BAC Information

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BAC

Clone NameB6Ng01-128H18
Chromosome2 (Build37)
Map Location 52,147,583 - 52,330,970
singlet/doubletdoublet
Overlap geneNeb, LOC100041670, Arl5a, Cacnb4
Upstream geneLOC666810, LOC100041614, Tas2r134, LOC433426, Ppia-ps2_635.1, Rbm43, LOC100041634, Nmi, Tnfaip6, Rif1
Downstream geneOTTMUSG00000012638, Stam2, Fmnl2, Prpf40a, Arl6ip6, LOC666872
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128H18.bB6Ng01-128H18.g
ACCDH930323DH930324
length1,05078
definitionDH930323|Mus musculus domesticus DNA, BAC clone: B6Ng01-128H18, 5' end.DH930324|Mus musculus domesticus DNA, BAC clone: B6Ng01-128H18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(52,329,917 - 52,330,970)(52,147,583 - 52,147,657)
sequence
gaattcagttcctcgtgcttgagcatcaagtacttcaacaacagagctgt
cttctagaacttccctcccccaagtagacacgtcctgtatcccacagttg
ggacagtgtctgggacaggttaaagtaaatccacagcttgtaggagcaga
gagagccgagctgactgccccacctctgtacatccctcccctgtcttttt
ggggctggctccttattgaggatgttaggaagtactgcagaaagaaaatg
gctgggccgagagcaatgagtcactcccggagtcatctctgcagatctcg
ggatgtggcctgcaactataaaacccagaggagagctctctctggaaagt
gatttccttgttgcctggaaccatcattcatcctgtgacatgtttctata
ggaaaaatgcttctctctcccgttctctccctcgctcactcctcattctg
tacttctgtctccagtccaaacctgtagcttttgcggtgaaaacgaacgt
gagctactgtggtgccctggacgaagatgtgcccgttcccagcacagcca
tctcctttgacgccaaggactttcttcacattaaagaggtaaatgtagga
catactgcacctcatcacctgccaaaaaagctagagctgggagtcagcct
gtgccaagcccagaggagaggcgacccagagagctgccagtgtggagcct
cggttaacgctctgggcctctgcatcctctcatctcactgagacttagag
gatgagatcatcgcctacctgcactgccacgtggtcccagcagtagggca
cacccaacatttagaatgatagcatggactttgatttttgtaccacacct
gttctctgtctgtctgtctgtctgtctgtctatctctttgtcctgtctct
ctatgttttcttctataccctctctgtctctctgtctctctgtctgccct
tctctgtctttctctgtctccgtctgtctctcttgtctttctctgtttct
ttgtgtagtgtgtgtggtgtgtggaaccaacccaggcctgttggagacta

ttcggagagacctgcagaggatcttggaaaacccagagcagatacaagag
aattctgggagatttgggagtggggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_52329917_52330970
seq2: B6Ng01-128H18.b_46_1095 (reverse)

seq1  TAGTCTCCACTAGACCCTGGGTTTGGTTCCCAACACACACACACACAC-A  49
      |||||||||  ||  |||||| ||||||||  |||||| ||||||||| |
seq2  TAGTCTCCAACAG-GCCTGGG-TTGGTTCC--ACACAC-CACACACACTA  45

seq1  CACAAAGAGACAGAGAAAGACAAGAGAGACAGACGGAGACAGAGAAAGAC  99
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGAAACAGAGAAAGACAAGAGAGACAGACGGAGACAGAGAAAGAC  95

seq1  AGAG-AGGGCAGACAGAGAGACAGAGAGACAGAGAAGGATATAGAGAGAA  148
      |||| ||||||||||||||||||||||||||||| ||| ||||||   ||
seq2  AGAGAAGGGCAGACAGAGAGACAGAGAGACAGAG-AGGGTATAGAAGAAA  144

seq1  ACATAGAGAGACAGGACAAAGAGATAGACAGACAGACAGACAGACAGACA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAGAGACAGGACAAAGAGATAGACAGACAGACAGACAGACAGACA  194

seq1  GAGAACAGGTGTGGTACAAAATTCAAAGTCCATGCTATCATTCTAAATGT  248
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAGAACAGGTGTGGTACAAAAATCAAAGTCCATGCTATCATTCTAAATGT  244

seq1  TGGGTGTGCCCTACTGCTGGGACCACGTGGCAGTGCAGGTAGGCGATGAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTGCCCTACTGCTGGGACCACGTGGCAGTGCAGGTAGGCGATGAT  294

seq1  CTCATCCTCTAAGTCTCAGTGAGATGAGAGGATGCAGAGGCCCAGAGCGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCCTCTAAGTCTCAGTGAGATGAGAGGATGCAGAGGCCCAGAGCGT  344

seq1  TAACCGAGGCTCCACACTGGCAGCTCTCTGGGTCGCCTCTCCTCTGGGCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCGAGGCTCCACACTGGCAGCTCTCTGGGTCGCCTCTCCTCTGGGCT  394

seq1  TGGCACAGGCTGACTCCCAGCTCTAGCTTTTTTGGCAGGTGATGAGGTGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACAGGCTGACTCCCAGCTCTAGCTTTTTTGGCAGGTGATGAGGTGC  444

seq1  AGTATGTCCTACATTTACCTCTTTAATGTGAAGAAAGTCCTTGGCGTCAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTCCTACATTTACCTCTTTAATGTGAAGAAAGTCCTTGGCGTCAA  494

seq1  AGGAGATGGCTGTGCTGGGAACGGGCACATCTTCGTCCAGGGCACCACAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATGGCTGTGCTGGGAACGGGCACATCTTCGTCCAGGGCACCACAG  544

seq1  TAGCTCACGTTCGTTTTCACCGCAAAAGCTACAGGTTTGGACTGGAGACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCACGTTCGTTTTCACCGCAAAAGCTACAGGTTTGGACTGGAGACA  594

seq1  GAAGTACAGAATGAGGAGTGAGCGAGGGAGAGAACGGGAGAGAGAAGCAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTACAGAATGAGGAGTGAGCGAGGGAGAGAACGGGAGAGAGAAGCAT  644

seq1  TTTTCCTATAGAAACATGTCACAGGATGAATGATGGTTCCAGGCAACAAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTATAGAAACATGTCACAGGATGAATGATGGTTCCAGGCAACAAG  694

seq1  GAAATCACTTTCCAGAGAGAGCTCTCCTCTGGGTTTTATAGTTGCAGGCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCACTTTCCAGAGAGAGCTCTCCTCTGGGTTTTATAGTTGCAGGCC  744

seq1  ACATCCCGAGATCTGCAGAGATGACTCCGGGAGTGACTCATTGCTCTCGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCGAGATCTGCAGAGATGACTCCGGGAGTGACTCATTGCTCTCGG  794

seq1  CCCAGCCATTTTCTTTCTGCAGTACTTCCTAACATCCTCAATAAGGAGCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCATTTTCTTTCTGCAGTACTTCCTAACATCCTCAATAAGGAGCC  844

seq1  AGCCCCAAAAAGACAGGGGAGGGATGTACAGAGGTGGGGCAGTCAGCTCG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCAAAAAGACAGGGGAGGGATGTACAGAGGTGGGGCAGTCAGCTCG  894

seq1  GCTCTCTCTGCTCCTACAAGCTGTGGATTTACTTTAACCTGTCCCAGACA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTCTGCTCCTACAAGCTGTGGATTTACTTTAACCTGTCCCAGACA  944

seq1  CTGTCCCAACTGTGGGATACAGGACGTGTCTACTTGGGGGAGGGAAGTTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCCAACTGTGGGATACAGGACGTGTCTACTTGGGGGAGGGAAGTTC  994

seq1  TAGAAGACAGCTCTGTTGTTGAAGTACTTGATGCTCAAGCACGAGGAACT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGACAGCTCTGTTGTTGAAGTACTTGATGCTCAAGCACGAGGAACT  1044

seq1  GAATTC  1054
      ||||||
seq2  GAATTC  1050

seq1: chr2_52147583_52147657
seq2: B6Ng01-128H18.g_77_151

seq1  GGAGAGACCTGCAGAGGATCTTGGAAAACCCAGAGCAGATACAAGAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGACCTGCAGAGGATCTTGGAAAACCCAGAGCAGATACAAGAGAAT  50

seq1  TCTGGGAGATTTGGGAGTGGGGTGG  75
      |||||||||||||||||||||||||
seq2  TCTGGGAGATTTGGGAGTGGGGTGG  75