BAC Information

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BAC

Clone NameB6Ng01-128J15
Chromosome2 (Build37)
Map Location 78,635,521 - 78,636,441
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp533, BC003993, LOC667920, OTTMUSG00000016703, LOC383717, LOC100040476
Downstream geneLOC100040494, 4930401B11Rik, Ube2e3, LOC100040526, Itga4, Cerkl, Neurod1, Ssfa2, Ppp1r1c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128J15.bB6Ng01-128J15.g
ACCDH930409DH930410
length1,150919
definitionDH930409|Mus musculus domesticus DNA, BAC clone: B6Ng01-128J15, 5' end.DH930410|Mus musculus domesticus DNA, BAC clone: B6Ng01-128J15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcaagattttatcgaaaggacccagat
gtagctgtctcttgtgtgactatgccggggcctagcaaacacagaagtgg
atgctcacagtcagctaatggatggatcacagggctcccaatggaggagc
tagagaaagtacccaaggagctaaagggatctcaccctataggtggaaca
acatatgaactatcagtaccctgagctctgactttagctgcatatgtatc
aaagatggctagtcgcatcactgaaagagagcccattgaaccgcgaactt
gtgtgcccggtacagggaaccgccaggcaagggggggagatggggtggtt

gaattctttgttcagttctgagccccattgcacctagctgatttggattt
ataaaatagccggtaaatctgtaaaccataatgaagtttgtctttctgtt
ttatttagcttctaaatttctcaggcaggtagtagatattaaactcagaa
gccaatgctccacctaatcctttctaccttacaaattttctttcctctac
tctattgatattgcagttgtgagagaaacttggggcactcaaaaaatagg
gacaaaaatgatcattaaaacattgtaatagtacatataatattgtgaca
ttattatataatattctatattaataatattatcatatatatatataata
aaaataaagaagaaagctagaaaaaaatcccaacttttggtacagatgtg
aacattttgatgtggagcaggagggagggaggaagcccagagagcaagag
taattgtgtagatctttgtgtcacagtgagtggtgaagttcatctggtca
catctcttatgttgctttgcttcactttaaactcctttgcttctccactt
agaagaaaaggctgagcataagctggaagaatgacttctttccagtcttt
ctccattcgtcctgtcctcctccaggcgggaactatttgcagcagtgctt
catgcttcgtgttctctaattgctacccatctgtttccattaactctcag
agccggttgtctgatttaaatatcgtgttcttttttctaaacacttcaaa
ccaaattctaacctcatatatgtgcatagcatttctaaagaactctgtat
ccaaggagaacatcactacctacttttaaatagtttttaaaagatataat
gtaattacattatttcctctttccagggctttttcttgctctctttaagt
ttcatggactttctttaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_78635521_78636441
seq2: B6Ng01-128J15.g_70_988 (reverse)

seq1  TTTAAAGAAAGTCCATGAACTTGAAAGAGAGCAAGAAAAAGCCTTGGAAA  50
      |||||||||||||||||||  | |||||||||||||||||||| ||||||
seq2  TTTAAAGAAAGTCCATGAAACTTAAAGAGAGCAAGAAAAAGCCCTGGAAA  50

seq1  GAGGAAATAATGTAATTACATTATAATCTTTTAAAAACTATTTAAAAAGT  100
      |||||||||||||||||||||||| |||||||||||||||||| ||||||
seq2  GAGGAAATAATGTAATTACATTAT-ATCTTTTAAAAACTATTT-AAAAGT  98

seq1  AGGTAGTGATGTTCTCCTTGGATACAGAGTTCTTTAGAAATGCTATGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGTGATGTTCTCCTTGGATACAGAGTTCTTTAGAAATGCTATGCAC  148

seq1  ATATATGAGGTTAGAATTTGGTTTGAAGTGTTTAGAAAAAAGAACACGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGAGGTTAGAATTTGGTTTGAAGTGTTTAGAAAAAAGAACACGAT  198

seq1  ATTTAAATCAGACAACCGGCTCTGAGAGTTAATGGAAACAGATGGGTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATCAGACAACCGGCTCTGAGAGTTAATGGAAACAGATGGGTAGC  248

seq1  AATTAGAGAACACGAAGCATGAAGCACTGCTGCAAATAGTTCCCGCCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAGAACACGAAGCATGAAGCACTGCTGCAAATAGTTCCCGCCTGG  298

seq1  AGGAGGACAGGACGAATGGAGAAAGACTGGAAAGAAGTCATTCTTCCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGACAGGACGAATGGAGAAAGACTGGAAAGAAGTCATTCTTCCAGC  348

seq1  TTATGCTCAGCCTTTTCTTCTAAGTGGAGAAGCAAAGGAGTTTAAAGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCTCAGCCTTTTCTTCTAAGTGGAGAAGCAAAGGAGTTTAAAGTGA  398

seq1  AGCAAAGCAACATAAGAGATGTGACCAGATGAACTTCACCACTCACTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGCAACATAAGAGATGTGACCAGATGAACTTCACCACTCACTGTG  448

seq1  ACACAAAGATCTACACAATTACTCTTGCTCTCTGGGCTTCCTCCCTCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAGATCTACACAATTACTCTTGCTCTCTGGGCTTCCTCCCTCCCT  498

seq1  CCTGCTCCACATCAAAATGTTCACATCTGTACCAAAAGTTGGGATTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCCACATCAAAATGTTCACATCTGTACCAAAAGTTGGGATTTTTT  548

seq1  TCTAGCTTTCTTCTTTATTTTTATTATATATATATATGATAATATTATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTTTCTTCTTTATTTTTATTATATATATATATGATAATATTATTA  598

seq1  ATATAGAATATTATATAATAATGTCACAATATTATATGTACTATTACAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAATATTATATAATAATGTCACAATATTATATGTACTATTACAAT  648

seq1  GTTTTAATGATCATTTTTGTCCCTATTTTTTGAGTGCCCCAAGTTTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAATGATCATTTTTGTCCCTATTTTTTGAGTGCCCCAAGTTTCTCT  698

seq1  CACAACTGCAATATCAATAGAGTAGAGGAAAGAAAATTTGTAAGGTAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACTGCAATATCAATAGAGTAGAGGAAAGAAAATTTGTAAGGTAGAA  748

seq1  AGGATTAGGTGGAGCATTGGCTTCTGAGTTTAATATCTACTACCTGCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTAGGTGGAGCATTGGCTTCTGAGTTTAATATCTACTACCTGCCTG  798

seq1  AGAAATTTAGAAGCTAAATAAAACAGAAAGACAAACTTCATTATGGTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTAGAAGCTAAATAAAACAGAAAGACAAACTTCATTATGGTTTA  848

seq1  CAGATTTACCGGCTATTTTATAAATCCAAATCAGCTAGGTGCAATGGGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTACCGGCTATTTTATAAATCCAAATCAGCTAGGTGCAATGGGGC  898

seq1  TCAGAACTGAACAAAGAATTC  921
      |||||||||||||||||||||
seq2  TCAGAACTGAACAAAGAATTC  919