BAC Information

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BAC

Clone NameB6Ng01-122L06
Chromosome2 (Build37)
Map Location 87,648,614 - 87,649,104
singlet/doubletsinglet
Overlap geneGA_x5J8B7W3Y5M-1094074-1093275
Upstream geneOlfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143
Downstream geneOlfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122L06.bB6Ng01-122L06.g
ACCDH926060DH926061
length1,168485
definitionDH926060|Mus musculus domesticus DNA, BAC clone: B6Ng01-122L06, 5' end.DH926061|Mus musculus domesticus DNA, BAC clone: B6Ng01-122L06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
gaattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atttatccagaagatgccccaactggtaagaaggacacatgctccactat
attcaaagcatccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacacgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggctggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacttttagcaagatttttattga
aaggacccagatgtagctatctcttgtgagactatgccggggcctagcaa
acaacagaagtggatgctcacagtcagctaatggatggatcacaggctgc
caatgaggagctagagaaagaaccctaggagcttaagggatctgcaatcc
tatagtgaacaacattatgactaaccagttccggagttttgactcttagc
tgattagtaacaaagatgtctaaatcggcattcattgtaagagaacccat
tgacactcaacttggtatgcctatacaggggaacgctgggcaaaagggga
ggtggggttgctatggaa
ttgggacagtaactgatatataacagatttccagagagaaaaaatttgtc
aggaaaaaaatacatgggtttctacaatgcatgatcaagcctagttatta
atatgatgaggcaattgccgatgaggataatcctgtaaatgatggagaac
agtgcagacagaatcccttgaaggttaggaagtgtgttaagtgtgataag
taattgtcttgtccagagaattgtaaatataataacaacacaataaatat
aatattgttcacaccaaatcactgatatgaaattctctttctgcacgaga
taatggaaatagtataattttatttagatcctcactcaaagccacttaaa
cattcacagacacaaatttcaaaatttttaccaggtgaggttctggagct
aataatcacctgctgtttccccttgggattagcctgaatcgggttaggct
tattcataattttttaagaatacattaagtcacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_87648614_87649104
seq2: B6Ng01-122L06.g_69_559

seq1  GAATTCTTGGGACAGTAACTGATATATAACAGATTTCCAGAGAGAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGGACAGTAACTGATATATAACAGATTTCCAGAGAGAAAAAA  50

seq1  TTTGTCAGGAAAAAAATACATGGGTTTCTACAATGCATGATCAAGCCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCAGGAAAAAAATACATGGGTTTCTACAATGCATGATCAAGCCTAG  100

seq1  TTATTAATATGATGAGGCAATTGCCGATGAGGATAATCCTGTAAATGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAATATGATGAGGCAATTGCCGATGAGGATAATCCTGTAAATGATG  150

seq1  GAGAACAGTGCAGACAGAATCCCTTGAAGGTTAGGAAGTGTGTTAAGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAGTGCAGACAGAATCCCTTGAAGGTTAGGAAGTGTGTTAAGTGT  200

seq1  GATAAGTAATTGTCTTGTCCAGAGAATTGTAAATATAATAACAACACAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGTAATTGTCTTGTCCAGAGAATTGTAAATATAATAACAACACAAT  250

seq1  AAATATAATATTGTTCACACCAAATCACTGATATGAAATTCTCTTTCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAATATTGTTCACACCAAATCACTGATATGAAATTCTCTTTCTGC  300

seq1  ACGAGATAATGGAAATAGTATAATTTTATTTAGATCCTCACTCAAAGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGATAATGGAAATAGTATAATTTTATTTAGATCCTCACTCAAAGCCA  350

seq1  CTTAAACATTCACAGACACAAATTTCAAAATTTTTACCAGGTGAGGTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAACATTCACAGACACAAATTTCAAAATTTTTACCAGGTGAGGTTCT  400

seq1  GGAGCTAATAATCACCTGCTGTTTCCCCTTGGGATTAGCCTGAATCGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTAATAATCACCTGCTGTTTCCCCTTGGGATTAGCCTGAATCGGGT  450

seq1  TAGGCTTATTCATAATTTTTTAAGAATACATTAAGTCACCT  491
      |||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTTATTCATAATTTTTTAAGAATACATTAAGTCACCT  491