BAC Information

Click to search

BAC

Clone NameB6Ng01-128J11
Chromosome2 (Build37)
Map Location 16,916,113 - 16,917,236
singlet/doubletsinglet
Overlap gene4930515L03Rik
Upstream genePlxdc2, LOC383665
Downstream geneNebl, LOC100041319, LOC100041047
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128J11.bB6Ng01-128J11.g
ACCDH930401DH930402
length1,0741,085
definitionDH930401|Mus musculus domesticus DNA, BAC clone: B6Ng01-128J11, 5' end.DH930402|Mus musculus domesticus DNA, BAC clone: B6Ng01-128J11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttggccagacatctggagatgggaccttattaaggtgactat
gcactgtggctctaatctcaaaacaaaccctgctctgagggcattgacca
aggcttcagcaattaacttgtagtgtagaaagtcttcatgagttagtgag
tagatagaaatgattagagttgtatttagaaagaggacacatacttttga
ttttatttttttttttggttattttatttatttacatttccaatgttatc
ccccttcctggttttccctccacaacccccctattccattccccctccac
tctgcttctatgaggatgctcctccacccatccacccactcctgcttcac
ctccctaacattggtgcatcaagccttcacagaaccaggggcctcccctc
tcattgatgccagaaaaggcaatccactgctacataagcagttggatccc
tggcccctccatgtgtactctatggttcctagtttagtccctgggagctc
tggggggtctggttggttgatagtattgttcttcctatggggttgcaaac
accttctgctccttcagtccttcccctaactcttccagtgggttcccatg
ctcagtctgttgattggctgtgagcatctgcatctatatttgccaggctt
tggccgagtctctcaggggacagctataccaggctcctgtaagcaagctc
ttcttggcatcagccagtgtctgtgttttatgtctgcagatgggatggat
ccctaggtgggggcagtttcttgatggtctttctttcagtctctgctcta
ctctttgtccttgcatttcctttagacaggaacagttctgtgttaatatt
tctgaggtggaggagtgttcctctttaggtgctttctccactatttgctt
tccacagttgagaattctctgttagctctgttccccattataatagggtt
atttggttctctggagtctacttctgagtctttgtatgtatggatattag
tcctctatcagatgtaagattgctaagatgtttctcaatctgctggttgt
tgccgtttgtcctaatgaagtgtc
gaattcactctcgcacctgcgtacaaggcttgtttactagttagacacag
gggaggcccgcgccatcttataatggcgattgctcacggcacaaacggct
ctcctcagagattactggaggcacgcacgcgattgctcgcagcacgtacc
ggctctccacaagttaaaacaaacaagcacataaatttgaaagaacagtt
taatgaggaagaatatgaaggaagagctagagagtgagtggacttgatca
aaacagtttatatgaatatatgtaattctcaataaaaatattttaaaaga
aaaatataagccttcgtgctgtggtaggaagtggggctgtaatatatgat
taagtcatagactgaagctttagtgattaagatcatactctgatcatggg
tcccagagaggtccatgtgaggacactattaaagttagccattagctcct
agcagatggccactatcacactgtatcctagtctcacatacccagtctac
agactatgagaaataattgccacctatctattacccaggaacactaggga
gctgtttgagtgggactcttttggattactattatataaaaacagctccc
caaatactctacaatgttttgttatagcatttcagctggcagaatagcct
ctctgactttaggcattaagaaatgtatactagaccaggtattcccatgg
ggctgcccaaatagagttggatttttttcaggttacagctgtatttaccc
tcttttggagaactaaggaatcattacatacccagaattcaatagtgtcc
ctcctttcaaattcaaggttgtttccttgctctgaattgtagtggaattt
taccaggattgtcagtataataaagatattgtgctttccacttctctaag
ataaaatcacaacccggaatggcaaccgattctttgaataactctttcag
tctattatttttcccattgcaaaggattatatattatacataatatatgg
tataagagcagatttttcggatgactgcttaactgctgattgaaggatga
catacgaggaacatgcctcttagatttctataagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_16916113_16917236
seq2: B6Ng01-128J11.g_67_1151

seq1  GAATTCACTCTCGCACCTGCGTACAAGGCTTGTTTACTAGTTAGACACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTCGCACCTGCGTACAAGGCTTGTTTACTAGTTAGACACAG  50

seq1  GGGAGGCCCGCGCCATCTTATAATGGCGATTGCTCACGGCACAAACGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCCCGCGCCATCTTATAATGGCGATTGCTCACGGCACAAACGGCT  100

seq1  CTCCTCAGAGATTACTGGAGGCACGCACGCGATTGCTCGCAGCACGTACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCAGAGATTACTGGAGGCACGCACGCGATTGCTCGCAGCACGTACC  150

seq1  GGCTCTCCACAAGTTAAAACAAACAAGCACATAAATTTGAAAGAACAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTCCACAAGTTAAAACAAACAAGCACATAAATTTGAAAGAACAGTT  200

seq1  TAATGAGGAAGAATATGAAGGAAGAGCTAGAGAGTGAGTGGACTTGATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGGAAGAATATGAAGGAAGAGCTAGAGAGTGAGTGGACTTGATCA  250

seq1  AAACAGTTTATATGAATATATGTAATTCTCAATAAAAATATTTTAAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTTTATATGAATATATGTAATTCTCAATAAAAATATTTTAAAAGA  300

seq1  AAAATATAAGCCTTCGTGCTGTGGTAGGAAGTGGGGCTGTAATATATGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATAAGCCTTCGTGCTGTGGTAGGAAGTGGGGCTGTAATATATGAT  350

seq1  TAAGTCATAGACTGAAGCTTTAGTGATTAAGATCATACTCTGATCATGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCATAGACTGAAGCTTTAGTGATTAAGATCATACTCTGATCATGGG  400

seq1  TCCCAGAGAGGTCCATGTGAGGACACTATTAAAGTTAGCCATTAGCTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAGAGGTCCATGTGAGGACACTATTAAAGTTAGCCATTAGCTCCT  450

seq1  AGCAGATGGCCACTATCACACTGTATCCTAGTCTCACATACCCAGTCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATGGCCACTATCACACTGTATCCTAGTCTCACATACCCAGTCTAC  500

seq1  AGACTATGAGAAATAATTGCCACCTATCTATTACCCAGGAACACTAGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATGAGAAATAATTGCCACCTATCTATTACCCAGGAACACTAGGGA  550

seq1  GCTGTTTGAGTGGGACTCTTTTGGATTACTATTATATAAAAACAGCTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTGAGTGGGACTCTTTTGGATTACTATTATATAAAAACAGCTCCC  600

seq1  CAAATACTCTACAATGTTTTGTTATAGCATTTCAGCTGGCAGAATAGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACTCTACAATGTTTTGTTATAGCATTTCAGCTGGCAGAATAGCCT  650

seq1  CTCTGACTTTAGGCATTAAGAAATGTATACTAGACCAGGTATTCCCATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACTTTAGGCATTAAGAAATGTATACTAGACCAGGTATTCCCATGG  700

seq1  GGCTGCCCAAATAGAGTTGGATTTTTTTCAGGTTACAGCTGTATTTACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCCCAAATAGAGTTGGATTTTTTTCAGGTTACAGCTGTATTTACCC  750

seq1  TCTTTTGGAGAACTAAGGAATCATTACATACCCAGAATTCAATAGTGTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGGAGAACTAAGGAATCATTACATACCCAGAATTCAATAGTGTCC  800

seq1  CTCC-TTCAAATTCAAGGTTGTTTCCTTGCTCTGAATTGTAGTGGAATTT  849
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTCAAATTCAAGGTTGTTTCCTTGCTCTGAATTGTAGTGGAATTT  850

seq1  TACCAGGATTGTCAGTATAATAAAGATATTGTGCTTTCCACTTCTCTAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGGATTGTCAGTATAATAAAGATATTGTGCTTTCCACTTCTCTAAG  900

seq1  ATTAAAATTCACAACCC-GAATGGCAACCGAATCTTTTGAATAACTCTTT  948
      ||  ||| ||||||||| ||||||||||||| || |||||||||||| ||
seq2  AT--AAAATCACAACCCGGAATGGCAACCGATTC-TTTGAATAACTC-TT  946

seq1  TCAGTCTATTATTTTTTCCCCATTGGCAAAAGTATTTTATATATATATAT  998
      ||||||||||||||||  |||||||   |||| ||| |||||        
seq2  TCAGTCTATTATTTTT--CCCATTG--CAAAGGATTATATAT--------  984

seq1  ATATATATATATATATATATATATATACATATTTTTTTGAAATGACATGT  1048
       |||| ||| ||||||   ||||    || ||||||  |  |||||   |
seq2  -TATACATA-ATATAT-GGTATAAGAGCAGATTTTTCGG--ATGAC---T  1026

seq1  CTTTAATCATGTCTG-TAATTGAGTAGTGATTGACTAAATATGATGAACA  1097
        ||||      ||| | |||||  || || ||||   ||| || |||||
seq2  GCTTAA------CTGCTGATTGA--AG-GA-TGAC---ATACGAGGAACA  1063

seq1  TGCCATCATTTTAGTATTTCTATAAGG  1124
      ||||    | |||| ||||||||||||
seq2  TGCC----TCTTAG-ATTTCTATAAGG  1085