BAC Information

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BAC

Clone NameB6Ng01-123A20
Chromosome2 (Build37)
Map Location 94,924,230 - 94,925,347
singlet/doubletsinglet
Overlap genenone
Upstream geneHsd17b12, E530001K10Rik, Ttc17, Itpa-ps1, Api5, LOC100043259
Downstream geneLOC100042843
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123A20.bB6Ng01-123A20.g
ACCDH926323DH926324
length1,0991,177
definitionDH926323|Mus musculus domesticus DNA, BAC clone: B6Ng01-123A20, 5' end.DH926324|Mus musculus domesticus DNA, BAC clone: B6Ng01-123A20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccataaagtatggtcagtccttaaactgtgcatatgctcctttga
atgggatctactcatcatcttaaactgatttatctcataattccatacag
attttgcccacagcacttgcctgtattatacatggaagacatgttgttag
gaaatatccaagtctttgagtagttttggttcattttattaatttagcag
aggtcaatacatttcttttttttttttttttgtacctggtgcatgtcagg
ctattatccacatgggcagacaatgtcaggctgtttttaggtagtcgttt
gcaaaatgcttaatgcatagtaggatctgcaattagttgctgattgcttt
ctgagactggatgttttctcactgaaaggctcttgacttagtttttgaac
tggttccttttaagatgtcactttctttgaactctttattgaaggtttat
gtaattttcccttctcccgaatctgacttgttttttttttttttttattt
ctttttgctgctgaatagatttgtccagagagaaagaaagaggacagccc
ctgtagataagaaagcacctgggtagagtttacatgacatatttaaaggt
ttgctctgttatctgggaagggcaggatcaaagagcagaagatgaagtta
tttttgctgagaattttatcctgcttcattgtttatgatacgcctcattt
tagcagaaagcatagctgaggaatatcagtggtttagactgcttgctagt
ctctgtattaactatttataaattgaattattttgaggttaggatggatg
gaagaggttagaactacaaggcaaaaatgatgcacttatgtgtcacccat
caactctcaagtccctgttttaattcattgactgaaatggaaacagtcaa
ttccatgtctaatgatgcatcgttttattgtatgatggtaaagtatttga
caggcagtcaaaacatatttttagggatgcagatgatcagtggggtgaaa
gcagattgctatgttgcataagtcccagtgactggagaattattcagagc
cccattgaaagagaattgacttttgaaagtacattggattcctgttcac
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatctttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcttggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatatattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaacgctgacaccattgcatacactagcaagattttattgaaag
gacccagatgtagctgtctcttgtgagacttatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggagagctaagaaagtagccaaggagctaaggggatctgcaaccctat
aggtggaccacattatgactaaccagtacccgagctcctgactctctagc
ctgcatatgtattcaagatggctagtcgccatccactgtgacaagagccc
attgactgcaaccttatatgcccagtacagtgacctaggcctaaggtgga
gatggtgtgtcacggggaattgctgcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_94924230_94925347
seq2: B6Ng01-123A20.b_46_1144

seq1  GAATTCCATAAAGTATGGTCAGTCCTTAAACTGTGCATATGCTCCTTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAAAGTATGGTCAGTCCTTAAACTGTGCATATGCTCCTTTGA  50

seq1  ATGGGATCTACTCATCATCTTAAACTGATTTATCTCATAATTCCATACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATCTACTCATCATCTTAAACTGATTTATCTCATAATTCCATACAG  100

seq1  ATTTTGCCCACAGCACTTGCCTGTATTATACATGGAAGACATGTTGTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCCCACAGCACTTGCCTGTATTATACATGGAAGACATGTTGTTAG  150

seq1  GAAATATCCAAGTCTTTGAGTAGTTTTGGTTCATTTTATTAATTTAGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATCCAAGTCTTTGAGTAGTTTTGGTTCATTTTATTAATTTAGCAG  200

seq1  AGGTCAATACATTTCTTTTTTTTTTTTTTTTGTACCTGGTGCATGTCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAATACATTTCTTTTTTTTTTTTTTTTGTACCTGGTGCATGTCAGG  250

seq1  CTATTATCCACATGGGCAGACAATGTCAGGCTGTTTTTAGGTAGTCGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATCCACATGGGCAGACAATGTCAGGCTGTTTTTAGGTAGTCGTTT  300

seq1  GCAAAATGCTTAATGCATAGTAGGATCTGCAATTAGTTGCTGATTGCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATGCTTAATGCATAGTAGGATCTGCAATTAGTTGCTGATTGCTTT  350

seq1  CTGAGACTGGATGTTTTCTCACTGAAAGGCTCTTGACTTAGTTTTTGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACTGGATGTTTTCTCACTGAAAGGCTCTTGACTTAGTTTTTGAAC  400

seq1  TGGTTCCTTTTAAGATGTCACTTTCTTTGAACTCTTTATTGAAGGTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCTTTTAAGATGTCACTTTCTTTGAACTCTTTATTGAAGGTTTAT  450

seq1  GTAATTTTCCCTTCTCCCGAATCTGACTTGTTTTTTTTTTTTTTTTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTTCCCTTCTCCCGAATCTGACTTGTTTTTTTTTTTTTTTTATTT  500

seq1  CTTTTTGCTGCTGAATAGATTTGTCCAGAGAGAAAGAAAGAGGACAGCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGCTGCTGAATAGATTTGTCCAGAGAGAAAGAAAGAGGACAGCCC  550

seq1  TTGTAGATAAGAAAGCACCTGGGTAGAGTTTACATGACATATTTAAAGGT  600
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGATAAGAAAGCACCTGGGTAGAGTTTACATGACATATTTAAAGGT  600

seq1  TTGCTCTGTTATCTGGGAAGGGCAGGATCAAAGAGCAGAAGATGAAGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTGTTATCTGGGAAGGGCAGGATCAAAGAGCAGAAGATGAAGTTA  650

seq1  TTTTTGCTGAGAATTTTATCCTGCTTCATTGTTTATGATACGCCTCATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGCTGAGAATTTTATCCTGCTTCATTGTTTATGATACGCCTCATTT  700

seq1  TAGCAGAAAGCATAGCTGAGGAATATCAGTGGTTTAGACTGCTTGCTAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGAAAGCATAGCTGAGGAATATCAGTGGTTTAGACTGCTTGCTAGT  750

seq1  CTCTGTATTAACTATTTATAAATTGAATTATTTTGAGGTTAGGATGGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTATTAACTATTTATAAATTGAATTATTTTGAGGTTAGGATGGATG  800

seq1  GAAGAGGTTAGAACTACAAGGCAAAAATGATGCACTTATGTGTCACCCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGTTAGAACTACAAGGCAAAAATGATGCACTTATGTGTCACCCAT  850

seq1  CAACTCTCAAGTCCCTGTTTTAATTCATTGACTGAAATGGAAACAGTCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTCAAGTCCCTGTTTTAATTCATTGACTGAAATGGAAACAGTCAA  900

seq1  TTCCATGTCTAATGATGCATCGTTTTATTGTATGATGGGTAAAGTATTTG  950
      |||||||||||||||||||||||||||||||||||| |||||||||||| 
seq2  TTCCATGTCTAATGATGCATCGTTTTATTGTATGAT-GGTAAAGTATTT-  948

seq1  GACAGGCAGTCAAAAACATATATTTAGGGGGATGGCAGGATGAATCAGT-  999
      ||||||||||| ||||||||| ||||  ||||| ||| |||| |||||| 
seq2  GACAGGCAGTC-AAAACATATTTTTA--GGGAT-GCA-GATG-ATCAGTG  992

seq1  GGGTGAAAGCAGA-TGCTATGTTGCAATACAGTCCCAGTGACCTGAGATT  1048
      ||||||||||||| ||||||||||| ||| ||||||||||||  |||| |
seq2  GGGTGAAAGCAGATTGCTATGTTGC-ATA-AGTCCCAGTGACTGGAGAAT  1040

seq1  TATTCCAAGAGCCCACCATGGAAGAAGAGAATTGACTTTTGAAAGTTACC  1098
      |||||  ||||||  |||| ||  ||||||||||||||||||||||   |
seq2  TATTC--AGAGCC--CCATTGA--AAGAGAATTGACTTTTGAAAGT--AC  1082

seq1  ATTGACATTCCCCTGTTCAC  1118
      ||||  |||  |||||||||
seq2  ATTG-GATT--CCTGTTCAC  1099