BAC Information

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BAC

Clone NameB6Ng01-125D20
Chromosome2 (Build37)
Map Location 87,327,294 - 87,464,935
singlet/doubletdoublet
Overlap genePramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130
Upstream geneOlfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126
Downstream geneOlfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125D20.bB6Ng01-125D20.g
ACCDH927931DH927932
length8351,037
definitionDH927931|Mus musculus domesticus DNA, BAC clone: B6Ng01-125D20, 5' end.DH927932|Mus musculus domesticus DNA, BAC clone: B6Ng01-125D20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,464,104 - 87,464,935)(87,327,294 - 87,328,324)
sequence
gaattcattttgcggcatatctttgtttatctacttttgtctttatgaat
aaattatcctagattaagagagagaaagctttgatgagtaatttagtaaa
atttgctggtatttaattaggaatttttaacgtattttaatgggggacac
caaccaataattttttgtttccaacgagttatatcctcagtggttttagg
tcctttcaagttttcaacaaaaaccattgcatccccagccctcgtcaacc
tttcaatattgagataagtttacatcacttttctctatagacttgtagca
atcttaccacgtaaaatacacaaacatcaaaaatctccatatttattaat
ggttcatcattttaagagtttaaacttcttaactgtaaattcttatgcag
gaccaaaacaatatcaagttgcataatttcaacacataatgccacagatt
aaatatttctagtctacaatagaactattgaagcatatcaagaacaattt
taaaacaaaatagaaaacaacaacaacaacaaaactatcgagatcaaaat
ccaataggccaaacaccaaatcttgcagctccatgtctagtgcatataac
tcatcataggataatatagacagctcattcaattcttagtggagcctgac
tagaactttcttgggacagttgtcttgagttaagggtaaggaaagggtta
tacttaaacttcttcacaattttctgacctaatttgttccttgttgttgt
gttaaagtactctatctgaagaaaaaaaaaaaacattgcaggagcaagaa
tttgacatcagcttatacttcaagggtcatagtcc
gaattctgacatttgagaactattactggagcttgggggctagaaactgt
tgctgaggaatcctgggggacatgagctttatcttactctatctctcacc
attcattccagaacctttattggagtgtgggggctgaagcctgggttttt
tttctagtaactgacttgccttagtttgcctaaacttgctcagttctttg
acctagtctcctagactgccaatttgaagcctgtcatggagtcaagctag
ccttttcaaatacaggtatatatgtgggtctccaggttgggtaggtagga
tacctaagtacaggtgcataaggagctcaggagcttcagataagctagaa
ctggagatacaactatttcttaagtacctgacctgggttctggaaactaa
acccaggtccaaactccctaagcttattttgtctccatagtttgagtatt
tattttgtgtaacaagtacatacagtgattgtggaggtcacaagaggtgt
ctggtgccttggaactggagttagagggctgcaagccactgcaagggtac
tggtctcctgcaagaacaagtgctcttgaacttaacaggtgtccctccac
cctttctctggtcagactttaatgtttgtccagaatctaataggtggctc
tgaaaacatatgtaattgacactttttcaaattgggatataatatattat
gtatgtataaataaaatatatgtacttttttaagaaggccagtttttgaa
ccagcaacaatgagtggtcatatggagttttaagaaatgggagaaatgta
taatttatattatatctaaatagtaaacttacttttcatgttttataatc
agatccattcataatattaatggaatgtaacacttttgtttaattttgtg
cctgcacacacagcacattaattctgctattattgtgcttgtcggaagtc
agagttcaacactgagaggtagcccttcccccttcaatttattccaatat
gccattattgttcctttgcccatgtagcaatcctggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_87464104_87464935
seq2: B6Ng01-125D20.b_51_885 (reverse)

seq1  GGACTATGA-CCTTGAAGTATAAGCTGATGTCAAATTCTTGCTCCTGCTA  49
      ||||||||| |||||||||||||||||||||||||||||||||||||| |
seq2  GGACTATGACCCTTGAAGTATAAGCTGATGTCAAATTCTTGCTCCTGCAA  50

seq1  TGTTTTTTTTTTTTCTTCAGATAGAGTACTTTAACACAACAACAAGGAAC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTTTTTTTTCTTCAGATAGAGTACTTTAACACAACAACAAGGAAC  100

seq1  AAATTAGGTCAG-AAATTGTGAAGAAGTTTAAGTATAACCC-TTCCTTAC  147
      |||||||||||| |||||||||||||||||||||||||||| ||||||||
seq2  AAATTAGGTCAGAAAATTGTGAAGAAGTTTAAGTATAACCCTTTCCTTAC  150

seq1  CCTTAACTCAAGACAACTGTCCCAAGAAAGTTCTAGTCAGGCTCCACTAA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAACTCAAGACAACTGTCCCAAGAAAGTTCTAGTCAGGCTCCACTAA  200

seq1  GAATTGAATGAGCTGTCTATATTATCCTATGATGAGTTATATGCACTAGA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGAATGAGCTGTCTATATTATCCTATGATGAGTTATATGCACTAGA  250

seq1  CATGGAGCTGCAAGATTTGGTGTTTGGCCTATTGGATTTTGATCTCGATA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGCTGCAAGATTTGGTGTTTGGCCTATTGGATTTTGATCTCGATA  300

seq1  GTTTTGTTGTTGTTGTTGTTTTCTATTTTGTTTTAAAATTGTTCTTGATA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTGTTGTTGTTGTTTTCTATTTTGTTTTAAAATTGTTCTTGATA  350

seq1  TGCTTCAATAGTTCTATTGTAGACTAGAAATATTTAATCTGTGGCATTAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCAATAGTTCTATTGTAGACTAGAAATATTTAATCTGTGGCATTAT  400

seq1  GTGTTGAAATTATGCAACTTGATATTGTTTTGGTCCTGCATAAGAATTTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGAAATTATGCAACTTGATATTGTTTTGGTCCTGCATAAGAATTTA  450

seq1  CAGTTAAGAAGTTTAAACTCTTAAAATGATGAACCATTAATAAATATGGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAAGAAGTTTAAACTCTTAAAATGATGAACCATTAATAAATATGGA  500

seq1  GATTTTTGATGTTTGTGTATTTTACGTGGTAAGATTGCTACAAGTCTATA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTGATGTTTGTGTATTTTACGTGGTAAGATTGCTACAAGTCTATA  550

seq1  GAGAAAAGTGATGTAAACTTATCTCAATATTGAAAGGTTGACGAGGGCTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAGTGATGTAAACTTATCTCAATATTGAAAGGTTGACGAGGGCTG  600

seq1  GGGATGCAATGGTTTTTGTTGAAAACTTGAAAGGACCTAAAACCACTGAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGCAATGGTTTTTGTTGAAAACTTGAAAGGACCTAAAACCACTGAG  650

seq1  GATATAACTCGTTGGAAACAAAAAATTATTGGTTGGTGTCCCCCATTAAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAACTCGTTGGAAACAAAAAATTATTGGTTGGTGTCCCCCATTAAA  700

seq1  ATACGTTAAAAATTCCTAATTAAATACCAGCAAATTTTACTAAATTACTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGTTAAAAATTCCTAATTAAATACCAGCAAATTTTACTAAATTACTC  750

seq1  ATCAAAGCTTTCTCTCTCTTAATCTAGGATAATTTATTCATAAAGACAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGCTTTCTCTCTCTTAATCTAGGATAATTTATTCATAAAGACAAA  800

seq1  AGTAGATAAACAAAGATATGCCGCAAAATGAATTC  832
      |||||||||||||||||||||||||||||||||||
seq2  AGTAGATAAACAAAGATATGCCGCAAAATGAATTC  835

seq1: chr2_87327294_87328324
seq2: B6Ng01-125D20.g_68_1104

seq1  GAATTCTGACATTTGAGAACTATTACTGGAGCTTGGGGGCTAGAAACTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACATTTGAGAACTATTACTGGAGCTTGGGGGCTAGAAACTGT  50

seq1  TGCTGAGGAATCCTGGGGGACATGAGCTTTATCTTACTCTATCTCTCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGGAATCCTGGGGGACATGAGCTTTATCTTACTCTATCTCTCACC  100

seq1  ATTCATTCCAGAACCTTTATTGGAGTGTGGGGGCTGAAGCCTGGGTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTCCAGAACCTTTATTGGAGTGTGGGGGCTGAAGCCTGGGTTTTT  150

seq1  TTTCTAGTAACTGACTTGCCTTAGTTTGCCTAAACTTGCTCAGTTCTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGTAACTGACTTGCCTTAGTTTGCCTAAACTTGCTCAGTTCTTTG  200

seq1  ACCTAGTCTCCTAGACTGCCAATTTGAAGCCTGTCATGGAGTCAAGCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGTCTCCTAGACTGCCAATTTGAAGCCTGTCATGGAGTCAAGCTAG  250

seq1  CCTTTTCAAATACAGGTATATATGTGGGTCTCCAGGTTGGGTAGGTAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCAAATACAGGTATATATGTGGGTCTCCAGGTTGGGTAGGTAGGA  300

seq1  TACCTAAGTACAGGTGCATAAGGAGCTCAGGAGCTTCAGATAAGCTAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAAGTACAGGTGCATAAGGAGCTCAGGAGCTTCAGATAAGCTAGAA  350

seq1  CTGGAGATACAACTATTTCTTAAGTACCTGACCTGGGTTCTGGAAACTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGATACAACTATTTCTTAAGTACCTGACCTGGGTTCTGGAAACTAA  400

seq1  ACCCAGGTCCAAACTCCCTAAGCTTATTTTGTCTCCATAGTTTGAGTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGTCCAAACTCCCTAAGCTTATTTTGTCTCCATAGTTTGAGTATT  450

seq1  TATTTTGTGTAACAAGTACATACAGTGATTGTGGAGGTCACAAGAGGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGTGTAACAAGTACATACAGTGATTGTGGAGGTCACAAGAGGTGT  500

seq1  CTGGTGCCTTGGAACTGGAGTTAGAGGGCTGCAAGCCACTGCAAGGGTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCCTTGGAACTGGAGTTAGAGGGCTGCAAGCCACTGCAAGGGTAC  550

seq1  TGGTCTCCTGCAAGAACAAGTGCTCTTGAACTTAACAGGTGTCCCTCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTCCTGCAAGAACAAGTGCTCTTGAACTTAACAGGTGTCCCTCCAC  600

seq1  CCTTTCTCTGGTCAGACTTTAATGTTTGTCCAGAATCTAATAGGTGGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTCTGGTCAGACTTTAATGTTTGTCCAGAATCTAATAGGTGGCTC  650

seq1  TGAAAACATATGTAATTGACACTATT--CAATTGGGATATAATATATTAT  698
      ||||||||||||||||||||||| ||   |||||||||||||||||||||
seq2  TGAAAACATATGTAATTGACACTTTTTCAAATTGGGATATAATATATTAT  700

seq1  GTATGTATAAAT-AAATATATGTAC-TTTTTAAGAAGGCCAG-TTTTGAA  745
      |||||||||||| |||||||||||| |||||||||||||||| |||||||
seq2  GTATGTATAAATAAAATATATGTACTTTTTTAAGAAGGCCAGTTTTTGAA  750

seq1  -CAGCAACAATGAGTGG-CATATGGAGTTTTAAGAAATGGGAGAAATGTA  793
       |||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCAGCAACAATGAGTGGTCATATGGAGTTTTAAGAAATGGGAGAAATGTA  800

seq1  TAA-TTATATTATAATCTAAAATAGTAAACTTACTTTTTCATGTTTTATA  842
      ||| ||||||||| |||| ||||||||||||||| |||||||||||||||
seq2  TAATTTATATTAT-ATCT-AAATAGTAAACTTAC-TTTTCATGTTTTATA  847

seq1  ATCAGAATCCATTCATAATATTTAATGGAATGTAACAC-TATGTTT-ATT  890
      ||||| |||||||||||||| ||||||||||||||||| | ||||| |||
seq2  ATCAG-ATCCATTCATAATA-TTAATGGAATGTAACACTTTTGTTTAATT  895

seq1  TTGTGCCTGCACACACAGCACATTATTCTTGCTATTA-TGTGCTTGT-GG  938
      ||||||||||||||||||||||||| |  |||||||| ||||||||| ||
seq2  TTGTGCCTGCACACACAGCACATTAATTCTGCTATTATTGTGCTTGTCGG  945

seq1  AAGTCAGAAGTCAACACTGAGAGTTAGCCCTT-CCCCTTCCATTTATTCC  987
      ||||||||  ||||||||||||| |||||||| ||||||| |||||||||
seq2  AAGTCAGAGTTCAACACTGAGAGGTAGCCCTTCCCCCTTCAATTTATTCC  995

seq1  AATATTGCCATTATTGTATCCTTTGCCCATTGAGCAATCCTGGC  1031
      |||| |||||||||||| ||||||||||||  ||||||||||||
seq2  AATA-TGCCATTATTGT-TCCTTTGCCCATGTAGCAATCCTGGC  1037