BAC Information

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BAC

Clone NameB6Ng01-126F08
Chromosome2 (Build37)
Map Location 17,990,667 - 18,141,800
singlet/doubletdoublet
Overlap geneMllt10, LOC641254, Dnajc1
Upstream geneNebl, LOC100041319, LOC100041047, 1700113O17Rik, A930004D18Rik, 2810030E01Rik
Downstream geneLOC100041388, LOC623325, LOC625815, Commd3, Bmi1, EG667477, LOC100041448, BC061194, LOC667493, LOC100041479, Pip5k2a, 4930426L09Rik, LOC667521, Armc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126F08.bB6Ng01-126F08.g
ACCDH928729DH928730
length1,010987
definitionDH928729|Mus musculus domesticus DNA, BAC clone: B6Ng01-126F08, 5' end.DH928730|Mus musculus domesticus DNA, BAC clone: B6Ng01-126F08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,990,667 - 17,991,684)(18,140,815 - 18,141,800)
sequence
gaattcaaatcccagcaaccacatggtggctcacagccatctgtaatgag
atcttatgccctcttctggtgtgtctgaaaacagctacagtgtacttata
tataataaataaatctttaaaaaacaatgaggctgtgaattaggtatatg
agactgagaatagttgttgcgtatgcacattttatagttcctttttagta
gctgtattaagatagaattacatactgtgtagttcacctgtttggagtat
ataaccgagtggtttctggtattgtcagagttgtgcaaacactatcacag
tctgttttagatccttttcatcaccctaataaaaaccttgggtccattat
aggtcaattcctgtttctccctggttcttgcgtatctaggtaaccacaac
tttgtctgttaatttgcctttttggatatttctttttttttttttttttt
ttttttggtggggattagattggatccaaacagcttgttcaagcattcgg
tgatctgtcataaactgtcactttattatcttgatacagtatcaagtagc
ctgggctggctttgaattgctatgtggtagcattgaccttcaacttgtga
tccttctgcctccatttcctgagtgctggcattacaggtttgctccaaca
agtctgggtttatgaggtgtttggagatgacccaaggcttcatgcatgct
atgtatgctatattctatctgttaagctataccctagcaacccataaaat
atttgacttcagcatattttgttttgtctgttgatcatcttatttttgtt
tttgttttcatttgtgtttgaagtctcagcacttttaagaggctaaggca
ggatatagtcagtggtatccctatttcaaagcaacagaaacaattgggac
ttagccatagggaaaggaatgaattaacgggttctgatttattctgtata
taccttgtttaaagtttcctatcacctatataaaatacccaccgaagaat
agccactgta
gaattccttggcttgtccagtaagtgttaggtttccttcctaaaggaccc
ctgctctttgatcgaagtctggccatgtatacccagtattcctcagagca
gtggcaaggacaaagctccaacccccatgtctagcgcgttcagagaatgc
cttcccttgtgggtaagactggggtgttcctagtgaagaaggtaaagtag
acagtgcatgtcagatgcccagcacactgtccaggttcaccatgcccttt
ctcgtgtactgtgtcctttcctaggaatgaccaggctctctgaacttaag
tcaaatggtcagaattccaggccaatcaagatagccacagccttgccaga
tgacatcatcacgcagcgggaggactcagcaggggccatggaggatgagg
agcacgaggctgctgagggtgagcaggagtcagcgaccacagaagcccga
cctcggaggcggaagtcagccagggcggctgaggctgtaaccagagtgga
gccagaggagaagctgagaggaaagaggcaaaaagactttgatatatcag
aacaaaacgattccagtgacgaagagaaacaacgaaaagaaagaactcgt
gctgcagaggaggcgtggactcagagtcagcagaaacttctggaattggc
attacagcaataccctaaaggagcttctgaccgctgggacaaaatagcca
aatgtgtcccgtctaagagtaaggtatgtaacactgcaggggagtgggtg
gacccatgctcctttccccggctacagccctttcttccatgccccactgg
ctacaggaacctggtgttccagttgtcttcgtctcctcctcagcttcgtg
aatctgcaccacttgccaaggagagatggaggtcaggatgctaaagaatg
ccttattgcagaatagctctgctcttccgaaataaataagacctatgaaa
cagaattcagtctgtgggcaagggtgttgccttcaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_17990667_17991684
seq2: B6Ng01-126F08.b_48_1057

seq1  GAATTCAAATCCCAGCAACCACATGGTGGCTCACAGCCATCTGTAATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATCCCAGCAACCACATGGTGGCTCACAGCCATCTGTAATGAG  50

seq1  ATCTTATGCCCTCTTCTGGTGTGTCTGAAAACAGCTACAGTGTACTTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATGCCCTCTTCTGGTGTGTCTGAAAACAGCTACAGTGTACTTATA  100

seq1  TATAATAAATAAATCTTTAAAAAACAATGAGGCTGTGAATTAGGTATATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAAATAAATCTTTAAAAAACAATGAGGCTGTGAATTAGGTATATG  150

seq1  AGACTGAGAATAGTTGTTGCGTATGCACATTTTATAGTTCCTTTTTAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGAGAATAGTTGTTGCGTATGCACATTTTATAGTTCCTTTTTAGTA  200

seq1  GCTGTATTAAGATAGAATTACATACTGTGTAGTTCACCTGTTTGGAGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTATTAAGATAGAATTACATACTGTGTAGTTCACCTGTTTGGAGTAT  250

seq1  ATAACCGAGTGGTTTCTGGTATTGTCAGAGTTGTGCAAACACTATCACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCGAGTGGTTTCTGGTATTGTCAGAGTTGTGCAAACACTATCACAG  300

seq1  TCTGTTTTAGATCCTTTTCATCACCCTAATAAAAACCTTGGGTCCATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTAGATCCTTTTCATCACCCTAATAAAAACCTTGGGTCCATTAT  350

seq1  AGGTCAATTCCTGTTTCTCCCTGGTTCTTGCGTATCTAGGTAACCACAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAATTCCTGTTTCTCCCTGGTTCTTGCGTATCTAGGTAACCACAAC  400

seq1  TTTGTCTGTTAATTTGCCTTTTTGGATATTTCTTTTTTTTTTTTTTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGTTAATTTGCCTTTTTGGATATTTCTTTTTTTTTTTTTTTTTT  450

seq1  TTTTTTGGTGGGGATTAGATTGGATCCAAACAGCTTGTTCAAGCATTCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGGTGGGGATTAGATTGGATCCAAACAGCTTGTTCAAGCATTCGG  500

seq1  TGATCTGTCATAAACTGTCACTTTATTATCTTGATACAGTATCAAGTAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGTCATAAACTGTCACTTTATTATCTTGATACAGTATCAAGTAGC  550

seq1  CTGGGCTGGCTTTGAATTGCTATGTGGTAGCATTGACCTTCAACTTGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTGGCTTTGAATTGCTATGTGGTAGCATTGACCTTCAACTTGTGA  600

seq1  TCCTTCTGCCTCCATTTCCTGAGTGCTGGCATTACAGGTTTGCTCCAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTGCCTCCATTTCCTGAGTGCTGGCATTACAGGTTTGCTCCAACA  650

seq1  AGTCTGGGTTTATGAGGTG-TTGGAGATGACCCAAGGCTTCATGCATGCT  699
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGTCTGGGTTTATGAGGTGTTTGGAGATGACCCAAGGCTTCATGCATGCT  700

seq1  ATGTATGCTATATTCTATCTGTTAAGCTATACCCTAGCAACCCATAAAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGCTATATTCTATCTGTTAAGCTATACCCTAGCAACCCATAAAAT  750

seq1  ATTTGACTTCAGCATATTTTGTTTTGTCTGTTGATCATCTTATTTTTGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACTTCAGCATATTTTGTTTTGTCTGTTGATCATCTTATTTTTGTT  800

seq1  TTTGTTTTCATTTGTGTTTGTAGTCTCAGCAC-TTTAAGAGGCTAAGGCA  848
      |||||||||||||||||||| ||||||||||| |||||||||||||||||
seq2  TTTGTTTTCATTTGTGTTTGAAGTCTCAGCACTTTTAAGAGGCTAAGGCA  850

seq1  GGATATAGTCAGTGGTAT-CCTATTTCAAAGCAACAGAAACAATTGGTAC  897
      |||||||||||||||||| |||||||||||||||||||||||||||| ||
seq2  GGATATAGTCAGTGGTATCCCTATTTCAAAGCAACAGAAACAATTGGGAC  900

seq1  TTAGCCTATAGGGAAAGGAATGAATTAATGGTTTTCTGATTTATTCTGTA  947
      |||||| ||||||||||||||||||||| ||  |||||||||||||||||
seq2  TTAGCC-ATAGGGAAAGGAATGAATTAACGG-GTTCTGATTTATTCTGTA  948

seq1  TATAACTTGTGTAAAGTTTTACATAATCACCTATAAAAAATAACCCAATG  997
      |||| ||||| ||||||||  | | |||||||||| ||||| |||||   
seq2  TATACCTTGTTTAAAGTTT--CCT-ATCACCTATATAAAAT-ACCCA--C  992

seq1  TGAAGAAAAAAGCCCACTGTA  1018
       |||||| |    ||||||||
seq2  CGAAGAATA---GCCACTGTA  1010

seq1: chr2_18140815_18141800
seq2: B6Ng01-126F08.g_69_1054 (reverse)

seq1  TTGAAGGCCAGCACCCTTGCCCACTGACTGAGTTCTGTTTCATAGCTCTC  50
      ||||||| || ||||||||||||| |||||| ||||||||||||| ||| 
seq2  TTGAAGG-CAACACCCTTGCCCACAGACTGAATTCTGTTTCATAGGTCTT  49

seq1  ATTTTCTTCGAGAAGAGC-GAGCTATTCTGCATAATGGCTATTC-TTAGC  98
      ||||  |||| ||||||| |||||||||||||  | ||| |||| |||||
seq2  ATTTATTTCG-GAAGAGCAGAGCTATTCTGCAATAAGGC-ATTCTTTAGC  97

seq1  ATCCTGACCT-CATCTCTACCTTGGCAAGT-GTGCAGATTCACG-AGCTG  145
      |||||||||| ||||||| ||||||||||| ||||||||||||| |||||
seq2  ATCCTGACCTCCATCTCT-CCTTGGCAAGTGGTGCAGATTCACGAAGCTG  146

seq1  AGGA-GAGACGAAGACAACTGTGAAACACAAGG-TCCTGTAGCCAGTGGG  193
      |||| ||||||||||||||  || ||||| ||| ||||||||||||||||
seq2  AGGAGGAGACGAAGACAAC--TGGAACACCAGGTTCCTGTAGCCAGTGGG  194

seq1  GCATGGAAGAAAGGGCTGTAAGCCGGGGAAGGAAGCATGGGTCCACCCAC  243
      ||||||||||||||||||| |||||||||| | |||||||||||||||||
seq2  GCATGGAAGAAAGGGCTGT-AGCCGGGGAAAGGAGCATGGGTCCACCCAC  243

seq1  TCCCCTGCAGTGTTACATACCTTACTCTTAGACGGGACACATTTGGCTAT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTGCAGTGTTACATACCTTACTCTTAGACGGGACACATTTGGCTAT  293

seq1  TTTGTCCCAGCGGTCAGAAGCTCCTTTAGGGTATTGCTGTAATGCCAATT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCCAGCGGTCAGAAGCTCCTTTAGGGTATTGCTGTAATGCCAATT  343

seq1  CCAGAAGTTTCTGCTGACTCTGAGTCCACGCCTCCTCTGCAGCACGAGTT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGTTTCTGCTGACTCTGAGTCCACGCCTCCTCTGCAGCACGAGTT  393

seq1  CTTTCTTTTCGTTGTTTCTCTTCGTCACTGGAATCGTTTTGTTCTGATAT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTTCGTTGTTTCTCTTCGTCACTGGAATCGTTTTGTTCTGATAT  443

seq1  ATCAAAGTCTTTTTGCCTCTTTCCTCTCAGCTTCTCCTCTGGCTCCACTC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGTCTTTTTGCCTCTTTCCTCTCAGCTTCTCCTCTGGCTCCACTC  493

seq1  TGGTTACAGCCTCAGCCGCCCTGGCTGACTTCCGCCTCCGAGGTCGGGCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTACAGCCTCAGCCGCCCTGGCTGACTTCCGCCTCCGAGGTCGGGCT  543

seq1  TCTGTGGTCGCTGACTCCTGCTCACCCTCAGCAGCCTCGTGCTCCTCATC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGTCGCTGACTCCTGCTCACCCTCAGCAGCCTCGTGCTCCTCATC  593

seq1  CTCCATGGCCCCTGCTGAGTCCTCCCGCTGCGTGATGATGTCATCTGGCA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGGCCCCTGCTGAGTCCTCCCGCTGCGTGATGATGTCATCTGGCA  643

seq1  AGGCTGTGGCTATCTTGATTGGCCTGGAATTCTGACCATTTGACTTAAGT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGTGGCTATCTTGATTGGCCTGGAATTCTGACCATTTGACTTAAGT  693

seq1  TCAGAGAGCCTGGTCATTCCTAGGAAAGGACACAGTACACGAGAAAGGGC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAGCCTGGTCATTCCTAGGAAAGGACACAGTACACGAGAAAGGGC  743

seq1  ATGGTGAACCTGGACAGTGTGCTGGGCATCTGACATGCACTGTCTACTTT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGAACCTGGACAGTGTGCTGGGCATCTGACATGCACTGTCTACTTT  793

seq1  ACCTTCTTCACTAGGAACACCCCAGTCTTACCCACAAGGGAAGGCATTCT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTTCACTAGGAACACCCCAGTCTTACCCACAAGGGAAGGCATTCT  843

seq1  CTGAACGCGCTAGACATGGGGGTTGGAGCTTTGTCCTTGCCACTGCTCTG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACGCGCTAGACATGGGGGTTGGAGCTTTGTCCTTGCCACTGCTCTG  893

seq1  AGGAATACTGGGTATACATGGCCAGACTTCGATCAAAGAGCAGGGGTCCT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATACTGGGTATACATGGCCAGACTTCGATCAAAGAGCAGGGGTCCT  943

seq1  TTAGGAAGGAAACCTAACACTTACTGGACAAGCCAAGGAATTC  986
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAAGGAAACCTAACACTTACTGGACAAGCCAAGGAATTC  986