BAC Information

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BAC

Clone NameB6Ng01-121B10
Chromosome2 (Build37)
Map Location 100,042,544 - 100,156,321
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC621386, LOC668702
Downstream geneLOC100042907, LOC241572, LOC668705
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121B10.bB6Ng01-121B10.g
ACCDH924861DH924862
length1,141820
definitionDH924861|Mus musculus domesticus DNA, BAC clone: B6Ng01-121B10, 5' end.DH924862|Mus musculus domesticus DNA, BAC clone: B6Ng01-121B10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,155,172 - 100,156,321)(100,042,544 - 100,043,360)
sequence
gaattcatgctcattgtactaggagcttaatttccactgtagaatcttac
tctacagacttcctttggatcaccatcattaccattgtcataatcatcat
gagaccatcttagtcattatggttggcgatggtaaaatgagtgctgggcc
atatgctgggaaatggacaatctacaagtaactattttcctgacgaaagt
atcttcctcctccaggaacaataagctgtcaatggttcttatgcaagtga
tggtgacttgggagctaattgatgctgaaatgtgtcatagcttgttatca
gtttttgcatctatttcacagtttctggggggtgatttgtggattagcca
tgtcatatatgaagcatagcattttacagctctcctccctgtcctctggt
tctcacattccttcagacccttctctcacatttctggtcctttggtggga
taaagttaactttgttcatttcttttttcttcttcttcctcttgtttctt
ttttccttacaaagtcctttgttatgtgaactcaagcaataccttttaga
aaggcaactctcaactgtttatgtatcctaagaaatagcaattacagtcc
aaaactataggtcttttaatttttttcacaatgctttctctcatgtggta
ttattacgtccagaaagaaatcaaaggagtctctcatacatagttttaca
gattaagtaggaaagcaaagcacatagtttaatttagaacactaaagtaa
actaatggcatttgaaaaaaatgataaaatttagagaagtttatatcaat
tatttatgtagaattaaagttatgacataaagttatatcatatttctgta
tcacacagaaataccctatgaaggaagatctttttaaatgtaatgtcatg
taacatgaaaaacttgcccttttacagattctactgatgagtgaccatgt
ggtaatataatttacacaagattatatacttacttatagttggaatctgt
cttcattattatctatgtttagatccataaaacctttagcccattctgaa
aacttgtgatctttgaagtgctctttcaagttccattagagctgattctt
tatgaaacctttctgtttgagcatttagaaagtattaagaa
gaattctcatgtttaccatttttgttgtttcttaacttaaaggtattgtt
taaataaaaattgctacagacaactattggggggattagagttgggcagg
tgtttatttacctggagagcagcagtaagggttgagtaataggtgagagg
aggaagggccatgagaggggaagtaccatgagcacatggccaggagaaac
agcaaggatttggagaccatcactgtggaggtagccaggctagcacttag
aaaaggaggttagaggttaccccgagtaagtatcaaagccaaataaatta
acaatctgactcttatttagttgtaagctagtcagggataagcttaaatt
ggttgaactctatgctagaaacaaaacttggttttctggaaggcagcaag
tgtacctctgagatgtctctctggcatgagttatacattttaaaggtaat
ttaagttcaccaaagcaaaagagtgacagagcaattaaagactcttatta
aattctagacgtgtggcttcatgaaattcagttgattttctgtgtctgtt
tcttcatcattgcaataaaacattattgttttctcttataaacttttgtg
catattaaatgaaatggtatataatagtgattaacaaaattgtcagaaac
cagtaaattaacactgagacaaccaatagatgtattcagagattatcagc
ttaacacatttagtactctttgttcatgagtgtgtatgattctatacaat
ttttaccacctataaatgtgtgtgaacacaatcacaatttttcattgcct
ttgtttagttttgagtgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_100155172_100156321
seq2: B6Ng01-121B10.b_47_1187 (reverse)

seq1  TTCTTAATTACTTTCCTAAATGCTCAAACAGAAGGTTTTCAT-AAGAATC  49
      ||||||| |||||| |||||||||||||||||| | |||||| |||||||
seq2  TTCTTAA-TACTTT-CTAAATGCTCAAACAGAAAGGTTTCATAAAGAATC  48

seq1  AGCTTCTTATGGGAACTTGAAAAGAGCACTTTCAAAGATCAACAAGTTTT  99
      ||| ||| || |||||||| ||||||||| |||||||||| ||||| |||
seq2  AGC-TCTAAT-GGAACTTG-AAAGAGCAC-TTCAAAGATC-ACAAG-TTT  92

seq1  TCAGAATTGGGCTAAAGGTTTTATGGATTCTAAACATAGATAATAATGAA  149
      |||||| |||||||||||||||||||| ||||||||||||||||||||||
seq2  TCAGAA-TGGGCTAAAGGTTTTATGGA-TCTAAACATAGATAATAATGAA  140

seq1  GACAGATTCCAACTATAAGTAAGTATATAATCTTGTGTAAATTATATTAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGATTCCAACTATAAGTAAGTATATAATCTTGTGTAAATTATATTAC  190

seq1  CACATGGTCACTCATCAGTAGAATCTGTAAAAGGGCAAGTTTTTCATGTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGTCACTCATCAGTAGAATCTGTAAAAGGGCAAGTTTTTCATGTT  240

seq1  ACATGACATTACATTTAAAAAGATCTTCCTTCATAGGGTATTTCTGTGTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGACATTACATTTAAAAAGATCTTCCTTCATAGGGTATTTCTGTGTG  290

seq1  ATACAGAAATATGATATAACTTTATGTCATAACTTTAATTCTACATAAAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAAATATGATATAACTTTATGTCATAACTTTAATTCTACATAAAT  340

seq1  AATTGATATAAACTTCTCTAAATTTTATCATTTTTTTCAAATGCCATTAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATATAAACTTCTCTAAATTTTATCATTTTTTTCAAATGCCATTAG  390

seq1  TTTACTTTAGTGTTCTAAATTAAACTATGTGCTTTGCTTTCCTACTTAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTTAGTGTTCTAAATTAAACTATGTGCTTTGCTTTCCTACTTAAT  440

seq1  CTGTAAAACTATGTATGAGAGACTCCTTTGATTTCTTTCTGGACGTAATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAAACTATGTATGAGAGACTCCTTTGATTTCTTTCTGGACGTAATA  490

seq1  ATACCACATGAGAGAAAGCATTGTGAAAAAAATTAAAAGACCTATAGTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCACATGAGAGAAAGCATTGTGAAAAAAATTAAAAGACCTATAGTTT  540

seq1  TGGACTGTAATTGCTATTTCTTAGGATACATAAACAGTTGAGAGTTGCCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGTAATTGCTATTTCTTAGGATACATAAACAGTTGAGAGTTGCCT  590

seq1  TTCTAAAAGGTATTGCTTGAGTTCACATAACAAAGGACTTTGTAAGGAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAAGGTATTGCTTGAGTTCACATAACAAAGGACTTTGTAAGGAAA  640

seq1  AAAGAAACAAGAGGAAGAAGAAGAAAAAAGAAATGAACAAAGTTAACTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACAAGAGGAAGAAGAAGAAAAAAGAAATGAACAAAGTTAACTTT  690

seq1  ATCCCACCAAAGGACCAGAAATGTGAGAGAAGGGTCTGAAGGAATGTGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCACCAAAGGACCAGAAATGTGAGAGAAGGGTCTGAAGGAATGTGAG  740

seq1  AACCAGAGGACAGGGAGGAGAGCTGTAAAATGCTATGCTTCATATATGAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGAGGACAGGGAGGAGAGCTGTAAAATGCTATGCTTCATATATGAC  790

seq1  ATGGCTAATCCACAAATCACCCCCCAGAAACTGTGAAATAGATGCAAAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTAATCCACAAATCACCCCCCAGAAACTGTGAAATAGATGCAAAAA  840

seq1  CTGATAACAAGCTATGACACATTTCAGCATCAATTAGCTCCCAAGTCACC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAACAAGCTATGACACATTTCAGCATCAATTAGCTCCCAAGTCACC  890

seq1  ATCACTTGCATAAGAACCATTGACAGCTTATTGTTCCTGGAGGAGGAAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTGCATAAGAACCATTGACAGCTTATTGTTCCTGGAGGAGGAAGA  940

seq1  TACTTTCGTCAGGAAAATAGTTACTTGTAGATTGTCCATTTCCCAGCATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCGTCAGGAAAATAGTTACTTGTAGATTGTCCATTTCCCAGCATA  990

seq1  TGGCCCAGCACTCATTTTACCATCGCCAACCATAATGACTAAGATGGTCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCAGCACTCATTTTACCATCGCCAACCATAATGACTAAGATGGTCT  1040

seq1  CATGATGATTATGACAATGGTAATGATGGTGATCCAAAGGAAGTCTGTAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGATTATGACAATGGTAATGATGGTGATCCAAAGGAAGTCTGTAG  1090

seq1  AGTAAGATTCTACAGTGGAAATTAAGCTCCTAGTACAATGAGCATGAATT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGATTCTACAGTGGAAATTAAGCTCCTAGTACAATGAGCATGAATT  1140

seq1  C  1150
      |
seq2  C  1141

seq1: chr2_100042544_100043360
seq2: B6Ng01-121B10.g_68_887

seq1  GAATTCTCATGTTTACCATTTTTGTTGTTTCTTAACTTAAAGGTATTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGTTTACCATTTTTGTTGTTTCTTAACTTAAAGGTATTGTT  50

seq1  TAAATAAAAATTGCTACAGACAACTATTGGGGGGATTAGAGTTGGGCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAAATTGCTACAGACAACTATTGGGGGGATTAGAGTTGGGCAGG  100

seq1  TGTTTATTTACCTGGAGAGCAGCAGTAAGGGTTGAGTAATAGGTGAGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTTACCTGGAGAGCAGCAGTAAGGGTTGAGTAATAGGTGAGAGG  150

seq1  AGGAAGGGCCATGAGAGGGGAAGTACCATGAGCACATGGCCAGGAGAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGGCCATGAGAGGGGAAGTACCATGAGCACATGGCCAGGAGAAAC  200

seq1  AGCAAGGATTTGGAGACCATCACTGTGGAGGTAGCCAGGCTAGCACTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGATTTGGAGACCATCACTGTGGAGGTAGCCAGGCTAGCACTTAG  250

seq1  AAAAGGAGGTTAGAGGTTACCCCGAGTAAGTATCAAAGCCAAATAAATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAGGTTAGAGGTTACCCCGAGTAAGTATCAAAGCCAAATAAATTA  300

seq1  ACAATCTGACTCTTATTTAGTTGTAAGCTAGTCAGGGATAAGCTTAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTGACTCTTATTTAGTTGTAAGCTAGTCAGGGATAAGCTTAAATT  350

seq1  GGTTGAACTCTATGCTAGAAACAAAACTTGGTTTTCTGGAAGGCAGCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAACTCTATGCTAGAAACAAAACTTGGTTTTCTGGAAGGCAGCAAG  400

seq1  TGTACCTCTGAGATGTCTCTCTGGCATGAGTTATACATTTTAAAGGTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCTCTGAGATGTCTCTCTGGCATGAGTTATACATTTTAAAGGTAAT  450

seq1  TTAAGTTCACCAAAGCAAAAGAGTGACAGAGCAATTAAAGACTCTTATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTCACCAAAGCAAAAGAGTGACAGAGCAATTAAAGACTCTTATTA  500

seq1  AATTCTAGACGTGTGGCTTCATGAAATTCAGTTGATTTTCTGTGTCTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTAGACGTGTGGCTTCATGAAATTCAGTTGATTTTCTGTGTCTGTT  550

seq1  TCTTCATCATTGCAATAAAACATTATTGTTTTCTCTTATAAACTTTTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATCATTGCAATAAAACATTATTGTTTTCTCTTATAAACTTTTGTG  600

seq1  CATATTAAATGAAATGGTATATAATAGTGATTAACAAAATTGTCAG-AAC  649
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CATATTAAATGAAATGGTATATAATAGTGATTAACAAAATTGTCAGAAAC  650

seq1  CAGTAAATTAACACTGAGACAACCAATAGATGTAATTCAGAGATTATCAG  699
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CAGTAAATTAACACTGAGACAACCAATAGATGT-ATTCAGAGATTATCAG  699

seq1  CTTAACACA-TTAGTACTCTTTGTTCATGAGTGTGTATGATTCTATACAA  748
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACACATTTAGTACTCTTTGTTCATGAGTGTGTATGATTCTATACAA  749

seq1  TTTTTACCACCTATAAATGTGTGTGAACACAATCACAATTTTTCATTGCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACCACCTATAAATGTGTGTGAACACAATCACAATTTTTCATTGCC  799

seq1  TT--GTTAGTTTTGAGTGATG  817
      ||   ||||||||||||||||
seq2  TTTGTTTAGTTTTGAGTGATG  820