BAC Information

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BAC

Clone NameB6Ng01-128J05
Chromosome2 (Build37)
Map Location 51,317,046 - 51,318,222
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666781, LOC227885, Rnd3, LOC666802
Downstream geneLOC666810, LOC100041614, Tas2r134, LOC433426, Ppia-ps2_635.1, Rbm43, LOC100041634, Nmi, Tnfaip6, Rif1, Neb, LOC100041670, Arl5a, Cacnb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128J05.bB6Ng01-128J05.g
ACCDH930391DH930392
length1,1651,161
definitionDH930391|Mus musculus domesticus DNA, BAC clone: B6Ng01-128J05, 5' end.DH930392|Mus musculus domesticus DNA, BAC clone: B6Ng01-128J05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacagcatgtaagtgatgtggctaccataaaaaaaaaacccacc
cagaggggctaggaaatgaataagaagcttgtttccacagttgtgtttcc
aacacagaaagcctgatagatagctaactgaaaaccctggccagagtata
caggttgagctttgtgggttgggtagacaatgacagccgtttctgaaatc
agaatagtctggactgtgtcactgcagggtctctcctctcatagagggga
tggtttaggaaagttctagagcttgaagctacagcttatgaggaggtgga
attcgttgtgaaaaaaataaagtcactctcatttaaatgatttgaataaa
ttctttcatttcaaaatattagacataggaccgttgaaatcctctcaatg
taaagaagggtaagtgtcgcccccagtggctctgctgtgctcctgctcag
ctcaggctctgtaacatcacaacagcccaacaaagttactagtagtattc
tggtttgtattcctatcctaatgctttgttataaaataactccaatttgg
cagttcaaaattataaacacttagaatctcatagtctgttgattaaagcc
acagagtttatccatgtgccttaggctcgtgtcttctcttagcaagattt
ggacaatctgctctcaggttggagtttcactcagggagaggctgagcacg
tgcaagatcctgcttcatgcttactcatttggctatggtcccatctcacg
ccttcactggcgcttgcctggagaaattacctgcttcccacttgtgaatt
ttaatatgcctgctgccagcaagtcaggttgctccttagaaggcaaagga
tttgaaacaaatgagagaatggatcctcaagaaggaagcttccatccttc
tataatctatcctgagttcctccttctcttttcttcactcttttgttgtt
cccaaaatagtcactactgcaacttgcacccattaagagacatcatataa
atatgctgctattttagaggctactacagtttgatcattttaagtgctga
caaacatcaagtttagaaagaaataattacccaagtcttggactgctcta
gcaaagaggcttcatttctatgaaattggctgcagagaccagttcttgtt
ccatatcagtcgaaa
gaattctcacctttaggaataccgaatggcagagaagcacctgaaaaaat
gctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaaatcaggtgacag
cagatgctggcgtggatgtggagaaagaggaacactcctccattgttggt
gggattgcaggcttgtacaaccactctggagatcagtctggcggttcctc
agaaaactggatatagtactaccggaggatccagcaatacctctcctggg
catatatccagaagatgccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaggaacccaga
tgcccctcaacagaggaatggatacagaagatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctggcca
aatggatggacctggagggcatcatcctgagtgaggtaacacattcacaa
aggaactcacacaatatgtactcactgataagtggatattagcccaaaac
ctaagatacccaagatataagatacaatttcctaaacacatgaaactcaa
gaaaaatgaagactgaagtgtgaacactatgcccctccttagaagtggga
gcaaaacacccttggaaggagttacagagacaaagtttggagttgagata
aaaggatggaccatgtagacactaccatatccggggatccatcccataat
cagcttccaaatgctgacaccattgcatacactagcaagattatgctgaa
aggaccctgatatagctgtctcttgtcagagttatgcctgggcctagcaa
cataagaagtggatgctcacattcggctattggatggatcacatggcccc
aatgaaggagctagagaagtacccaagagcttaaggaatctgcaccctat
agtggacacattatgaactacagtacccgagcttctgactctagctgcat
attgcatcaaagatggcttagtccgtcatcacttgaagagaggctattga
accgcaccttttatgccctgatacgggtagacgcaggccaatatgggaga
tgcgtgggtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_51317046_51318222
seq2: B6Ng01-128J05.b_48_1212

seq1  GAATTCAACAGCATGTAAGTGATGTGGCTACCATAAAAAAAAAACCCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGCATGTAAGTGATGTGGCTACCATAAAAAAAAAACCCACC  50

seq1  CAGAGGGGCTAGGAAATGAATAAGAAGCTTGTTTCCACAGTTGTGTTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGGCTAGGAAATGAATAAGAAGCTTGTTTCCACAGTTGTGTTTCC  100

seq1  AACACAGAAAGCCTGATAGATAGCTAACTGAAAACCCTGGCCAGAGTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGAAAGCCTGATAGATAGCTAACTGAAAACCCTGGCCAGAGTATA  150

seq1  CAGGTTGAGCTTTGTGGGTTGGGTAGACAATGACAGCCGTTTCTGAAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTGAGCTTTGTGGGTTGGGTAGACAATGACAGCCGTTTCTGAAATC  200

seq1  AGAATAGTCTGGACTGTGTCACTGCAGGGTCTCTCCTCTCATAGAGGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGTCTGGACTGTGTCACTGCAGGGTCTCTCCTCTCATAGAGGGGA  250

seq1  TGGTTTAGGAAAGTTCTAGAGCTTGAAGCTACAGCTTATGAGGAGGTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTAGGAAAGTTCTAGAGCTTGAAGCTACAGCTTATGAGGAGGTGGA  300

seq1  ATTCGTTGTGAAAAAAATAAAGTCACTCTCATTTAAATGATTTGAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGTTGTGAAAAAAATAAAGTCACTCTCATTTAAATGATTTGAATAAA  350

seq1  TTCTTTCATTTCAAAATATTAGACATAGGACCGTTGAAATCCTCTCAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCATTTCAAAATATTAGACATAGGACCGTTGAAATCCTCTCAATG  400

seq1  TAAAGAAGGGTAAGTGTCGCCCCCAGTGGCTCTGCTGTGCTCCTGCTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAGGGTAAGTGTCGCCCCCAGTGGCTCTGCTGTGCTCCTGCTCAG  450

seq1  CTCAGGCTCTGTAACATCACAACAGCCCAACAAAGTTACTAGTAGTATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCTCTGTAACATCACAACAGCCCAACAAAGTTACTAGTAGTATTC  500

seq1  TGGTTTGTATTCCTATCCTAATGCTTTGTTATAAAATAACTCCAATTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGTATTCCTATCCTAATGCTTTGTTATAAAATAACTCCAATTTGG  550

seq1  CAGTTCAAAATTATAAACACTTAGAATCTCATAGTCTGTTGATTAAAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCAAAATTATAAACACTTAGAATCTCATAGTCTGTTGATTAAAGCC  600

seq1  ACAGAGTTTATCCATGTGCCTTAGGCTCGTGTCTTCTCTTAGCAAGATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTTTATCCATGTGCCTTAGGCTCGTGTCTTCTCTTAGCAAGATTT  650

seq1  GGACAATCTGCTCTCAGGTTGGAGTTTCACTCAGGGAGAGGCTGAGCACG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAATCTGCTCTCAGGTTGGAGTTTCACTCAGGGAGAGGCTGAGCACG  700

seq1  TGCAAGATCCTGCTTCATGCTTACTCATTTGGCTATGGTCCCATCTCAGG  750
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGCAAGATCCTGCTTCATGCTTACTCATTTGGCTATGGTCCCATCTCACG  750

seq1  CCTTCACTGGCGCTTGCCTGGAGAAATTACCTGCTTCCCACTTGTGAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACTGGCGCTTGCCTGGAGAAATTACCTGCTTCCCACTTGTGAATT  800

seq1  TTAATATGCCTGCTGCCAGCAAGTCAGGTTGCTCCTTAGAAGGCAAAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATGCCTGCTGCCAGCAAGTCAGGTTGCTCCTTAGAAGGCAAAGGA  850

seq1  TTTGAAACAAATGAGAGAATGGATCCTCAAGAAGGAAGCTTCCATCCTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAACAAATGAGAGAATGGATCCTCAAGAAGGAAGCTTCCATCCTTC  900

seq1  TATAATCTATCCTGAGTTCCTCCTTCTCTTTTCTTCACTCTTTTGTTGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCTATCCTGAGTTCCTCCTTCTCTTTTCTTCACTCTTTTGTTGTT  950

seq1  CCCAAAATAGTCACTACTGCAACCTGCACCCATTAAGAGACAATCATATA  1000
      ||||||||||||||||||||||| ||||||||||||||||| ||||||||
seq2  CCCAAAATAGTCACTACTGCAACTTGCACCCATTAAGAGAC-ATCATATA  999

seq1  AATATGCTGCTATTTTAGAGGCTACTACAGTTTGATCATTTTAAGTGCTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGCTGCTATTTTAGAGGCTACTACAGTTTGATCATTTTAAGTGCTG  1049

seq1  ACAAACATCAAGTTTAGAAAGAAATAATTTACCCAAAGGTCATTTGACTG  1100
      ||||||||||||||||||||||||||| ||||||||  ||| || |||||
seq2  ACAAACATCAAGTTTAGAAAGAAATAA-TTACCCAA--GTC-TTGGACTG  1095

seq1  CTCCATAGCAAAAGAGGGCTTCATTTCTAGGATATTGGGCTGCAGAGACC  1150
      |||  |||| ||||| ||||||||||||| || ||| ||||||||||| |
seq2  CTC--TAGC-AAAGA-GGCTTCATTTCTATGAAATT-GGCTGCAGAGA-C  1139

seq1  CAGTTCTTGTCCAATATGCAGTCGAAA  1177
      |||||||||| | |||| |||||||||
seq2  CAGTTCTTGTTCCATAT-CAGTCGAAA  1165