTCACTAGAGCATTCATGAGCAAAACCAATAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAAATATAAAGGTCACTAGAGCATTCATGAGCAAAACCAATAACA  587

seq1  AAATATAAAAACAAACAAAAGTGCACACTGGATTATTATACATGAGCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAAAAACAAACAAAAGTGCACACTGGATTATTATACATGAGCTCA  637

seq1  AGTTATACGACAAAGCAATAATAATCAAAAGAGCACAGCAAAGTTATTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATACGACAAAGCAATAATAATCAAAAGAGCACAGCAAAGTTATTGT  687

seq1  TGTCTACCATTGACTAAATTAATATTATACACTAGAAGATTTTTACTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTACCATTGACTAAATTAATATTATACACTAGAAGATTTTTACTTAA  737

seq1  GTCAACAAATTTACAATGCCCTGGCTTTCAGCAAAGATGACAAAATAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACAAATTTACAATGCCCTGGCTTTCAGCAAAGATGACAAAATAATA  787

seq1  CATGAAACAGAAACAGAATCTTTAGCCAATGTTGGTAAATCTGGAGTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAACAGAAACAGAATCTTTAGCCAATGTTGGTAAATCTGGAGTTTA  837

seq1  AAAAAAAAAAAAGTCAACTCCAAATGAGTTAAATACACTAAATATAAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAGTCAACTCCAAATGAGTTAAATACACTAAATATAAAAT  887

seq1  CTGAAACTAATAAACTGCTTGAATGGTTTCTAATTTACTGAACTTTACAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACTAATAAACTGCTTGAATGGTTTCTAATTTACTGAACTTTACAG  937

seq1  CACTAGGTATAAATTCTCTCCTTTGGAAGAGGCATTAAAAAATAGTTGGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGGTATAAATTCTCTCCTTTGGAAGAGGCATTAAAAAATAGTTGGT  987

seq1  TCCCATTAGACTACAGCCAAATTTGTCTACAGTACTGGACACATCTTGCC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTAGACTACAGCCAAATTTGTCTACAGTACTGGACACATCTTGCC  1037

seq1  AGGTAGCTCTGTATTTTCCCATGCAATTTCCAGCATTGAGTAAGGCCATT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGCTCTGTATTTTCCCATGCAATTTCCAGCATTGAGTAAGGCCATT  1087

seq1  GAATTC  1106
      ||||||
seq2  GAATTC  1093