BAC Information

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BAC

Clone NameB6Ng01-124M08
Chromosome2 (Build37)
Map Location 11,781,452 - 11,782,560
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040690, LOC100040703, LOC667192, Prkcq, LOC100040733, LOC100040898, LOC667211, Pfkfb3, Rbm17, Il2ra, Il15ra, Fbxo18, Ankrd16
Downstream geneEG635919, LOC667247, Itga8, 2310047O13Rik, LOC100040837
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124M08.g
ACCDH927594
length1,096
definitionDH927594|Mus musculus domesticus DNA, BAC clone: B6Ng01-124M08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctattggtggtaatagagatgattgtttttaggcaattggtattc
ataatttattataattagcagaatctgaactagaggtgatctctttagaa
gaggaaatcagttacaaagagactataaataatccacagcaggtatgtaa
atatttaaaattgaattgtcaacaatactgttttgctttaagactttagc
atagttaaaagaaactaaccaagattctgccagctagatagttaaaaatg
cactactcacttttatctggttggttaggacaatagtttttgactaatat
gacaatatcattattagggttcttctagatctaaaagaaccttaataatg
atattgtcatattatatctatagagtctcaaaattttactgatttttcaa
attaataacaagcctattggtctgattaacaaattgttgtatcctatgaa
cataattggatttcataattataatttcataagtgtaattgtacatagac
tacaatatatctgttattactagaatatcaattttgattttgtataattt
aaattatccaaagctcaacttttcaggtgagtcactttaagcaagctagg
ccagactattttggtgaacattagatctggcagcataaatgtggcaaaca
ctaaaatgtatcatatgctgacagatccacccagaagggctagggtttgt
cttgagaaagttctccagctcagagggtagttctggcaaatatgtatccc
tattttcacagcctctccattgataatgctgtcctgctataattatttgc
aagttttggaggtcttttcatattttagataggtcatagtttgaccaaca
aattattaattttcccaaatttagcaatgttgaaagttctaattccagag
aattcataatttaccaagtctactttggggtacaagagacagagaagtct
acaactgcctaatcatggaggaactcatcaagtgatttgggacccacata
tttgcttttttcttaaatgttcaatttatttcagaagggtactcgttcat
taaaagattgagtagctactaggccccgatttgccgagttagtaat
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_11781452_11782560
seq2: B6Ng01-124M08.g_70_1165 (reverse)

seq1  ATTACTAATCTTGCCAAATC-GTGCCTAGTAGCTACTCAATCTTTTTAAA  49
      |||||||| || | |||||| | |||||||||||||||||||||||  ||
seq2  ATTACTAA-CTCGGCAAATCGGGGCCTAGTAGCTACTCAATCTTTT--AA  47

seq1  TGAACAGATTA-CCTACTGAAAATAAATTGAAACATTTAAGAAAAAAAGC  98
      ||||| || || ||| ||| |||||||||| |||||||||| ||||||||
seq2  TGAAC-GAGTACCCTTCTG-AAATAAATTG-AACATTTAAG-AAAAAAGC  93

seq1  AAATATGTGGGTTCACAATTCAACTTGATGAGTTTCCTCCAATGATTTAG  148
      ||||||||||| || ||| || |||||||||| ||||||| |||| ||||
seq2  AAATATGTGGG-TCCCAAATC-ACTTGATGAG-TTCCTCC-ATGA-TTAG  138

seq1  GCAGTTGTAGAACTTTCTTCTGTCTCTTGTACCCCAAAGTAGACTTGGTA  198
      |||||||||| ||||   ||||||||||||||||||||||||||||||||
seq2  GCAGTTGTAG-ACTT--CTCTGTCTCTTGTACCCCAAAGTAGACTTGGTA  185

seq1  AATTATGAATTCTCTGGAATTAGAACTTTCAACATTGCTAAATTTGGGAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGAATTCTCTGGAATTAGAACTTTCAACATTGCTAAATTTGGGAA  235

seq1  AATTAATAATTTGTTGGTCAAACTATGACCTATCTAAAATATGAAAAGAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATAATTTGTTGGTCAAACTATGACCTATCTAAAATATGAAAAGAC  285

seq1  CTCCAAAACTTGCAAATAATTATAGCAGGACAGCATTATCAATGGAGAGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAAACTTGCAAATAATTATAGCAGGACAGCATTATCAATGGAGAGG  335

seq1  CTGTGAAAATAGGGATACATATTTGCCAGAACTACCCTCTGAGCTGGAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAAAATAGGGATACATATTTGCCAGAACTACCCTCTGAGCTGGAGA  385

seq1  ACTTTCTCAAGACAAACCCTAGCCCTTCTGGGTGGATCTGTCAGCATATG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTCAAGACAAACCCTAGCCCTTCTGGGTGGATCTGTCAGCATATG  435

seq1  ATACATTTTAGTGTTTGCCACATTTATGCTGCCAGATCTAATGTTCACCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTTAGTGTTTGCCACATTTATGCTGCCAGATCTAATGTTCACCA  485

seq1  AAATAGTCTGGCCTAGCTTGCTTAAAGTGACTCACCTGAAAAGTTGAGCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTCTGGCCTAGCTTGCTTAAAGTGACTCACCTGAAAAGTTGAGCT  535

seq1  TTGGATAATTTAAATTATACAAAATCAAAATTGATATTCTAGTAATAACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATAATTTAAATTATACAAAATCAAAATTGATATTCTAGTAATAACA  585

seq1  GATATATTGTAGTCTATGTACAATTACACTTATGAAATTATAATTATGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATTGTAGTCTATGTACAATTACACTTATGAAATTATAATTATGAA  635

seq1  ATCCAATTATGTTCATAGGATACAACAATTTGTTAATCAGACCAATAGGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAATTATGTTCATAGGATACAACAATTTGTTAATCAGACCAATAGGC  685

seq1  TTGTTATTAATTTGAAAAATCAGTAAAATTTTGAGACTCTATAGATATAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATTAATTTGAAAAATCAGTAAAATTTTGAGACTCTATAGATATAA  735

seq1  TATGACAATATCATTATTAAGGTTCTTTTAGATCTAGAAGAACCCTAATA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACAATATCATTATTAAGGTTCTTTTAGATCTAGAAGAACCCTAATA  785

seq1  ATGATATTGTCATATTAGTCAAAAACTATTGTCCTAACCAACCAGATAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATTGTCATATTAGTCAAAAACTATTGTCCTAACCAACCAGATAAA  835

seq1  AGTGAGTAGTGCATTTTTAACTATCTAGCTGGCAGAATCTTGGTTAGTTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTAGTGCATTTTTAACTATCTAGCTGGCAGAATCTTGGTTAGTTT  885

seq1  CTTTTAACTATGCTAAAGTCTTAAAGCAAAACAGTATTGTTGACAATTCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAACTATGCTAAAGTCTTAAAGCAAAACAGTATTGTTGACAATTCA  935

seq1  ATTTTAAATATTTACATACCTGCTGTGGATTATTTATAGTCTCTTTGTAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAATATTTACATACCTGCTGTGGATTATTTATAGTCTCTTTGTAA  985

seq1  CTGATTTCCTCTTCTAAAGAGATCACCTCTAGTTCAGATTCTGCTAATTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTCCTCTTCTAAAGAGATCACCTCTAGTTCAGATTCTGCTAATTA  1035

seq1  TAATAAATTATGAATACCAATTGCCTAAAAACAATCATCTCTATTACCAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAATTATGAATACCAATTGCCTAAAAACAATCATCTCTATTACCAC  1085

seq1  CAATAGAATTC  1109
      |||||||||||
seq2  CAATAGAATTC  1096