BAC Information

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BAC

Clone NameB6Ng01-124D01
Chromosome2 (Build37)
Map Location 166,143,499 - 166,335,265
singlet/doubletdoublet
Overlap genePpia-ps2_2197.1
Upstream geneElmo2, Gm1008, Zfp334, 4833422F24Rik, Slc13a3, 2810408M09Rik, Slc2a10, Eya2, Prkcbp1, LOC546780, Ncoa3, Sulf2, LOC670775
Downstream geneBC067047, Trp53rk, Arfgef2, LOC670802, Cse1l, Stau1, LOC383774, Ddx27, AI481105, 1500012F01Rik, LOC668950, Kcnb1, Ptgis, LOC668951, B4galt5, Slc9a8, Spata2, Zfp313
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124D01.bB6Ng01-124D01.g
ACCDH927161DH927162
length1,155522
definitionDH927161|Mus musculus domesticus DNA, BAC clone: B6Ng01-124D01, 5' end.DH927162|Mus musculus domesticus DNA, BAC clone: B6Ng01-124D01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(166,143,499 - 166,144,653)(166,334,738 - 166,335,265)
sequence
gaattctacatcatttgatattggcaccacccggggctctgtgtcaacgc
cggccatcagctctcttcctaagaactgtctgtgttttgagctttgtgac
atgtgtcactttctgacagcacttggttagtctgggagctaagataaggc
gctgtaaaatgaaggttttgacattggtgtgccttgccctcgatgctcca
tgtgccggaaaggggctttggaggagagaatttttaatagataccatatc
atcacctaacttcaaaatattttgacaattcttcataggcacgactacag
caaaaatacctgtttcagtgaaagtatctaccactgcgagaaagcactgt
gaagccgatgtaactgtcaatagaaatgcgtgctttcccaatcactcctt
cctcttaattcaataacaccgtaaacacttttatgccaagtgtctgctaa
atggtgtgctaggtgagcatctgccatgctcagttctcaggttcggaaag
accacggcctctgtttgacggtttgagaggcatctgtttgcccactctgt
ttctgacttccccaccacgctctctgggggtcactcattttcccctttgt
agtcctccaggctcacagaaactgacccactcctagagacagcagtgagc
cctggctggtctaagagttattctatgccctttgccatataatgagatca
gcaaatgtaggcctgatccaagcagcctacagtgatctgtgcccaaagta
gcccaacgaatgacatggcatatttttctttggaaatctctcttggtgtg
gaaggatctggaatttgagctttcaaagccattggagtgaccttggaaag
ctgtgctgaggacaagaaatgggcacaccaataataataataataataca
acaataacagtgcagaaaccttgataaagctcttcctggatgcccagacc
tatcatccgattgttcatctgaaccaacagatccttttgaataatgaagc
tagatgagaccacacctttgaagtgtttttagctgagctaaacatctact
acatagcaaggcatgatagaatcccgttcctacacttacagcctgattcc
tttggagaatgtacctccttcctctggcatggtgtggaaggcaagaccac
tcaca
agtctgtcacagagctgggtatgacccagaggtgaggagctttggagcaa
catttactcgggaaatattaaggaaggatagaaacaacatgtggtgcctg
agcccatgttccccagaggacagagccgaggggatgtttaccgagcgagc
gctcggaaaatgtcaggtgagaacgcgcgacccagttttgcggccgcttc
agagtgagagctcccggcagctccgaggaacggggttgtcactaggcttc
cctggcagagccttcaaaggaaatcagtcctctgagtcctgtagaattgt
ttttcttgtctgggcgaggaaagctgtattctggctcacggtttaagagg
ggcagtccatcactgcagagggacacggtatgactgcagagggacacggt
atgacggtcaaggctgcactcatcccttaccgagcagggcagagagagag
tgtgtgtgagcctggactaactgtagctggagtgtgaaggtctccagcta
gtggccctgtttgagaaggctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_166143499_166144653
seq2: B6Ng01-124D01.b_44_1198

seq1  GAATTCTACATCATTTGATATTGGCACCACCCGGGGCTCTGTGTCAACGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACATCATTTGATATTGGCACCACCCGGGGCTCTGTGTCAACGC  50

seq1  CGGCCATCAGCTCTCTTCCTAAGAACTGTCTGTGTTTTGAGCTTTGTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCATCAGCTCTCTTCCTAAGAACTGTCTGTGTTTTGAGCTTTGTGAC  100

seq1  ATGTGTCACTTTCTGACAGCACTTGGTTAGTCTGGGAGCTAAGATAAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCACTTTCTGACAGCACTTGGTTAGTCTGGGAGCTAAGATAAGGC  150

seq1  GCTGTAAAATGAAGGTTTTGACATTGGTGTGCCTTGCCCTCGATGCTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAAAATGAAGGTTTTGACATTGGTGTGCCTTGCCCTCGATGCTCCA  200

seq1  TGTGCCGGAAAGGGGCTTTGGAGGAGAGAATTTTTAATAGATACCATATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCGGAAAGGGGCTTTGGAGGAGAGAATTTTTAATAGATACCATATC  250

seq1  ATCACCTAACTTCAAAATATTTTGACAATTCTTCATAGGCACGACTACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCTAACTTCAAAATATTTTGACAATTCTTCATAGGCACGACTACAG  300

seq1  CAAAAATACCTGTTTCAGTGAAAGTATCTACCACTGCGAGAAAGCACTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATACCTGTTTCAGTGAAAGTATCTACCACTGCGAGAAAGCACTGT  350

seq1  GAAGCCGATGTAACTGTCAATAGAAATGCGTGCTTTCCCAATCACTCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCGATGTAACTGTCAATAGAAATGCGTGCTTTCCCAATCACTCCTT  400

seq1  CCTCTTAATTCAATAACACCGTAAACACTTTTATGCCAAGTGTCTGCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTAATTCAATAACACCGTAAACACTTTTATGCCAAGTGTCTGCTAA  450

seq1  ATGGTGTGCTAGGTGAGCATCTGCCATGCTCAGTTCTCAGGTTCGGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGTGCTAGGTGAGCATCTGCCATGCTCAGTTCTCAGGTTCGGAAAG  500

seq1  ACCACGGCCTCTGTTTGACGGTTTGAGAGGCATCTGTTTGCCCACTCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACGGCCTCTGTTTGACGGTTTGAGAGGCATCTGTTTGCCCACTCTGT  550

seq1  TTCTGACTTCCCCACCACGCTCTCTGGGGGTCACTCATTTTCCCCTTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACTTCCCCACCACGCTCTCTGGGGGTCACTCATTTTCCCCTTTGT  600

seq1  AGTCCTCCAGGCTCACAGAAACTGACCCACTCCTAGAGACAGCAGTGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTCCAGGCTCACAGAAACTGACCCACTCCTAGAGACAGCAGTGAGC  650

seq1  CCTGGCTGGTCTAAGAGTTATTCTATGCCCTTTGCCATATAATGAGATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTGGTCTAAGAGTTATTCTATGCCCTTTGCCATATAATGAGATCA  700

seq1  GCAAATGTAGGCCTGATCCAAGCAGCCTACAGTGATCTGTGCCCAAAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGTAGGCCTGATCCAAGCAGCCTACAGTGATCTGTGCCCAAAGTA  750

seq1  GCCCAACGAATGACATGGCATATTTT--CTTGGAAATCTCTCTTGGTGTG  798
      ||||||||||||||||||||||||||   |||||||||||||||||||||
seq2  GCCCAACGAATGACATGGCATATTTTTCTTTGGAAATCTCTCTTGGTGTG  800

seq1  GAAGGATCTGGAATTTTGAGC-TTCAAAGCCATT-GAGTGACCTTGGAAA  846
      ||||||||||||| ||||||| |||||||||||| |||||||||||||||
seq2  GAAGGATCTGGAA-TTTGAGCTTTCAAAGCCATTGGAGTGACCTTGGAAA  849

seq1  GCTGTGCTGAGGACAAGGAAATGGGCACACCAATAATAATAATAATAATA  896
      |||||||||||||||| |||||||||||||||||||||||||||||||| 
seq2  GCTGTGCTGAGGACAA-GAAATGGGCACACCAATAATAATAATAATAAT-  897

seq1  ACAACAACAACAGTGCAGAAACCTTGATAAAGCTCTTCCT-GATGCCCAG  945
      ||||||| |||||||||||||||||||||||||||||||| |||||||||
seq2  ACAACAATAACAGTGCAGAAACCTTGATAAAGCTCTTCCTGGATGCCCAG  947

seq1  ACCTATCATCCGATTGTTCATCTGAACCAACAGATCCTTTTGAATAATGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATCATCCGATTGTTCATCTGAACCAACAGATCCTTTTGAATAATGA  997

seq1  AGCTAAGATGAGACCACACCTTTGAAGTG-TTTTAGCTGAGCTAAACAAT  1044
      |||| |||||||||||||||||||||||| ||||||||||||||||| ||
seq2  AGCT-AGATGAGACCACACCTTTGAAGTGTTTTTAGCTGAGCTAAAC-AT  1045

seq1  CTACTACATAGCAAGCCATGATAGAATCCCCTTCCCTACAACTTACAGCC  1094
      ||||||||||||||| |||||||||||||| || ||||| ||||||||||
seq2  CTACTACATAGCAAGGCATGATAGAATCCCGTT-CCTAC-ACTTACAGCC  1093

seq1  TGATTTCCTTTGGAGAAATGTACCCTCCTTCCTCAGGCAT-GTGTGGAAG  1143
      ||| ||||||||||| |||||| ||||||||||| ||||| |||||||||
seq2  TGA-TTCCTTTGGAG-AATGTA-CCTCCTTCCTCTGGCATGGTGTGGAAG  1140

seq1  GCAAG---ACTCACA  1155
      |||||   |||||||
seq2  GCAAGACCACTCACA  1155

seq1: chr2_166334738_166335265
seq2: B6Ng01-124D01.g_69_596 (reverse)

seq1  CAGCCTTCTCAAACAGGGCCACTAGCTGGAGACCTTCACACTCCAGCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTCTCAAACAGGGCCACTAGCTGGAGACCTTCACACTCCAGCTAC  50

seq1  AGTTAGTCCAGGCTCACACACACTCTCTCTCTGCCCTGCTCGGTAAGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTCCAGGCTCACACACACTCTCTCTCTGCCCTGCTCGGTAAGGGA  100

seq1  TGAGTGCAGCCTTGACCGTCATACCGTGTCCCTCTGCAGTCATACCGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGCAGCCTTGACCGTCATACCGTGTCCCTCTGCAGTCATACCGTGT  150

seq1  CCCTCTGCAGTGATGGACTGCCCCTCTTAAACCGTGAGCCAGAATACAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTGCAGTGATGGACTGCCCCTCTTAAACCGTGAGCCAGAATACAGC  200

seq1  TTTCCTCGCCCAGACAAGAAAAACAATTCTACAGGACTCAGAGGACTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCGCCCAGACAAGAAAAACAATTCTACAGGACTCAGAGGACTGAT  250

seq1  TTCCTTTGAAGGCTCTGCCAGGGAAGCCTAGTGACAACCCCGTTCCTCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGAAGGCTCTGCCAGGGAAGCCTAGTGACAACCCCGTTCCTCGG  300

seq1  AGCTGCCGGGAGCTCTCACTCTGAAGCGGCCGCAAAACTGGGTCGCGCGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCGGGAGCTCTCACTCTGAAGCGGCCGCAAAACTGGGTCGCGCGT  350

seq1  TCTCACCTGACATTTTCCGAGCGCTCGCTCGGTAAACATCCCCTCGGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCTGACATTTTCCGAGCGCTCGCTCGGTAAACATCCCCTCGGCTC  400

seq1  TGTCCTCTGGGGAACATGGGCTCAGGCACCACATGTTGTTTCTATCCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCTGGGGAACATGGGCTCAGGCACCACATGTTGTTTCTATCCTTC  450

seq1  CTTAATATTTCCCGAGTAAATGTTGCTCCAAAGCTCCTCACCTCTGGGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATATTTCCCGAGTAAATGTTGCTCCAAAGCTCCTCACCTCTGGGTC  500

seq1  ATACCCAGCTCTGTGACAGACTGAATTC  528
      ||||||||||||||||||||||||||||
seq2  ATACCCAGCTCTGTGACAGACTGAATTC  528