BAC Information

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BAC

Clone NameB6Ng01-123O07
Chromosome2 (Build37)
Map Location 133,819,185 - 133,908,370
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043785, A430048G15Rik, Bmp2
Downstream geneHao1, Txndc13, LOC627897, LOC433478, Plcb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123O07.bB6Ng01-123O07.g
ACCDH926940DH926941
length1,1401,081
definitionDH926940|Mus musculus domesticus DNA, BAC clone: B6Ng01-123O07, 5' end.DH926941|Mus musculus domesticus DNA, BAC clone: B6Ng01-123O07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(133,819,185 - 133,820,341)(133,907,282 - 133,908,370)
sequence
gaattccttcccaacggatactctgggtagagatgtctacaggagtgaca
gccgctgtgtctcgatgttcatcaaaacaaagcaaagattctgagaggaa
actggagtaaagtcctgttcatgtgggtcaccagcaagaaaaaccactaa
ctgcaaagactgtggtggcttgcttctgtcattgggaggcttagtcattg
ggaggacacaggaaaggcagtgttgggtggctgctttagggctggagtca
ggctattcgcatgtttgaaacagtttgttcctgaaaactagaagcagaca
ttgaatttctctgaaacagaacagatacaatcagttcagcatgtgtttaa
aactatactaggtacacatttgtgaatatctacttatgtctttcggcccc
cacctccctttaacttatgactcctcaaggctatagaacattgaaattgg
gctttcaattgatgtggttaaagagaaagaaaaccccagccttaattata
ttaaaatctagtcagactttgttttaactagtcccttcttcaacttttgt
aagccagatgtttctctaataactctcatgaaactgtgtatcatatacag
gtcttatattttgtgacaaaatgtcttttgcttttattctttttggctag
agataataacctatgagcaacgtcaaggcaaaagaatgagaagttacttc
tgttttgatgcttttcccctaaatgagctaagcaaacaaggatatgacag
agagcacatctcatctgggccaacttggtagcaggccacctcagtgctat
tgatttttgcatttccagctggtgtccctgtgtcatttgaaatgaaggta
ccgtgcatagtctttacaaactccctactgcttgctgaggtggataaaaa
gatgcaaactcatagaaatatgccaaagaatataatagtctctacagaga
tctggctgaatcaaccaacaaaagttccagctgtggacgccgcgcggaac
aagggactcttgctgatgtgcagcgcatgcttctgacgttcagttcagaa
gagtaagaagctatttccaaagccctggacagatgtgtctgacagagtct
aatgtgtttgtataaactactatccaacatggcttgctct
gaattcaagattctagatccttacctgttgtataccaggagtagacccat
tgtaccaatcaaactgttctccaaatccttctaatttcttttactatttt
ttctttaattttataggtattttgtcagaatttatgtctacatgcattcc
ttgtgtccaccaaggccaaaagagggtgtgagattccctggaactgtagt
tgcagaatattctgagccaccatgctggttctgagaattgaaccagagac
ctttgaaagagcagccagtgattttaaccactgagccacctctctagtcc
cactttaggttcaaagggcatcctacagctagaatatccaacccagtgcc
ttaaagagagttaggaaattgtattatgttttattttgtttttaattgag
aagaaatattctgaatagacattggttatttacaattttctttcttagat
atggaatttttaatttttttctttaaaaataaaatgttcattgacagtta
tgccccaccaacacacacacacacacacacacacacacacacacacacac
acactttgctctgtgttgcttacttttacttaaaatatatttggtcacct
tccttgttcatttacatcatgattttaacttgcctgtaaattgtgtgaaa
gtgaggagtggccttgagctcatattcagctggagtgggaaaatttcata
aatccagatgcacccagctgtggtatacctggatgccctggcttgccttc
aacttttctggttcacaccagtggctctggggtaattatctttaaagtgt
ctctaaatgattatgttcattctcgaagtgtctctatttgggtgataaag
tatcaagttaccgcagttatactccactaataaaaccacgtgctgctgag
cttctgattttcttctttcaatacacaagaaaatatttccaactacaaac
accatggcaggattctgtgaaaggaaatggggtaatcatctttggtgatc
ttagtattaaaaaagtgatagaagagcagaaatgtagctgattttttcac
ctgctaaccatctcagatgtgaaatgaatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_133819185_133820341
seq2: B6Ng01-123O07.b_48_1187

seq1  GAATTCCTTCCCAACGGATACTCTGGGTAGAGATGTCTACAGGAGTGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCCCAACGGATACTCTGGGTAGAGATGTCTACAGGAGTGACA  50

seq1  GCCGCTGTGTCTCGATGTTCATCAAAACAAAGCAAAGATTCTGAGAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCTGTGTCTCGATGTTCATCAAAACAAAGCAAAGATTCTGAGAGGAA  100

seq1  ACTGGAGTAAAGTCCTGTTCATGTGGGTCACCAGCAAGAAAAACCACTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGTAAAGTCCTGTTCATGTGGGTCACCAGCAAGAAAAACCACTAA  150

seq1  CTGCAAAGACTGTGGTGGCTTGCTTCTGTCATTGGGAGGCTTAGTCATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAAGACTGTGGTGGCTTGCTTCTGTCATTGGGAGGCTTAGTCATTG  200

seq1  GGAGGACACAGGAAAGGCAGTGTTGGGTGGCTGCTTTAGGGCTGGAGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGACACAGGAAAGGCAGTGTTGGGTGGCTGCTTTAGGGCTGGAGTCA  250

seq1  GGCTATTCGCATGTTTGAAACAGTTTGTTCCTGAAAACTAGAAGCAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATTCGCATGTTTGAAACAGTTTGTTCCTGAAAACTAGAAGCAGACA  300

seq1  TTGAATTTCTCTGAAACAGAACAGATACAATCAGTTCAGCATGTGTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTTCTCTGAAACAGAACAGATACAATCAGTTCAGCATGTGTTTAA  350

seq1  AACTATACTAGGTACACATTTGTGAATATCTACTTATGTCTTTCGGCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATACTAGGTACACATTTGTGAATATCTACTTATGTCTTTCGGCCCC  400

seq1  CACCTCCCTTTAACTTATGACTCCTCAAGGCTATAGAACATTGAAATTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCCTTTAACTTATGACTCCTCAAGGCTATAGAACATTGAAATTGG  450

seq1  GCTTTCAATTGATGTGGTTAAAGAGAAAGAAAACCCCAGCCTTAATTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCAATTGATGTGGTTAAAGAGAAAGAAAACCCCAGCCTTAATTATA  500

seq1  TTAAAATCTAGTCAGACTTTGTTTTAACTAGTCCCTTCTTCAACTTTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATCTAGTCAGACTTTGTTTTAACTAGTCCCTTCTTCAACTTTTGT  550

seq1  AAGCCAGATGTTTCTCTAATAACTCTCATGAAACTGTGTATCATATACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGATGTTTCTCTAATAACTCTCATGAAACTGTGTATCATATACAG  600

seq1  GTCTTATATTTTGTGACAAAATGTCTTTTGCTTTTATTCTTTTTGGCTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTATATTTTGTGACAAAATGTCTTTTGCTTTTATTCTTTTTGGCTAG  650

seq1  AGATAATAACCTATGAGCAACGTCAAGGCAAAAGAATGAGAAGTTACTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATAACCTATGAGCAACGTCAAGGCAAAAGAATGAGAAGTTACTTC  700

seq1  TGTTTTGATGCTTTTCCCCTAAATGAGCTAAGCAAACAAGGATATGACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGATGCTTTTCCCCTAAATGAGCTAAGCAAACAAGGATATGACAG  750

seq1  AGAGCACATCTCATCTGGGCCAACTTGGTAGCAGGCCACCTCAGTGCTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCACATCTCATCTGGGCCAACTTGGTAGCAGGCCACCTCAGTGCTAT  800

seq1  TGATTTTTGCATTTCCAGCTGGTGTCCCTGTGTCATTTGAAATGAAGGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTGCATTTCCAGCTGGTGTCCCTGTGTCATTTGAAATGAAGGTA  850

seq1  CCGTGCATAGTCTTTACAAACTCCCTACTGCTTGCTGAGGTGGATAAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGCATAGTCTTTACAAACTCCCTACTGCTTGCTGAGGTGGATAAAAA  900

seq1  GATGCAAACTCATAGAAATATGCCAAAGAATATAATAGTCTCTACAGAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GATGCAAACTCATAGAAATATGCCAAAGAATATAATAGTCTCTACAG-AG  949

seq1  ATCTGGCTGAATCAACCAACAAAAGGTTCCAGCTGTGGACGCCGCGCGGA  1000
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATCTGGCTGAATCAACCAACAAAA-GTTCCAGCTGTGGACGCCGCGCGGA  998

seq1  ACAAAGGGAACTCTTGGCTGAGTGTGCAGCGCATGCTTCTGACGTTCCAG  1050
      ||||  || |||||| ||||| |||||||||||||||||||||||| |||
seq2  ACAA--GGGACTCTT-GCTGA-TGTGCAGCGCATGCTTCTGACGTT-CAG  1043

seq1  TTCAGGGAAGGAGTAAAGAAAGCTA-TTCCAAAGCCCTTGACCAGATGTG  1099
      |||||   | ||||||   |||||| |||||||||||| || ||||||||
seq2  TTCAG---AAGAGTAA--GAAGCTATTTCCAAAGCCCTGGA-CAGATGTG  1087

seq1  TCTGACAGAGTCTAAAATGTGTTTGTATAAAACCTTCCCTAT-CAACATG  1148
      |||||||||||||  ||||||||||||||||  ||   |||| |||||||
seq2  TCTGACAGAGTCT--AATGTGTTTGTATAAA--CT--ACTATCCAACATG  1131

seq1  GCTTGCTCT  1157
      |||||||||
seq2  GCTTGCTCT  1140

seq1: chr2_133907282_133908370
seq2: B6Ng01-123O07.g_68_1148 (reverse)

seq1  GGATTCATTTCACATCTTGAGATGGTTAGCA-GTGAAAATATTCAGCTTA  49
      |||||||||||||||| |||||||||||||| ||||||| | ||||||  
seq2  GGATTCATTTCACATC-TGAGATGGTTAGCAGGTGAAAA-AATCAGCT--  46

seq1  CACTCTACTGCTCTTCTATCACTTTTTTAATACCTAAGATCACCAAGGAT  99
       ||  | ||||||||||||||||||||||||| ||||||||||||| |||
seq2  -ACATTTCTGCTCTTCTATCACTTTTTTAATA-CTAAGATCACCAAAGAT  94

seq1  GATTTACCCCCATTTCCTTTCACAGAATCCTGCCATGGTGTTTGTAGTTG  149
      ||||   |||||||||||||||||||||||||||||||||||||||||||
seq2  GATT--ACCCCATTTCCTTTCACAGAATCCTGCCATGGTGTTTGTAGTTG  142

seq1  GAAATATTTTCTTGTGTTATTGAAAGAAGAAAATCAGAAGCTCAGCAGCA  199
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAAATATTTTCTTGTG-TATTGAAAGAAGAAAATCAGAAGCTCAGCAGCA  191

seq1  CGTGGTTTTATTAGTGGAGTATAACTGCGGTAACTTGATACTTTATCACC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGTTTTATTAGTGGAGTATAACTGCGGTAACTTGATACTTTATCACC  241

seq1  CAAATAGAGACACTTCGAGAATGAACATAATCATTTAGAGACACTTTAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAGAGACACTTCGAGAATGAACATAATCATTTAGAGACACTTTAAA  291

seq1  GATAATTACCCCAGAGCCACTGGTGTGAACCAGAAAAGTTGAAGGCAAGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTACCCCAGAGCCACTGGTGTGAACCAGAAAAGTTGAAGGCAAGC  341

seq1  CAGGGCATCCAGGTATACCACAGCTGGGTGCATCTGGATTTATGAAATTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCATCCAGGTATACCACAGCTGGGTGCATCTGGATTTATGAAATTT  391

seq1  TCCCACTCCAGCTGAATATGAGCTCAAGGCCACTCCTCACTTTCACACAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTCCAGCTGAATATGAGCTCAAGGCCACTCCTCACTTTCACACAA  441

seq1  TTTACAGGCAAGTTAAAATCATGATGTAAATGAACAAGGAAGGTGACCAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGGCAAGTTAAAATCATGATGTAAATGAACAAGGAAGGTGACCAA  491

seq1  ATATATTTTAAGTAAAAGTAAGCAACACAGAGCAAAGTGTGTGTGTGTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTTAAGTAAAAGTAAGCAACACAGAGCAAAGTGTGTGTGTGTGT  541

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGTGGGGCATAACTGTCAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGTGGGGCATAACTGTCAA  591

seq1  TGAACATTTTATTTTTAAAGAAAAAAATTAAAAATTCCATATCTAAGAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATTTTATTTTTAAAGAAAAAAATTAAAAATTCCATATCTAAGAAA  641

seq1  GAAAATTGTAAATAACCAATGTCTATTCAGAATATTTCTTCTCAATTAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTGTAAATAACCAATGTCTATTCAGAATATTTCTTCTCAATTAAA  691

seq1  AACAAAATAAAACATAATACAATTTCCTAACTCTCTTTAAGGCACTGGGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATAAAACATAATACAATTTCCTAACTCTCTTTAAGGCACTGGGT  741

seq1  TGGATATTCTAGCTGTAGGATGCCCTTTGAACCTAAAGTGGGACTAGAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATTCTAGCTGTAGGATGCCCTTTGAACCTAAAGTGGGACTAGAGA  791

seq1  GGTGGCTCAGTGGTTAAAATCACTGGCTGCTCTTTCAAAGGTCTCTGGTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTCAGTGGTTAAAATCACTGGCTGCTCTTTCAAAGGTCTCTGGTT  841

seq1  CAATTCTCAGAACCAGCATGGTGGCTCAGAATATTCTGCAACTACAGTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTCAGAACCAGCATGGTGGCTCAGAATATTCTGCAACTACAGTTC  891

seq1  CAGGGAATCTCACACCCTCTTTTGGCCTTGGTGGACACAAGGAATGCATG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAATCTCACACCCTCTTTTGGCCTTGGTGGACACAAGGAATGCATG  941

seq1  TAGACATAAATTCTGACAAAATACCTATAAAATTAAAGAAAAAATAGTAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATAAATTCTGACAAAATACCTATAAAATTAAAGAAAAAATAGTAA  991

seq1  AAGAAATTAGAAGGATTTGGAGAACAGTTTGATTGGTACAATGGGTCTAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATTAGAAGGATTTGGAGAACAGTTTGATTGGTACAATGGGTCTAC  1041

seq1  TCCTGGTATACAACAGGTAAGGATCTAGAATCTTGAATTC  1089
      ||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGTATACAACAGGTAAGGATCTAGAATCTTGAATTC  1081