BAC Information

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BAC

Clone NameB6Ng01-122P03
Chromosome2 (Build37)
Map Location 142,776,666 - 142,777,698
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122P03.bB6Ng01-122P03.g
ACCDH926244DH926245
length987409
definitionDH926244|Mus musculus domesticus DNA, BAC clone: B6Ng01-122P03, 5' end.DH926245|Mus musculus domesticus DNA, BAC clone: B6Ng01-122P03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccctgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagttttatcatac
agatctttcacttccttcgttagagtcacgccgagatatttatattattt
gtggctattgagaaggtgttgtttccctaatttcttt

aaaaggctcaacaagctgaggtgatcaagtgaggatgcctcagtcccact
tgggagagagaagaaagcaatcacaagtggggagggacggagggacttgg
gaggtaaagtggacaggatggggggcagtggggggtacaggggaacctga
tctggtattgggtgaggaaaaaggactgaagccctgaggtccagcagaaa
gaatgtaaacagtcaacctcaggaaataggaggttggagggacttccaga
atgcaccaaagacctgggagatgagagactcccaggactcaaagggagag
ggacctttgatgaaatgcctgacaatagggggagggaacttttagaaccc
acttactttatgaagatgaacatcaacacaaggatggggttgccatccca
taatcacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776666_142777698
seq2: B6Ng01-122P03.b_47_619 (reverse)

seq1  TGGTATAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGA  50
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGGTATAGAGACAGACAAGTGGACCAATGGAATAGAATTGAAGACCCAGA  50

seq1  AATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCCAAAA  100

seq1  CCATCCAGAGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAAC  150
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAAC  150

seq1  TGGTTGTTATCATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTG  200
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTG  200

seq1  TACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGA  250

seq1  CACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGC  300

seq1  ACAGGGGACAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATC  350
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATC  350

seq1  GAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAA  400

seq1  AAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATC  450
      ||||||| ||| ||||||||||||||||||||||||| ||||||||||||
seq2  AAGACACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATC  450

seq1  TTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGA  500

seq1  ACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGG  550
      |||||||||||||||| |||||||||||||||||||| ||||||||||||
seq2  ACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCCTTAAAAAATGGG  550

seq1  GCTCACAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTG  600
      ||||| ||            ||| |||||    |||              
seq2  GCTCAGAA----------CTGAACAAAGA----ATTC-------------  573

seq1  CTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACT  650
                                                        
seq2  --------------------------------------------------  573

seq1  TATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATA  700
                                                        
seq2  --------------------------------------------------  573

seq1  AAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGA  750
                                                        
seq2  --------------------------------------------------  573

seq1  AGATATGGGCACAGGGGAAAAATTCCTGAACAGAAGAGCAATGGCTTGTG  800
                                                        
seq2  --------------------------------------------------  573

seq1  CTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTC  850
                                                        
seq2  --------------------------------------------------  573

seq1  TGCAAGGCAAAAGACACTGTCTATAAGACAAAAAGACCACCAACAGACTG  900
                                                        
seq2  --------------------------------------------------  573

seq1  GGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACA  950
                                                        
seq2  --------------------------------------------------  573

seq1  TATATAAAGAACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCATT  1000
                                                        
seq2  --------------------------------------------------  573

seq1  AAAAAATGGGGCTCAGAACTGAACAAAGAATTC  1033
                                       
seq2  ---------------------------------  573


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