BAC Information

Click to search

BAC

Clone NameB6Ng01-126P22
Chromosome2 (Build37)
Map Location 86,284,100 - 86,447,696
singlet/doubletdoublet
Overlap geneOlfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083
Upstream gene4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1
Downstream geneOlfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126P22.bB6Ng01-126P22.g
ACCDH929226DH929227
length1,092910
definitionDH929226|Mus musculus domesticus DNA, BAC clone: B6Ng01-126P22, 5' end.DH929227|Mus musculus domesticus DNA, BAC clone: B6Ng01-126P22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,446,588 - 86,447,696)(86,284,100 - 86,285,023)
sequence
gaattcattttgaaaggcatcactgaccgtcctgagatgcaggccccact
ctttgggttgctcttcattatctatctgatctcagcagtgggtaatttgg
gcatcatcattattactaacgtgggctccaggctctgcatacccatgtac
tttttttctcaaacatctggctttcactgatcttggatattctacagcca
ttggaccaaaaatgttagttaattttgttgcagagaataattcagtctcc
tattacctttgtgctacacagttagcttgctttcttctttttattacttg
tgaacttttaattttttcttcaatgtcctatgaccgttatgtgcctatat
gtaaccctcttctctatactgtcatcatgtcacaaagaatatgttgggta
cttgtggcagtcccatatatctacagtgtatttgtatctctaattgtcac
aataaggttattcactttatccttttgtggctacaatatcatcaatcttt
ttttctgtgattgtatcccattaatatctttgctctgttcaaatacacat
gaggttgaagtgataattaggttctatgcaacatttgatttgatttcctc
tcttctggtcgtccttgtgtcttatctgtttattctcataactattctga
ggatgaaatctgctgcaggcagacgcaaggctttttcaacctgtgggtct
cacctcactgtggtcagtgtcttctatgggactttgatatttatgtatgt
gcagcctaagtacagtcaaacatttgagactgataaagtgtcttccatat
tttacacacttgttatcccaatgttgaatcccttgatctattccttgagg
aataaagatgcaaaagatgccatagaaagaacctggaaaaagatagttac
cagtttttcttaaaggttgcatacaaatatagccatgacaatccatttct
attgtaaacctactttggtttctcatagaaaagacaatagatcaatatat
attactctgttgaattttggtactaatctaactttttatataatatatag
aagaagaaaagaaaagtgctgcttctcaggggagggagaatt
gaattccatgatgtacaaagaacaggaaataaaatatacagatctggtaa
ataaataaataaataaataaataaataaataaataaatacttatacaaat
ttttgtagccaagcataatcatctatctgaaatgctgcactcactcaaag
gtacatatacactaaattaagaaaataataggttctatgaagaaactaca
agttgtttcagtgacaaaatactccaaattaaccagaaccgggagaatca
cagatgtagctaaggttgatgtgatgggtaagtttcatgtgatgggatat
acaggcaaggtctatagtgatttacacgcaaagcagagtactcagttttc
tctcactgtggtcaactgagattctcataaaactcatagaaatgaatgaa
ttagaaaggagctagagaaagtacccaaggagctaaaggggtctgcagcc
ctctaagataaacaacaatatgaacaacctagtaatcctgagagttgtgt
ctctggttgcacatgtagcagaggatggcctagttggccatcaataagag
gagaggcccttggtcttgggaagattatatgctccagtacaggagaatgc
cagggccaggaagcagagtgggtaggttggggaacagggcaggtggatgg
tataagggacttttaaggatagcatttgaaatataaatgaagaaaatttg
aataaaaaaaagaaaaaaagatgatttttaaaaattaacaaatatgtgac
aaaaatatgcaacccattataaacataatgagtcagtatacataccattt
agccctgctctaaagctctgttctatttaaggagtacaaacctataccat
gcatctgtgatcttaacctttatgatatttggtttgacttaattatccca
ttagtatcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86446588_86447696
seq2: B6Ng01-126P22.b_47_1138 (reverse)

seq1  AATTCTCCCTTCCCCCTGAAGGAAAGCAAGGGCACTTTTCTTTTCTTCTC  50
      ||||||||||  |||||||    |||||   |||||||||||||||||| 
seq2  AATTCTCCCT--CCCCTGA---GAAGCA---GCACTTTTCTTTTCTTCTT  42

seq1  TAATATAATTATAATAAAAAAGTTAGATTAGTACCCAAAATTCAAACAGA  100
        |||| ||||||   ||||||||||||||||| ||||||||| ||||| 
seq2  CTATAT-ATTATA--TAAAAAGTTAGATTAGTA-CCAAAATTC-AACAG-  86

seq1  AGTAATATATATTGATCCTATTTGTCTTTTCTATGAGGAAACCAAAGTAG  150
      |||||||||||||||| ||| ||||||||||||||| |||||||||||||
seq2  AGTAATATATATTGAT-CTA-TTGTCTTTTCTATGA-GAAACCAAAGTAG  133

seq1  GTTTACAATAGAAATGGATTGTCATGGCTATATTTGTATGCAACCTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACAATAGAAATGGATTGTCATGGCTATATTTGTATGCAACCTTTAA  183

seq1  GAAAAACTGGTAACTATCTTTTTCCAGGTTCTTTCTATGGCATCTTTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACTGGTAACTATCTTTTTCCAGGTTCTTTCTATGGCATCTTTTGC  233

seq1  ATCTTTATTCCTCAAGGAATAGATCAAGGGATTCAACATTGGGATAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTATTCCTCAAGGAATAGATCAAGGGATTCAACATTGGGATAACAA  283

seq1  GTGTGTAAAATATGGAAGACACTTTATCAGTCTCAAATGTTTGACTGTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTAAAATATGGAAGACACTTTATCAGTCTCAAATGTTTGACTGTAC  333

seq1  TTAGGCTGCACATACATAAATATCAAAGTCCCATAGAAGACACTGACCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCTGCACATACATAAATATCAAAGTCCCATAGAAGACACTGACCAC  383

seq1  AGTGAGGTGAGACCCACAGGTTGAAAAAGCCTTGCGTCTGCCTGCAGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGGTGAGACCCACAGGTTGAAAAAGCCTTGCGTCTGCCTGCAGCAG  433

seq1  ATTTCATCCTCAGAATAGTTATGAGAATAAACAGATAAGACACAAGGACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATCCTCAGAATAGTTATGAGAATAAACAGATAAGACACAAGGACG  483

seq1  ACCAGAAGAGAGGAAATCAAATCAAATGTTGCATAGAACCTAATTATCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAAGAGAGGAAATCAAATCAAATGTTGCATAGAACCTAATTATCAC  533

seq1  TTCAACCTCATGTGTATTTGAACAGAGCAAAGATATTAATGGGATACAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACCTCATGTGTATTTGAACAGAGCAAAGATATTAATGGGATACAAT  583

seq1  CACAGAAAAAAAGATTGATGATATTGTAGCCACAAAAGGATAAAGTGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAAAAAAGATTGATGATATTGTAGCCACAAAAGGATAAAGTGAAT  633

seq1  AACCTTATTGTGACAATTAGAGATACAAATACACTGTAGATATATGGGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTATTGTGACAATTAGAGATACAAATACACTGTAGATATATGGGAC  683

seq1  TGCCACAAGTACCCAACATATTCTTTGTGACATGATGACAGTATAGAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAAGTACCCAACATATTCTTTGTGACATGATGACAGTATAGAGAA  733

seq1  GAGGGTTACATATAGGCACATAACGGTCATAGGACATTGAAGAAAAAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTTACATATAGGCACATAACGGTCATAGGACATTGAAGAAAAAATT  783

seq1  AAAAGTTCACAAGTAATAAAAAGAAGAAAGCAAGCTAACTGTGTAGCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTCACAAGTAATAAAAAGAAGAAAGCAAGCTAACTGTGTAGCACA  833

seq1  AAGGTAATAGGAGACTGAATTATTCTCTGCAACAAAATTAACTAACATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAATAGGAGACTGAATTATTCTCTGCAACAAAATTAACTAACATTT  883

seq1  TTGGTCCAATGGCTGTAGAATATCCAAGATCAGTGAAAGCCAGATGTTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCCAATGGCTGTAGAATATCCAAGATCAGTGAAAGCCAGATGTTTG  933

seq1  AGAAAAAAAGTACATGGGTATGCAGAGCCTGGAGCCCACGTTAGTAATAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAAGTACATGGGTATGCAGAGCCTGGAGCCCACGTTAGTAATAA  983

seq1  TGATGATGCCCAAATTACCCACTGCTGAGATCAGATAGATAATGAAGAGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGATGCCCAAATTACCCACTGCTGAGATCAGATAGATAATGAAGAGC  1033

seq1  AACCCAAAGAGTGGGGCCTGCATCTCAGGACGGTCAGTGATGCCTTTCAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAAAGAGTGGGGCCTGCATCTCAGGACGGTCAGTGATGCCTTTCAA  1083

seq1  AATGAATTC  1109
      |||||||||
seq2  AATGAATTC  1092

seq1: chr2_86284100_86285023
seq2: B6Ng01-126P22.g_69_978

seq1  GAATTCCATGATGTACAAAGAACAGGAAATAAAATATACAGATCTGGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGATGTACAAAGAACAGGAAATAAAATATACAGATCTGGTAA  50

seq1  ATAAATAAATAAATAAATAAATAAATAAATAAATAAATACTTATACAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATAAATAAATAAATAAATAAATAAATAAATACTTATACAAAT  100

seq1  TTTTGTAGCCAAGCATAATCATCTATCTGAAATGCTGCACTCACTCAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTAGCCAAGCATAATCATCTATCTGAAATGCTGCACTCACTCAAAG  150

seq1  GTACATATACACTAAATTAAGAAAATAATAGGTTCTATGAAGAAACTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATATACACTAAATTAAGAAAATAATAGGTTCTATGAAGAAACTACA  200

seq1  AGTTGTTTCAGTGACAAAATACTCCAAATTAACCAGAACCGGGAGAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTTCAGTGACAAAATACTCCAAATTAACCAGAACCGGGAGAATCA  250

seq1  CAGATGTAGCTAAGGTTGATGTGATGGGTAAGTTTCATGTGATGGGATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTAGCTAAGGTTGATGTGATGGGTAAGTTTCATGTGATGGGATAT  300

seq1  ACAGGCAAGGTCTATAGTGATTTACACGCAAAGCAGAGTACTCAGTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAAGGTCTATAGTGATTTACACGCAAAGCAGAGTACTCAGTTTTC  350

seq1  TCTCACTGTGGTCAACTGAGATTCTCATAAAACTCATAGAAATGAATGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTGTGGTCAACTGAGATTCTCATAAAACTCATAGAAATGAATGAA  400

seq1  TTAGAAAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGGTCTGCAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGGTCTGCAGCC  450

seq1  CTCTAAGATAAACAACAATATGAACAACCTAGTAATCCTGAGAGTTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAGATAAACAACAATATGAACAACCTAGTAATCCTGAGAGTTGTGT  500

seq1  CTCTGGTTGCACATGTAGCAGAGGATGGCCTAGTTGGCCATCAATAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTTGCACATGTAGCAGAGGATGGCCTAGTTGGCCATCAATAAGAG  550

seq1  GAGAGGCCCTTGGTCTTGGGAAGATTATATGCTCCAGTACAGGAGAATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCCCTTGGTCTTGGGAAGATTATATGCTCCAGTACAGGAGAATGC  600

seq1  CAGGGCCAGGAAGCAGGAGTGGGTAGGTTGGGGAACAGGGCAGGTGGATG  650
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAGGGCCAGGAAGCA-GAGTGGGTAGGTTGGGGAACAGGGCAGGTGGATG  649

seq1  GTATAAGGGAC-TTTAAGGATAGCATTTGAAATATAAATGAAGAAAAATT  699
      ||||||||||| ||||||||||||||||||||||||||||||||||| ||
seq2  GTATAAGGGACTTTTAAGGATAGCATTTGAAATATAAATGAAGAAAATTT  699

seq1  GAATAAAAAAAAGAAAAAAAAGAATGAATTTTTAAAAATTAACAAATATG  749
      ||||||||||||||||||||   ||| |||||||||||||||||||||| 
seq2  GAATAAAAAAAAGAAAAAAA--GATG-ATTTTTAAAAATTAACAAATAT-  745

seq1  GTGACAAAAATAATGCAACACATTATAAACATAATGAGTCAAGTATACAA  799
      ||||||||||| ||||||| |||||||||||||||||||| ||||||| |
seq2  GTGACAAAAAT-ATGCAACCCATTATAAACATAATGAGTC-AGTATAC-A  792

seq1  TACCATTTAAGCCCTGCTCTATAGCTCCTGTTCTATTTAAAGAGTACAAA  849
      |||||||| |||||||||||| |||| ||||||||||||| |||||||||
seq2  TACCATTT-AGCCCTGCTCTAAAGCT-CTGTTCTATTTAAGGAGTACAAA  840

seq1  ACTATACCAATGCATCTTGTGATCTTTACACTTTATGAATATTTTGTTTG  899
       ||||||| ||||||| ||||||||| || ||||||| |||||| |||||
seq2  CCTATACC-ATGCATC-TGTGATCTTAAC-CTTTATG-ATATTTGGTTTG  886

seq1  ACTAAATATATCCCATTAGTATCCA  924
      ||| ||| |||||||||||||||||
seq2  ACTTAAT-TATCCCATTAGTATCCA  910