BAC Information

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BAC

Clone NameB6Ng01-128D08
Chromosome2 (Build37)
Map Location 82,743,082 - 82,743,816
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp804a, LOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292
Downstream geneLOC433440, Fsip2, LOC545429, Ppia-ps2_981.1, LOC100040818, LOC668077, Zc3h15, Itgav, Dnmt3l-ps1, D430039N05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128D08.bB6Ng01-128D08.g
ACCDH930123DH930124
length1,1641,128
definitionDH930123|Mus musculus domesticus DNA, BAC clone: B6Ng01-128D08, 5' end.DH930124|Mus musculus domesticus DNA, BAC clone: B6Ng01-128D08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatgcctgagaagcacctgaaaacatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagttaaaatggctaagatcaaaatttcagttgacagc
agatgctggcgaggatatggaaaaagaggaacactcctccattgttggtg
gaattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccagaggatcccgcagtacctctcctggtc
atatatccagaagatgttccaactgataagaaggacacttgctccactat
gttcatagcagccttatttataatagccagaaaatggaaagaatccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttagacaatg
aagtactactcagctattaaaaagaatgaatttatgaaattcctagccta
atggatggacctggaggtcatcatcctgagtgaggtaacccaatcacaaa
agaactcacatagtatgtactcactgataagtggatattagcccagaaac
ttagaatacccaggatataagatacaatttgttaaacacgtgaaactcaa
gaacaaagaccaaagtgtggacactgtgccccttcttagaattcggaaca
aaacacccatgaaaggagttacagagacaaagtttggagctgagatgaaa
ggatggaccatccagagactgctgtattcggggatccatcacataatcag
cttccaaacgctgacaccattgcatacactagcaagattttgctcaaagg
acccagatatagctgtctcttgtgagcctatgccggggcctaacacacac
agaagtgaatgctcaaagtcagctattggatggatcacagggccctcaat
gaggagctagggaaagtaaccagagctaaagggatctgcaccctatagtg
aacaacaatacgactatcagtaccctggagctcatgtctagctgctatgt
atcagaagatgcctagtagacattcatggaaagagaggcccattgtttgt
gcaacctttatgcccagtttaggggatgtcagcccaaaaatagaaatggt
ggggtggggtgtta
gaattctcttttttattcttttttcttattggatattttctttatttaca
tttcaaatgttatccatttccccagtccctcctgaacccatttattccac
ccctctttttatgagggtgcttccccaaccacccactcctgcctcccagc
cttggcattcccctacaatggagacatcatgatttcttttgagaattctg
tttagatctttacatcatgtattttattaaaattgcattctttgagggtt
tgttgttgttgtttgtttgtttttattttcttttttgatgctcagttttt
ccttggttctttctttattttatgtattagccctctattgatgtgtagct
ggtaaaatactttacaattctttagcctgttggttggtcctttgttatac
gtaagctttttaaatttgttttcagtgcctgagttaaaatgtgttctgct
tagaaaaatcttttcctatgccaatgaattcagggttatcccctactttc
tcttctatcaagttctgtgtatctggtatatgttgaagccattgatcctt
ctgaagttgagttttgtgcaggatgatgagttttggatctttggaatctt
ctgcatgcatccattcagtttcattaacactatttgttgaagatgctgtg
tgaatcccattgtgtatttttggcttctgtatcaaaaatcaggtgtccat
aggggcagggaagcttgggtttgtctgactttgcttccttgagaggcatg
catgcatcattgatttttttcctgttatagtccacggctcctggggcatg
atgtgccttcctgttcttgagagacttatgtattctcccaggcagtgaaa
cattcagactgctttgtatttctctgcatgtcccattactagtcaaagaa
tcatggaagcttgacaggacaattggccttagacattagtcttgtatacc
ctgtataacttgcaaagatccttgtatcctggcaatgacactttattgat
catggcaattgccattctttttttgttttcgaaaagggatgaaaggtctg
atttccttcatagaaatgttgcagcccaatatgttatgtcctccctcaag
ctagcctgaataaattcccgtgggcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_82743082_82743816
seq2: B6Ng01-128D08.g_463_1192 (reverse)

seq1  TATGGCCACAGGGAATTTAATCAGGCTAGCTTGAGGGAGGGCATAACATA  50
      |||| |||| ||||||||| |||||||||||||||||||| |||||||| 
seq2  TATGCCCAC-GGGAATTTATTCAGGCTAGCTTGAGGGAGGACATAACAT-  48

seq1  ATTGAGGCTGCAACAATTTTATTGAGAGAAATCAGACTTTTCATACCTTT  100
      |||| |||||||||| || || |||  |||||||||| |||||| |||||
seq2  ATTG-GGCTGCAACATTTCTA-TGAAGGAAATCAGACCTTTCATCCCTTT  96

seq1  TTCAGAAACAAAATAGAATGGCAATTGCCATGATCAATAAAGTTGTCATT  150
      |  | ||  |||| |||||||||||||||||||||||||||| |||||||
seq2  TCGAAAACAAAAAAAGAATGGCAATTGCCATGATCAATAAAG-TGTCATT  145

seq1  GCCAGGATACAAGGATCTTTGCAAGTTATACAGGGTATACAAGACTAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGATACAAGGATCTTTGCAAGTTATACAGGGTATACAAGACTAATG  195

seq1  TCTAAGGCCAATTGTCCTGTCAAGCTTCCATGATTCCTTGACTAGTAATG  250
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCTAAGGCCAATTGTCCTGTCAAGCTTCCATGATTCTTTGACTAGTAATG  245

seq1  GGACATGCAGAGAAATACAAAGCAGTCTGAATGTTTCACTGCCTGGGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATGCAGAGAAATACAAAGCAGTCTGAATGTTTCACTGCCTGGGAGA  295

seq1  ATACATAAGTCTCTCAAGAACAGGAAGGCACATCATGCCCCAGGAGCCGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAAGTCTCTCAAGAACAGGAAGGCACATCATGCCCCAGGAGCCGT  345

seq1  GGACTATAACAGGAAAAAAATCAATGATGCATGCATGCCTCTCAAGGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTATAACAGGAAAAAAATCAATGATGCATGCATGCCTCTCAAGGAAG  395

seq1  CAAAGTCAGACAAACCCAAGCTTCCCTGCCCCTATGGACACCTGATTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCAGACAAACCCAAGCTTCCCTGCCCCTATGGACACCTGATTTTT  445

seq1  GATACAGAAGCCAAAAATACACAATGGGATTCACACAGCATCTTCAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGAAGCCAAAAATACACAATGGGATTCACACAGCATCTTCAACAA  495

seq1  ATAGTGTTAATGAAACTGAATGGATGCATGCAGAAGATTCCAAAGATCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTTAATGAAACTGAATGGATGCATGCAGAAGATTCCAAAGATCCA  545

seq1  AAACTCATCATCCTGCACAAAACTCAACTTCAGAAGGATCAATGGCTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCATCATCCTGCACAAAACTCAACTTCAGAAGGATCAATGGCTTCA  595

seq1  ACATATACCAGATACACAGAACTTGATAGAAGAGAAAGTAGGGGATAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATACCAGATACACAGAACTTGATAGAAGAGAAAGTAGGGGATAACC  645

seq1  CTGAATTCATTGGCATAGGAAAAGATTTTTCTAAGCAGAACACATTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTCATTGGCATAGGAAAAGATTTTTCTAAGCAGAACACATTTTAA  695

seq1  CTCAGGCACTGAAAACAAATTTAAAAAGCTTACGT  735
      |||||||||||||||||||||||||||||||||||
seq2  CTCAGGCACTGAAAACAAATTTAAAAAGCTTACGT  730