BAC Information

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BAC

Clone NameB6Ng01-120A16
Chromosome2 (Build37)
Map Location 111,204,396 - 111,205,591
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668799, Slc5a12, Muc15, LOC668802, LOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282
Downstream geneOlfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120A16.bB6Ng01-120A16.g
ACCDH924092DH924093
length1,1761,157
definitionDH924092|Mus musculus domesticus DNA, BAC clone: B6Ng01-120A16, 5' end.DH924093|Mus musculus domesticus DNA, BAC clone: B6Ng01-120A16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagtaatcttcaaagaagtaatattttaatgtaatgtgttatat
tgggtattagaaattactcttgtaaaaattaaccttttctatacattaac
ttggataattctatttttaactggaaaaaaataaaatattcccaattcaa
gatagagcaactcataatgggaagaagaaattgtcattttcactcaattc
ctattagcttaggctgggtaagaggaagaagtgattaaatggacatttca
tacattatgtttcctacgaggtataagttttgaagtgttttgaaaaaata
gtccatatgtttctttatattttggcaaattgtcattgtttaaattttac
aactttgtggcacattctaaatgtggcagacatctgtattttgctctgct
acttgtctatttctccaaatttcacattgtccattttgtattattccatc
acatattttccatatccactactttctaggaattttgctgttaattcatg
gattagtcatctggaaattgaaagtttgatgactctgggatatctttatt
ctcatgttattcgtagcttcaaatatttcaaaagatgtagattttgagag
aatgtatacatcatatgtgttttatctcattttccatatctaatagattc
ataagcttttcacatttatttcaattatgttactactagatctagtatct
ctcctttgccttaattttagaggcagttctgtaacttgccaattaataac
tggagttttattactgtctttcaaacaattgcttgaattagactcttgga
cttgacattaacttaatgcatagctcctcaaggctgtttgttttaatttt
ttgttttatgcttcacatattcagttaggaaattgaataattcatatctg
attcatattcagcaattcatttacttagttttgaaagagtatcttgtttt
tatcaaatattataaatatgctgagaatttcaaaagtttataggcacact
caagattagtaggaagtgactttgtgaccatgatctttaggagtatagtt
tacacacaacaacaaaaacagtaaggcaaaattacctaacaaggcattat
gagacaaaatgtctagaaatacaatatttagtttttatacccatttacta
cctgaatgtagtcatacttagttggt
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattattcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtatagttatct
ggtgtttggacctccttctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtcgccgcctgagaagctctgtggctcttgtccggaaggaggc
cggccgtctggagctgaggatggcgctgcctcagaagctctgtggctctt
gccgggaaggtggctggttgtctggagctgaagatggcgccgcccagaag
ctctgcgactcttgcccgtcccagaaacggctggcactctgtattccaca
tggtcacccgtgcagcctgccctccgcggagtcccggagccaagaaggct
cccgccggcgcctgtgccacaaacctctcagccgggcagacccccgtgct
ctcaccaggaaggtggccggctgtctggagctgaagatggtgccgcccag
aagctctgcgactctcgcccgttcccagaaacggctggcactctgtattc
cacacggtcacccgtggcagcctgccctccgcggagtcccggagccaaga
aggctcccgccggcgcctgtgccacaaacctctcaggcctggcagacccc
gtgctctcacaaggaagtggccggctgtctcagctttgcaattatgagga
cccatttgttcattcctgatcttagagcaaagccattgctgtttcattca
ggatttttcctggtaccctttcttcgaaagcctttcctatttcttctcta
tagtttcaggtgtctctggttttaggtggagattcctaaacacttagaat
tggacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_111204396_111205591
seq2: B6Ng01-120A16.b_44_1219 (reverse)

seq1  ACCAACTTAAGTATGGACCCTACATCCA-GTAGTACATGGTGTATAAAAA  49
      |||||| ||||||||    |||||| || |||||| |||| |||| ||||
seq2  ACCAAC-TAAGTATG---ACTACATTCAGGTAGTAAATGG-GTAT-AAAA  44

seq1  ATTAAATAATGGTATTTTTGTAGACATTTTGTCTCATAATGCTTTGTTTG  99
      | |||||| ||   | ||| |||||||||||||||||||||| ||| || 
seq2  ACTAAATATTG---TATTTCTAGACATTTTGTCTCATAATGCCTTG-TTA  90

seq1  GGTAATTTTTGCCTTACTGTTTTTGTTGTTGTTGTTGTAAACTATACTTC  149
      ||||| ||||||||||||||||||||||||||   |||||||||||| ||
seq2  GGTAA-TTTTGCCTTACTGTTTTTGTTGTTGT--GTGTAAACTATAC-TC  136

seq1  CTAAAGATCATGGTCACCAAAGTCACTTCCCTACTTAATCCTTGAGTGTG  199
      |||||||||||||||| ||||||||||| ||||| |||| ||||||||||
seq2  CTAAAGATCATGGTCA-CAAAGTCACTT-CCTAC-TAAT-CTTGAGTGTG  182

seq1  CCTATAAACTTTTGAAATTCTTCAGCATATTTTATAATATTTGATAAAAA  249
      |||||||||||||||||||| |||||||| ||||||||||||||||||||
seq2  CCTATAAACTTTTGAAATTC-TCAGCATA-TTTATAATATTTGATAAAAA  230

seq1  CAAGATACTCTTTCAAAACCTAAGTAAATGAATTGCTGAATATGAATCAG  299
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CAAGATACTCTTTCAAAA-CTAAGTAAATGAATTGCTGAATATGAATCAG  279

seq1  ATATGAATTATTCAATTTCCTAACTGAATATGTGAAGCATAAAACAAAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAATTATTCAATTTCCTAACTGAATATGTGAAGCATAAAACAAAAA  329

seq1  ATTAAAACAAACAGCCTTGAGGAGCTATGCATTAAGTTAATGTCAAGTCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAACAAACAGCCTTGAGGAGCTATGCATTAAGTTAATGTCAAGTCC  379

seq1  AAGAGTCTAATTCAAGCAATTGTTTGAAAGACAGTAATAAAACTCCAGTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTCTAATTCAAGCAATTGTTTGAAAGACAGTAATAAAACTCCAGTT  429

seq1  ATTAATTGGCAAGTTACAGAACTGCCTCTAAAATTAAGGCAAAGGAGAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTGGCAAGTTACAGAACTGCCTCTAAAATTAAGGCAAAGGAGAGA  479

seq1  TACTAGATCTAGTAGTAACATAATTGAAATAAATGTGAAAAGCTTATGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGATCTAGTAGTAACATAATTGAAATAAATGTGAAAAGCTTATGAA  529

seq1  TCTATTAGATATGGAAAATGAGATAAAACACATATGATGTATACATTCTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTAGATATGGAAAATGAGATAAAACACATATGATGTATACATTCTC  579

seq1  TCAAAATCTACATCTTTTGAAATATTTGAAGCTACGAATAACATGAGAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATCTACATCTTTTGAAATATTTGAAGCTACGAATAACATGAGAAT  629

seq1  AAAGATATCCCAGAGTCATCAAACTTTCAATTTCCAGATGACTAATCCAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATATCCCAGAGTCATCAAACTTTCAATTTCCAGATGACTAATCCAT  679

seq1  GAATTAACAGCAAAATTCCTAGAAAGTAGTGGATATGGAAAATATGTGAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAACAGCAAAATTCCTAGAAAGTAGTGGATATGGAAAATATGTGAT  729

seq1  GGAATAATACAAAATGGACAATGTGAAATTTGGAGAAATAGACAAGTAGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAATACAAAATGGACAATGTGAAATTTGGAGAAATAGACAAGTAGC  779

seq1  AGAGCAAAATACAGATGTCTGCCACATTTAGAATGTGCCACAAAGTTGTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAAATACAGATGTCTGCCACATTTAGAATGTGCCACAAAGTTGTA  829

seq1  AAATTTAAACAATGACAATTTGCCAAAATATAAAGAAACATATGGACTAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAAACAATGACAATTTGCCAAAATATAAAGAAACATATGGACTAT  879

seq1  TTTTTCAAAACACTTCAAAACTTATACCTCGTAGGAAACATAATGTATGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAAAACACTTCAAAACTTATACCTCGTAGGAAACATAATGTATGA  929

seq1  AATGTCCATTTAATCACTTCTTCCTCTTACCCAGCCTAAGCTAATAGGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCCATTTAATCACTTCTTCCTCTTACCCAGCCTAAGCTAATAGGAA  979

seq1  TTGAGTGAAAATGACAATTTCTTCTTCCCATTATGAGTTGCTCTATCTTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGAAAATGACAATTTCTTCTTCCCATTATGAGTTGCTCTATCTTG  1029

seq1  AATTGGGAATATTTTATTTTTTTCCAGTTAAAAATAGAATTATCCAAGTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGGAATATTTTATTTTTTTCCAGTTAAAAATAGAATTATCCAAGTT  1079

seq1  AATGTATAGAAAAGGTTAATTTTTACAAGAGTAATTTCTAATACCCAATA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATAGAAAAGGTTAATTTTTACAAGAGTAATTTCTAATACCCAATA  1129

seq1  TAACACATTACATTAAAATATTACTTCTTTGAAGATTACTTGAATTC  1196
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACATTACATTAAAATATTACTTCTTTGAAGATTACTTGAATTC  1176