BAC Information

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BAC

Clone NameB6Ng01-125H01
Chromosome2 (Build37)
Map Location 121,012,178 - 121,013,315
singlet/doubletsinglet
Overlap geneD2Ertd435e
Upstream genePla2g4e, LOC100043635, Pla2g4d, Pla2g4f, Vps39, Tmem87a, Ganc, Capn3, Zfp106, Snap23, Lrrc57, Cep27, Stard9, Cdan1, Ttbk2, Ubr1, Tmem62, Rnu3b-ps2, Ccndbp1, Epb4.2, Tgm5, LOC640543, Lcmt2, Adal, Zscan29
Downstream geneTrp53bp1, Mtap1a, Hisppd2a, Ckmt1, Strc, Catsper2, Pdia3, Ell3, Serf2, LOC574418, 2310003F16Rik, Mfap1b, Wdr76p, Mfap1a, Wdr76, Frmd5, Casc4, Mageb3, Ctdspl2, Eif3s1, 4930424G05Rik, B2m, Trim69, 4933406J08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125H01.b
ACCDH928077
length1,128
definitionDH928077|Mus musculus domesticus DNA, BAC clone: B6Ng01-125H01, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagatggttgtgagccattttgtaggtgttggaaatcaaatcca
ggtccactgggagagcaagccactgctcttaactgataagccatctctcg
agtcctttttataaaaacaaaaacaaaacaaaaaaacagaagaaaaaaaa
aaaaccccaaaaagctaaatgggattgctgcctatgcaaagctggcctgg
agttggcagtcatcttcctgctatgctatagttttcccagtgctacactg
atggggtgtgtaccagaaagcctagattttctttttctttttttataagt
catgaactaatggagagttttagccaatgctttttctgcatctccaggta
cccagatgttacatttatatataatttttctaaatgtgtaagttagtatg
ttttaaattaagggggaaaagctggttctaactagtttattaatcttaat
aaaagcctaacaagactaaataatgagaaaaactggggctggcaagatgg
ctcagtgatgaaaaaccttgctaagcaagcataaggacccaagttcagat
ctccagcatctatgtgaaagctgagcagtggctcgtgcctaacccaatgc
tggcagacagggaggcagggagtgctggggctccctggccagccaggcca
gcccaaacagtgagctcttggttcagaaagatgctgtcctaacagtaagg
taggagagtgaaaacagaagatttctgaaactaatctccacaggcacgca
cgcactcacacaacacacacacacctacctaccttgtaacataagtacat
acactacacacccagacacacaatttatttatttatttattctttttttt
ttttttttttcctagaaagggttttctcttgtagccctggcctgttgtcc
tgtaaaccaagctgggcctcaaatgcagagatccactttgccttctgcct
gccctatgctactactgacaggccacaaaatcatgtttaaaagacaaacc
ttagtaacaaacaaacaaacctatttatagataggctagtatttaaaatt
tagtcacctgaaaagtcaagttgccaagctacgaagtcatcaactgttac
aagaagagctttgcaacttagttaaaac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_121012178_121013315
seq2: B6Ng01-125H01.b_50_1177 (reverse)

seq1  GTTTTAAAACTAAGTTGCCATAAAGCTTCTTCTTGTAACAGTTTTGATGA  50
      |||||  |||||||||||   ||||| ||||||||||||||  |||||||
seq2  GTTTT--AACTAAGTTGC---AAAGC-TCTTCTTGTAACAG--TTGATGA  42

seq1  CTCTGTAGCTTTGCAACTTGACTATTTCAGGTGGACTTAAATTTTTAAAA  100
      ||  ||||||| ||||||||||| |||||||| ||| ||||||||  |||
seq2  CTTCGTAGCTTGGCAACTTGACT-TTTCAGGT-GAC-TAAATTTT--AAA  87

seq1  TACTTGCTTATCTATAAATAGGTTTTGTTTTGTTTTGTTTACTTAAGTTT  150
      |||| || |||||||||||||||||   |||||||   |||| |||| ||
seq2  TACTAGCCTATCTATAAATAGGTTT--GTTTGTTT--GTTAC-TAAGGTT  132

seq1  TGTCTTTTAAACATGATTTTGTGGCCTGTCAGTAGTAGCATAGGGCAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTAAACATGATTTTGTGGCCTGTCAGTAGTAGCATAGGGCAGGC  182

seq1  AG-AGGC-AAGTGGATCTCTGCATTTGAGG-CCAGCTTGGTTTACAGGAC  247
      || |||| |||||||||||||||||||||| |||||||||||||||||||
seq2  AGAAGGCAAAGTGGATCTCTGCATTTGAGGCCCAGCTTGGTTTACAGGAC  232

seq1  AACA-GCCAGGGCTAC-AGAG-AAACCCTGTCTAGG--AAAAAAAAAAAA  292
      |||| ||||||||||| |||| ||||||| ||||||  ||||||||||||
seq2  AACAGGCCAGGGCTACAAGAGAAAACCCTTTCTAGGAAAAAAAAAAAAAA  282

seq1  AAAAGAATAAATAAATAAATAAATTGTGTGTCTGGGTGTGTAGTGTATGT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAATAAATAAATAAATAAATTGTGTGTCTGGGTGTGTAGTGTATGT  332

seq1  ACTTATGTTACAAGGTAGGTAGGTGTGTGTGTGTTGTGTGAGTGCGTGCG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATGTTACAAGGTAGGTAGGTGTGTGTGTGTTGTGTGAGTGCGTGCG  382

seq1  TGCCTGTGGAGATTAGTTTCAGAAATCTTCTGTTTTCACTCTCCTACCTT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTGGAGATTAGTTTCAGAAATCTTCTGTTTTCACTCTCCTACCTT  432

seq1  ACTGTTAGGACAGCATCTTTCTGAACCAAGAGCTCACTGTTTGGGCTGGC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTAGGACAGCATCTTTCTGAACCAAGAGCTCACTGTTTGGGCTGGC  482

seq1  CTGGCTGGCCAGGGAGCCCCAGCACTCCCTGCCTCCCTGTCTGCCAGCAT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGGCCAGGGAGCCCCAGCACTCCCTGCCTCCCTGTCTGCCAGCAT  532

seq1  TGGGTTAGGCACGAGCCACTGCTCAGCTTTCACATAGATGCTGGAGATCT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTAGGCACGAGCCACTGCTCAGCTTTCACATAGATGCTGGAGATCT  582

seq1  GAACTTGGGTCCTTATGCTTGCTTAGCAAGGTTTTTCATCACTGAGCCAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTGGGTCCTTATGCTTGCTTAGCAAGGTTTTTCATCACTGAGCCAT  632

seq1  CTTGCCAGCCCCAGTTTTTCTCATTATTTAGTCTTGTTAGGCTTTTATTA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCAGCCCCAGTTTTTCTCATTATTTAGTCTTGTTAGGCTTTTATTA  682

seq1  AGATTAATAAACTAGTTAGAACCAGCTTTTCCCCCTTAATTTAAAACATA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAATAAACTAGTTAGAACCAGCTTTTCCCCCTTAATTTAAAACATA  732

seq1  CTAACTTACACATTTAGAAAAATTATATATAAATGTAACATCTGGGTACC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTTACACATTTAGAAAAATTATATATAAATGTAACATCTGGGTACC  782

seq1  TGGAGATGCAGAAAAAGCATTGGCTAAAACTCTCCATTAGTTCATGACTT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATGCAGAAAAAGCATTGGCTAAAACTCTCCATTAGTTCATGACTT  832

seq1  ATAAAAAAAGAAAAAGAAAATCTAGGCTTTCTGGTACACACCCCATCAGT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAAAGAAAAAGAAAATCTAGGCTTTCTGGTACACACCCCATCAGT  882

seq1  GTAGCACTGGGAAAACTATAGCATAGCAGGAAGATGACTGCCAACTCCAG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCACTGGGAAAACTATAGCATAGCAGGAAGATGACTGCCAACTCCAG  932

seq1  GCCAGCTTTGCATAGGCAGCAATCCCATTTAGCTTTTTGGGGTTTTTTTT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCTTTGCATAGGCAGCAATCCCATTTAGCTTTTTGGGGTTTTTTTT  982

seq1  TTTTCTTCTGTTTTTTTGTTTTGTTTTTGTTTTTATAAAAAGGACTCGAG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCTGTTTTTTTGTTTTGTTTTTGTTTTTATAAAAAGGACTCGAG  1032

seq1  AGATGGCTTATCAGTTAAGAGCAGTGGCTTGCTCTCCCAGTGGACCTGGA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCTTATCAGTTAAGAGCAGTGGCTTGCTCTCCCAGTGGACCTGGA  1082

seq1  TTTGATTTCCAACACCTACAAAATGGCTCACAACCATCTGGAATTC  1138
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTTCCAACACCTACAAAATGGCTCACAACCATCTGGAATTC  1128