BAC Information

Click to search

BAC

Clone NameB6Ng01-127C24
Chromosome2 (Build37)
Map Location 162,326,435 - 162,327,551
singlet/doubletsinglet
Overlap genePtprt
Upstream genenone
Downstream geneLOC100043895, LOC100043896, LOC100043696, LOC497655, LOC668947, Sfrs6, L3mbtl, LOC241765, Sgk2, Ift52, Mybl2, 2410116G06Rik, LOC269389, Jph2, 3230401D17Rik, LOC100043708, Gdap1l1, D930001I22Rik, LOC100043899
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127C24.bB6Ng01-127C24.g
ACCDH929368DH929369
length1,1231,132
definitionDH929368|Mus musculus domesticus DNA, BAC clone: B6Ng01-127C24, 5' end.DH929369|Mus musculus domesticus DNA, BAC clone: B6Ng01-127C24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattttgttttgtgaaatcaacttttccctgcatgaattttgtg
tcatattctgaatggttccccatcattttcctttgcactctgttagaggt
gttattttttcttttcacatttaattactcaatctgtttgtagctggttc
tgagtgtggtgtaacttatgggccttacttagacctgaatcatttcacca
ctgtaaatgttttcttctgaagaaggatgaacgtggagcccctgacttgt
ctttatctcgtacttcccagggtatgtgagaattatttcactctttacat
ttgtaaaatagtagaaggaaagaacttgggcggcttctttagatccattt
gtgtcttacatgttctataggtggatcaggctatgagctcttgggcagat
ctgccaactctcctgttccttcattaggaaggatgtatgtatagaggcca
gaagttgttattggcattttcctctattgatctttatctactgagacagg
gtatctcattgaatccagaacttgccactttggccagtaagtccctagga
tctgtccatcccggtttccagtgctgggtttacagattcttgctgcccca
catgactctcttacgttggttctgggaacctgaacccacatcctcatcct
taatcagcaggcactttacccacggagccatctttcaaccctcttttgct
tttggagcatttttgtgtgtacattttgtcaacctttctgattttggtct
agtcttcaggcgtgttctcctaatcatgtgtctccacagaaatgtgctgg
cagctgtgacatgtgagttgcatatctagaggggtctgggtgcaatatag
tcccacttattggtgagaaagcctagcactgggaagggataccacttgcc
agagggtgctttacctgtggcagagcctggagtctggcccaggaactctg
actggtcaggtttacactcactttcttttaagttgggggttggcttagac
catagcccggtggcatagagaccagcagagtgcttactgagtgtatctgc
tccacaccccaggtgcttccattcaggtccttctggatttgggctttttt
ttggttatagacatggacccagg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtggaac
aaaacacccatggaaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcattatactagcaagatttatcgaaa
ggacccagaatgtagctgtctcttgtgagaactatgccgggcctagcaac
acagaagtggaatgctccacagtcagctaatgatgatcaaatggcttcct
atggagagcttagagaaaagtaccaggagctaaaggatctccaccttaag
gtgaaccacattatgacctacagacctggaccttggactctagcgcaatg
gtatccaaaagatgcatcgccaatctgaaaaagtccattgaaccgaactt
tggtaccgtaatgtacctaggacatacgtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_162326435_162327551
seq2: B6Ng01-127C24.b_43_1165 (reverse)

seq1  CCTGTGGTCCATGTCTATAACAAAAAAAAAGACCCAAAT-CAGAAGGACC  49
      |||| |||||||||||||||| ||||||||| ||||||| ||||||||||
seq2  CCTG-GGTCCATGTCTATAACCAAAAAAAAG-CCCAAATCCAGAAGGACC  48

seq1  TGAATGGGAGCACTTGGGGTGT-GAGCAGATACACTCAGTAAGCACTCTG  98
      ||||||| ||||| |||||||| |||||||||||||||||||||||||| 
seq2  TGAATGGAAGCACCTGGGGTGTGGAGCAGATACACTCAGTAAGCACTCT-  97

seq1  GCTTGTCTCTATGCCA-CGGGCTATGGTCT-AGCCAACCCCCAACCTTAA  146
      ||| |||||||||||| ||||||||||||| |||||||||||||| | ||
seq2  GCTGGTCTCTATGCCACCGGGCTATGGTCTAAGCCAACCCCCAACTTAAA  147

seq1  AG-AAGTGAGTGTAAA-CTGTACAGTCAGAGTTCCTGGGCCAGACTCCAG  194
      || ||||||||||||| |||  ||||||||||||||||||||||||||||
seq2  AGAAAGTGAGTGTAAACCTGACCAGTCAGAGTTCCTGGGCCAGACTCCAG  197

seq1  GCTCTGCCACAGGT-AAGCA-CCTCTGGCAAGTGGTATCCCTTCCCAGTG  242
      |||||||||||||| ||||| |||||||||||||||||||||||||||||
seq2  GCTCTGCCACAGGTAAAGCACCCTCTGGCAAGTGGTATCCCTTCCCAGTG  247

seq1  CTAGGCTTTCTCACCAATAAGTGGGACTATATTGCA-CCAGACCCCTCTA  291
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTAGGCTTTCTCACCAATAAGTGGGACTATATTGCACCCAGACCCCTCTA  297

seq1  GATATGCAACTCACATGTCACAGCTGCCAGCACATTTCTGTGGAGACACA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGCAACTCACATGTCACAGCTGCCAGCACATTTCTGTGGAGACACA  347

seq1  TGATTAGGAGAACACGCCTGAAGACTAGACCAAAATCAGAAAGGTTGACA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAGGAGAACACGCCTGAAGACTAGACCAAAATCAGAAAGGTTGACA  397

seq1  AAATGTACACACAAAAATGCTCCAAAAGCAAAAGAGGGTTGAAAGATGGC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTACACACAAAAATGCTCCAAAAGCAAAAGAGGGTTGAAAGATGGC  447

seq1  TCCGTGGGTAAAGTGCCTGCTGATTAAGGATGAGGATGTGGGTTCAGGTT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTGGGTAAAGTGCCTGCTGATTAAGGATGAGGATGTGGGTTCAGGTT  497

seq1  CCCAGAACCAACGTAAGAGAGTCATGTGGGGCAGCAAGAATCTGTAAACC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAACCAACGTAAGAGAGTCATGTGGGGCAGCAAGAATCTGTAAACC  547

seq1  CAGCACTGGAAACCGGGATGGACAGATCCTAGGGACTTACTGGCCAAAGT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTGGAAACCGGGATGGACAGATCCTAGGGACTTACTGGCCAAAGT  597

seq1  GGCAAGTTCTGGATTCAATGAGATACCCTGTCTCAGTAGATAAAGATCAA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGTTCTGGATTCAATGAGATACCCTGTCTCAGTAGATAAAGATCAA  647

seq1  TAGAGGAAAATGCCAATAACAACTTCTGGCCTCTATACATACATCCTTCC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGAAAATGCCAATAACAACTTCTGGCCTCTATACATACATCCTTCC  697

seq1  TAATGAAGGAACAGGAGAGTTGGCAGATCTGCCCAAGAGCTCATAGCCTG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAGGAACAGGAGAGTTGGCAGATCTGCCCAAGAGCTCATAGCCTG  747

seq1  ATCCACCTATAGAACATGTAAGACACAAATGGATCTAAAGAAGCCGCCCA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACCTATAGAACATGTAAGACACAAATGGATCTAAAGAAGCCGCCCA  797

seq1  AGTTCTTTCCTTCTACTATTTTACAAATGTAAAGAGTGAAATAATTCTCA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTTCCTTCTACTATTTTACAAATGTAAAGAGTGAAATAATTCTCA  847

seq1  CATACCCTGGGAAGTACGAGATAAAGACAAGTCAGGGGCTCCACGTTCAT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCCTGGGAAGTACGAGATAAAGACAAGTCAGGGGCTCCACGTTCAT  897

seq1  CCTTCTTCAGAAGAAAACATTTACAGTGGTGAAATGATTCAGGTCTAAGT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTCAGAAGAAAACATTTACAGTGGTGAAATGATTCAGGTCTAAGT  947

seq1  AAGGCCCATAAGTTACACCACACTCAGAACCAGCTACAAACAGATTGAGT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCCATAAGTTACACCACACTCAGAACCAGCTACAAACAGATTGAGT  997

seq1  AATTAAATGTGAAAAGAAAAAATAACACCTCTAACAGAGTGCAAAGGAAA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATGTGAAAAGAAAAAATAACACCTCTAACAGAGTGCAAAGGAAA  1047

seq1  ATGATGGGGAACCATTCAGAATATGACACAAAATTCATGCAGGGAAAAGT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGGGAACCATTCAGAATATGACACAAAATTCATGCAGGGAAAAGT  1097

seq1  TGATTTCACAAAACAAAATGGAATTC  1117
      ||||||||||||||||||||||||||
seq2  TGATTTCACAAAACAAAATGGAATTC  1123