BAC Information

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BAC

Clone NameB6Ng01-123J13
Chromosome2 (Build37)
Map Location 59,219,316 - 59,346,771
singlet/doubletdoublet
Overlap geneLOC625354, 2310032F03Rik
Upstream geneAcvr1, LOC674940, Upp2, BC062650, Pkp4
Downstream geneLOC100038999, LOC100039016, Tanc1, Wdsub1, Baz2b, LOC667103, LOC667106, Ldha-ps, LOC100039092, March7, Cd302, LOC625861, Ly75, LOC100039176, Pla2r1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123J13.bB6Ng01-123J13.g
ACCDH926718DH926719
length1,05888
definitionDH926718|Mus musculus domesticus DNA, BAC clone: B6Ng01-123J13, 5' end.DH926719|Mus musculus domesticus DNA, BAC clone: B6Ng01-123J13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,219,316 - 59,220,372)(59,346,684 - 59,346,771)
sequence
gaattccagattattatgttaagggaaataaactaggcccagaaagacag
aaaccatatggaagcaataataataataataataataataatagtaatgt
gtctcatatcataaaagttaaaagtcccatggtggttactaagggctggg
gtacagtgagtgggggactggggagagattcatcagtgggtactaagtta
caggaaggcgagaacaggaggttcggtgtgctaccgaaagttggcgacta
tggacaacgtactgtgctttaaaacacaccagagaggcggttgcttaagg
agtcacagtcatgtggctggagtaacacagaaaagggaaatctggtcttt
tgcttcttgtctgtttcttttggaaaacaagacaaaaaacaaacaaacaa
acaaaaaaatcaaacccttgctttctctggacattctgggctttctctct
cttttttcataaagttatttcctgatttttctgccacatggcttctcctc
ctctacctcccctttcccccttcccccttctgagtcgctgcctggattta
cagttgcacacttgtggttactcttttgaactctaataaaattagagcaa
acaaacaactgtaaggatcttgaaaactctcaccataaagaatgataaat
gcgtgagaaagggatgtttaacctaacttaaacatttaagtaaatatacc
aaaacagtacatagtattccattaacatatatattatttttatgctttat
gcatcaatttttttttccgagacagggtttctctgtgtagccctggctgt
cctggaactcactctgtagaccaggctggctttcaaacccagaaatccgc
ctgcctctgcctcccaagtgctgggattaaaggcgtgtgccaccaccgcc
cagctatgcatcaatttaaaatacaattttaaagtgatattaaaggcaat
gaatgagatatatttttggaagagttttcaaacactaatgcttccaatat
catttaattaattaaacagcaatagtttttctcaccacatgacttcattt
acaaattg
ccagccttcttgaggacattttgagcttccactgcacatgtgatggatgt
gtgtgtatgtgtatgtgtgtgttagatgtgtgtatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_59219316_59220372
seq2: B6Ng01-123J13.b_48_1105

seq1  GAATTCCAGATTATTATGTTAAGGGAAATAAACTAGGCCCAGAAAGACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATTATTATGTTAAGGGAAATAAACTAGGCCCAGAAAGACAG  50

seq1  AAACCATATGGAAGCAATAATAATAATAATAATAATAATAATAGTAATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATATGGAAGCAATAATAATAATAATAATAATAATAATAGTAATGT  100

seq1  GTCTCATATCATAAAAGTTAAAAGTCCCATGGTGGTTACTAAGGGCTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCATATCATAAAAGTTAAAAGTCCCATGGTGGTTACTAAGGGCTGGG  150

seq1  GTACAGTGAGTGGGGGACTGGGGAGAGATTCATCAGTGGGTACTAAGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGTGAGTGGGGGACTGGGGAGAGATTCATCAGTGGGTACTAAGTTA  200

seq1  CAGGAAGGCGAGAACAGGAGGTTCGGTGTGCTACCGAAAGTTGGCGACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGGCGAGAACAGGAGGTTCGGTGTGCTACCGAAAGTTGGCGACTA  250

seq1  TGGACAACGTACTGTGCTTTAAAACACACCAGAGAGGCGGTTGCTTAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAACGTACTGTGCTTTAAAACACACCAGAGAGGCGGTTGCTTAAGG  300

seq1  AGTCACAGTCATGTGGCTGGAGTAACACAGAAAAGGGAAATCTGGTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACAGTCATGTGGCTGGAGTAACACAGAAAAGGGAAATCTGGTCTTT  350

seq1  TGCTTCTTGTCTGTTTCTTTTGGAAAACAAGACAAAAAACAAACAAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTTGTCTGTTTCTTTTGGAAAACAAGACAAAAAACAAACAAACAA  400

seq1  ACAAAAAAATCAAACCCTTGCTTTCTCTGGACATTCTGGGCTTTCTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAAATCAAACCCTTGCTTTCTCTGGACATTCTGGGCTTTCTCTCT  450

seq1  CTTTTTTCATAAAGTTATTTCCTGATTTTTCTGCCACATGGCTTCTCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTCATAAAGTTATTTCCTGATTTTTCTGCCACATGGCTTCTCCTC  500

seq1  CTCTACCTCCCCTTTCCCCCTTCCCCCTTCTGAGTCGCTGCCTGGATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACCTCCCCTTTCCCCCTTCCCCCTTCTGAGTCGCTGCCTGGATTTA  550

seq1  CAGTTGCACACTTGTGGTTACTCTTTTGAACTCTAATAAAATTAGAGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGCACACTTGTGGTTACTCTTTTGAACTCTAATAAAATTAGAGCAA  600

seq1  ACAAACAACTGTAAGGATCTTGAAAACTCTCACCATAAAGAATGATAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAACTGTAAGGATCTTGAAAACTCTCACCATAAAGAATGATAAAT  650

seq1  GCGTGAGAAAGGGATGTTTAACCTAACTTAAACATTTAAGTAAATATACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGAGAAAGGGATGTTTAACCTAACTTAAACATTTAAGTAAATATACC  700

seq1  AAAACAGTACATAGTATTCCATTAACATATATATTATTTTTATGCTTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGTACATAGTATTCCATTAACATATATATTATTTTTATGCTTTAT  750

seq1  GCATCAATTTTTTTTTCCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAATTTTTTTTTCCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGT  800

seq1  CCTGGAACTCACTCTGTAGACCAGGCTGGC-TTCAAACCCAGAAATCCGC  849
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCTGGAACTCACTCTGTAGACCAGGCTGGCTTTCAAACCCAGAAATCCGC  850

seq1  CTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGTGCCACCACCGCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGTGCCACCACCGCC  900

seq1  CAGCTATGCATCAATTTAAAATACAATTTTAAAGTGATATTAAAGGCAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTATGCATCAATTTAAAATACAATTTTAAAGTGATATTAAAGGCAAT  950

seq1  GAATGAGATATATTTTTGGAAGAGTTTTCAAACACTAATGCTTCCAATAA  999
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GAATGAGATATATTTTTGGAAGAGTTTTCAAACACTAATGCTTCCAAT-A  999

seq1  TCAATTAATTAATTAAACAGCAATAG-TTTTCTCAACACATGACCTCATT  1048
      ||| |||||||||||||||||||||| |||||||| |||||||| |||||
seq2  TCATTTAATTAATTAAACAGCAATAGTTTTTCTCACCACATGACTTCATT  1049

seq1  TACAAATTG  1057
      |||||||||
seq2  TACAAATTG  1058

seq1: chr2_59346684_59346771
seq2: B6Ng01-123J13.g_73_160 (reverse)

seq1  CACATACACACATCTAACACACACATACACATACACACACATCCATCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACACACATCTAACACACACATACACATACACACACATCCATCACA  50

seq1  TGTGCAGTGGAAGCTCAAAATGTCCTCAAGAAGGCTGG  88
      ||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGTGGAAGCTCAAAATGTCCTCAAGAAGGCTGG  88