BAC Information

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BAC

Clone NameB6Ng01-126E07
Chromosome2 (Build37)
Map Location 164,147,015 - 164,285,252
singlet/doubletdoublet
Overlap geneSvs5, Slpi, Matn4, Rbpjl, Sdc4
Upstream geneLOC269389, Jph2, 3230401D17Rik, LOC100043708, Gdap1l1, D930001I22Rik, LOC100043899, Hnf4a, 5830472M02Rik, Serinc3, Pkig, Ada, Wisp2, Kcnk15, Rims4, Ywhab, LOC381404, Tomm34, Stk4, Kcns1, Wfdc5, Wfdc12, Wfdc15a, Wfdc15b, Svs2, Svs3b, Svs4, Svs3a, Svs6
Downstream gene2610042O14Rik, 1700126L10Rik, Dbndd2, Pigt, LOC670507, Wfdc2, OTTMUSG00000016288, Wfdc6a, Spinlw1, Wfdc8, Wfdc6b, Wfdc16, OTTMUSG00000001088, Wfdc10, LOC629761, Wfdc13, Spint4, OTTMUSG00000016293, Wfdc3, Dnttip1, Ube2c, Tnnc2, Snx21, Acot8, Zswim3, Zswim1, 1700020C07Rik, Neurl2, Ctsa, Pltp, F730014I05Rik, Zfp335, LOC629777, Mmp9, Slc12a5, Ncoa5, Cd40, Cdh22, Slc35c2, Elmo2, Gm1008, Zfp334, 4833422F24Rik, Slc13a3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126E07.bB6Ng01-126E07.g
ACCDH928683DH928684
length588949
definitionDH928683|Mus musculus domesticus DNA, BAC clone: B6Ng01-126E07, 5' end.DH928684|Mus musculus domesticus DNA, BAC clone: B6Ng01-126E07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(164,284,691 - 164,285,252)(164,147,015 - 164,147,971)
sequence
gaattcccaaggactcccaaggaaataatacattttaaaaaatgactatt
ttcattttagattctcagtgttttctttctttagtacagagttttcaggc
tcttttttttttttcttttggcctctgctcccattatacacatgtttaaa
ctaaaggtcagagaagaggggcaacatactgtcttttgtttttgttcttg
tttttggagacagggtttctctgtgtagccctggctgtcctggaactcac
tctgtagaccaggctggccgcaaactcagaaatccacctgcccctgcctc
ccaagtgccgggattaaaggcatgcgccaccactgcccagctaacaaaca
ctcttaaaaacataaagttagccagatggtagtggtgcacacttttaatt
ccagcattcaggaggcaaaggcaggtggatccctgtaagtttgcagccag
cctggactacagcatgaattccaggacaggcaaagctgcacagagaaaaa
cctgtcttgaaaaaaaaaaaatcaaaaacctaaaataaataaattagtta
attaaataaagttaatggtaaaacaggttttggtcttg
gaattccagtgacatttaactttccttaatcatgacagttagacctacgt
tcataattctgctgcagtttcagccttcctctccaatattactcgtaatc
agaagtgagttgctgagatgccattaaaaaatcccagaaaacctgacgat
ctctagccttctgatgcgcctgaggcttagagagagcagggaacttagcc
ccttccttccttgtccacggagagtacagatttggtctggaagatggttc
gctgctgtgatttcctggaatctagaagagagtcagaacacagggtgctt
tgtagtagtagcagggaggtggagacgcggtggagataaaggccatgcct
ccctgcccaggtacacagtctcctaggtaagcaagaccaggtccacatgg
gatacaaagacagtggacatttggtctaaggccatgtttcccaggggccc
tcataaaactggtgattctgccaaaagttcttttattgttgagaatactt
ttcgctatcctggggttttttgttgttgttgttgttattccagatgaatt
tgcaaattgccttttctaactctgtgaagaattgagttggaattttgatg
ggaattgcattggatctgtagattacattcggcaagatggccatttttac
tgtgttaatctggccagtccatgagcatgggagatctttccatcttctga
gatcttcttcaatttctttcttcagagatttgacgctcttgtcatacaga
tctttcactttcttagagttacaccaaggtattttatattatttgtgact
attgtgaaggtgttgtttcctaatttcttctcagcctgtttatcctttga
gtagaggaaggcactgattttgtttgagtaattttataatccagccactt
tgctgaagctgttatcagtctagaatctctggtggaattttggggtcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_164284691_164285252
seq2: B6Ng01-126E07.b_50_611 (reverse)

seq1  ACTTTATTTAATTAACTAATTTATTTATTTTAGGTTTTTGATTTTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTTAATTAACTAATTTATTTATTTTAGGTTTTTGATTTTTTTTT  50

seq1  TTTCAAGACAGGTTTTTCTCTGTGCAGCTTTGACTGTCCTGGAATTCATG  100
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTCAAGACAGGTTTTTCTCTGTGCAGCTTTGCCTGTCCTGGAATTCATG  100

seq1  CTGTAGTCCAGGCTGGCTGCAAACTTACAGGGATCCACCTGCCTCTGCCT  150
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTGTAGTCCAGGCTGGCTGCAAACTTACAGGGATCCACCTGCCTTTGCCT  150

seq1  CCTGAATGCTGGAATTAAAAGTGTGCACCACTACCATCTGGCTAACTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATGCTGGAATTAAAAGTGTGCACCACTACCATCTGGCTAACTTTA  200

seq1  TGTTTTTAAGAGTGTTTGTTAGCTGGGCAGTGGTGGCGCATGCCTTTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTAAGAGTGTTTGTTAGCTGGGCAGTGGTGGCGCATGCCTTTAAT  250

seq1  CCCGGCACTTGGGAGGCAGGGGCAGGTGGATTTCTGAGTTTGCGGCCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGCACTTGGGAGGCAGGGGCAGGTGGATTTCTGAGTTTGCGGCCAGC  300

seq1  CTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCC  350

seq1  TGTCTCCAAAAACAAGAACAAAAACAAAAGACAGTATGTTGCCCCTCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCAAAAACAAGAACAAAAACAAAAGACAGTATGTTGCCCCTCTTC  400

seq1  TCTGACCTTTAGTTTAAACATGTGTATAATGGGAGCAGAGGCCAAAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCTTTAGTTTAAACATGTGTATAATGGGAGCAGAGGCCAAAAGAA  450

seq1  AAAAAAAAAAGAGCCTGAAAACTCTGTACTAAAGAAAGAAAACACTGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAGAGCCTGAAAACTCTGTACTAAAGAAAGAAAACACTGAGA  500

seq1  ATCTAAAATGAAAATAGTCATTTTTTAAAATGTATTATTTCCTTGGGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAATGAAAATAGTCATTTTTTAAAATGTATTATTTCCTTGGGAGT  550

seq1  CCTTGGGAATTC  562
      ||||||||||||
seq2  CCTTGGGAATTC  562

seq1: chr2_164147015_164147971
seq2: B6Ng01-126E07.g_68_1016

seq1  GAATTCCAGTGACATTTAACTTTCCTTAATCATGACAGTTAGACCTACGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTGACATTTAACTTTCCTTAATCATGACAGTTAGACCTACGT  50

seq1  TCATAATTCTGCTGCAGTTTCAGCCTTCCTCTCCAATATTACTCGTAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATTCTGCTGCAGTTTCAGCCTTCCTCTCCAATATTACTCGTAATC  100

seq1  AGAAGTGAGTTGCTGAGATGCCATTAAAAAATCCCAGAAAACCTGACGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGAGTTGCTGAGATGCCATTAAAAAATCCCAGAAAACCTGACGAT  150

seq1  CTCTAGCCTTCTGATGCGCCTGAGGCTTAGAGAGAGCAGGGAACTTAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGCCTTCTGATGCGCCTGAGGCTTAGAGAGAGCAGGGAACTTAGCC  200

seq1  CCTTCCTTCCTTGTCCACGGAGAGTACAGATTTGGTCTGGAAGATGGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTCCTTGTCCACGGAGAGTACAGATTTGGTCTGGAAGATGGTTC  250

seq1  GCTGCTGTGATTTCCTGGAATCTAGAAGAGAGTCAGAACACAGGGTGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGTGATTTCCTGGAATCTAGAAGAGAGTCAGAACACAGGGTGCTT  300

seq1  TGTAGTAGTAGCAGGGAGGTGGAGACGCGGTGGAGATAAAGGCCATGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTAGTAGCAGGGAGGTGGAGACGCGGTGGAGATAAAGGCCATGCCT  350

seq1  CCCTGCCCAGGTACACAGTCTCCTAGGTAAGCAAGACCAGGTCCACATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCCAGGTACACAGTCTCCTAGGTAAGCAAGACCAGGTCCACATGG  400

seq1  GATACAAAGACAGTGGACATTTGGTCTAAGGCCATGTTTCCCAGGGGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAAAGACAGTGGACATTTGGTCTAAGGCCATGTTTCCCAGGGGCCC  450

seq1  TCATAAAACTGGTGATTCTGCCAAAAGTTCTTTTATTGTTGAGAATACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAACTGGTGATTCTGCCAAAAGTTCTTTTATTGTTGAGAATACTT  500

seq1  TTCGCTATCCTGGGGTTTTTTGTTGTTGTTGTTGTTATTCCAGATGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGCTATCCTGGGGTTTTTTGTTGTTGTTGTTGTTATTCCAGATGAATT  550

seq1  TGCAAATTGCCTTTTCTAACTCTGTGAAGAATTGAGTTGGAATTTTGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATTGCCTTTTCTAACTCTGTGAAGAATTGAGTTGGAATTTTGATG  600

seq1  GGAATTGCATTGGATCTGTAGATTACATTCGGCAAGATGGCCATTTTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTGCATTGGATCTGTAGATTACATTCGGCAAGATGGCCATTTTTAC  650

seq1  TGTGTTAATCTGGCCAGTCCATGAGCATGGGAGATCTTTCCATCTTCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTAATCTGGCCAGTCCATGAGCATGGGAGATCTTTCCATCTTCTGA  700

seq1  GATCTTCTTCAATTTCTTTCTTCAGAGATTTGACGCTCTTGTCATACAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCTTCAATTTCTTTCTTCAGAGATTTGACGCTCTTGTCATACAGA  750

seq1  TCTTTCACTTTCTTAGAGTTACACCAAGGTATTTTATATTATTTGTGACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCACTTTCTTAGAGTTACACCAAGGTATTTTATATTATTTGTGACT  800

seq1  ATTGTGAAGGGTGTTGTTTTCCTAATTTCTTTCTCAGCCTGTTTATCCTT  850
      |||||||| ||||||| |||||||||||| ||||||||||||||||||||
seq2  ATTGTGAA-GGTGTTG-TTTCCTAATTTC-TTCTCAGCCTGTTTATCCTT  847

seq1  TGAGTAGAGGAAGGCCACTGA-TTTGTTTGAGTTAATTTTAT-ATCCAGC  898
      |||||||||||||| |||||| |||||||||| ||||||||| |||||||
seq2  TGAGTAGAGGAAGG-CACTGATTTTGTTTGAG-TAATTTTATAATCCAGC  895

seq1  CACTTTGCTGAAGCTGTTTATCAGGTCTAGGAATTCTCTGGTGGAATTTT  948
      |||||||||||||||| |||||| ||||||  | |||||||||||| |||
seq2  CACTTTGCTGAAGCTG-TTATCA-GTCTAG--AATCTCTGGTGGAA-TTT  940

seq1  TGGGGTCAC  957
      |||||||||
seq2  TGGGGTCAC  949