BAC Information

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BAC

Clone NameB6Ng01-128N02
Chromosome2 (Build37)
Map Location 136,348,403 - 136,475,426
singlet/doubletdoublet
Overlap geneAnkrd5
Upstream geneLOC100043487, LOC100043786, LOC100043788, Plcb4, 6330527O06Rik, Pak7, LOC668910, LOC100043492, BC034902
Downstream geneSnap25, LOC668911, Mkks, 2210009G21Rik, Jag1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128N02.bB6Ng01-128N02.g
ACCDH930569DH930570
length1,2311,082
definitionDH930569|Mus musculus domesticus DNA, BAC clone: B6Ng01-128N02, 5' end.DH930570|Mus musculus domesticus DNA, BAC clone: B6Ng01-128N02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(136,348,403 - 136,349,647)(136,474,338 - 136,475,426)
sequence
gaattcaaatgaaagaaattattttctataattgcattaagttaatatac
tagattcatagctgagctttgccggatcaaaacattgaacatttaccata
caatcatgtaggatagtaaaagaaagtgggaaaaagagagttatcaatta
atatagacccatcttattttaagttaactataaactcggattgttacacc
aagaggaaacaagtgttacaaagtatgaaaatacagtgcttgaaatttat
ttatttaaaagtcttcactgagctgagaaatttcctcaaaaagattctaa
ttgtttatttgaatttttaatatactttaattattgcaaccagagagaag
caccagctaaaaatacattgagaaccaatacctaatgagcttgagatggg
caaatatttaatttgtttcagaaagatctaatttttaaacaatcttaatt
ttatactttttaaggtattatgcttatattttgggatctgttatagataa
atcatttaaagttgtaccaggtttgtttttggttttgttttttatttatt
tttttttgtttctcttttgttttgtctttttccatgggaattctaataag
agaaatgattttctacaattgcagttagttaacggttaatattaatttca
cagcctagctttgcctaatcaaaagattgtagatttactgtccagacatg
tagggtaggtaaagaataggaatcaatgaatataggccctttatattcca
ggtcaactctaatctctgcatggatattccaatcctatttatattataca
gcatacacacaatcaaggatttattgaagtaaatgagccaaatgaagatg
aatatttgatatataccaaaaaaggtcatttttttagtcattgagagact
tatctcaaaacggcttagaaatctgagaagtttcattggattctgggttc
actgaagatgcaagcccttgggatttgctctgtgagtttgggctggctca
ctttgtgctgaagctctcaaggaccagactatgtttgcacacttcctaag
gagatgtgacttgactatcccagcaaatcatggaaacttgtaacagagac
ctgaaccttagcggcgcagaactaagccaactgactccagatgaagtaca
ttcagctgttaattcagtatagacaacctcgctccgtgccgaaacttaaa
cgagctaatcatcacgactctgggaaagttt
gaattcacaggacacaggcacagacatgttcatagacacggaccatttcc
caacgttgaaggagaagacactgatgaagtatagggtgaagtatatggaa
gcagactgaacatctgggaggaacaaggaggctcagggttggccagcaac
tttagtccacttttttgacttggagagttggtgactcacattcagctggg
acaactcatggcacatattggttttacagttctgcaacttcatgaacatt
tcataagctctctcagtggccttgatattgctccctttttaccaccagat
ccatccttctgaattagaaatcagccagaaattggttctggaaggcccca
gctagctgtccctttgatgtctgatcctggggtggatgaggtatatggct
ggatgctttcttagaagcttcctatgatgctttatcgtcaggctgttcca
cctccaggtgttatttctaaccccattcagctagactttaaagagaagct
gtacagttggtagggtttactaacctgagacctgagttccactgattaat
agacatctaggctaggagactgcatgtgggctcaaaatcaaggggaaaca
tttggatctccaggacaagtaggacagtctaaaacctggagctgagtctg
aaaggagcagagagcaacaatgaagccacggtgtcctcagaccgtgcagg
gacaaaatgagttgtacctgtctcgagttactgcactggttttccagcca
gctctgcagcctgactgctttttactgcagagcctgtgccctccaggtgc
aggtggccattgatgccccacaggccccagtaaaggtgtgccaggaagcc
ttcttttctctgcagtgaggacctgggccagctctgggctggctgccaac
agctgcttgcagactgagtcacagcacagacctctcggctgcagtcaagg
aagacagacagcaaactgtgatgggcatgtctctttgctttacttgcctc
tttccatagctcctctgatcttcacgcggatgtaaggctcctgtttccat
ttggtagattcccatccctttagagtatttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_136348403_136349647
seq2: B6Ng01-128N02.b_49_1279

seq1  GAATTCAAATGAAAGAAATTATTTTCTATAATTGCATTAAGTTAATATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATGAAAGAAATTATTTTCTATAATTGCATTAAGTTAATATAC  50

seq1  TAGATTCATAGCTGAGCTTTGCCGGATCAAAACATTGAACATTTACCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTCATAGCTGAGCTTTGCCGGATCAAAACATTGAACATTTACCATA  100

seq1  CAATCATGTAGGATAGTAAAAGAAAGTGGGAAAAAGAGAGTTATCAATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATGTAGGATAGTAAAAGAAAGTGGGAAAAAGAGAGTTATCAATTA  150

seq1  ATATAGACCCATCTTATTTTAAGTTAACTATAAACTCGGATTGTTACACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGACCCATCTTATTTTAAGTTAACTATAAACTCGGATTGTTACACC  200

seq1  AAGAGGAAACAAGTGTTACAAAGTATGAAAATACAGTGCTTGAAATTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAAACAAGTGTTACAAAGTATGAAAATACAGTGCTTGAAATTTAT  250

seq1  TTATTTAAAAGTCTTCACTGAGCTGAGAAATTTCCTCAAAAAGATTCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAAAAGTCTTCACTGAGCTGAGAAATTTCCTCAAAAAGATTCTAA  300

seq1  TTGTTTATTTGAATTTTTAATATACTTTAATTATTGCAACCAGAGAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTATTTGAATTTTTAATATACTTTAATTATTGCAACCAGAGAGAAG  350

seq1  CACCAGCTAAAAATACATTGAGAACCAATACCTAATGAGCTTGAGATGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGCTAAAAATACATTGAGAACCAATACCTAATGAGCTTGAGATGGG  400

seq1  CAAATATTTAATTTGTTTCAGAAAGATCTAATTTTTAAACAATCTTAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATTTAATTTGTTTCAGAAAGATCTAATTTTTAAACAATCTTAATT  450

seq1  TTATACTTTTTAAGGTATTATGCTTATATTTTGGGATCTGTTATAGATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACTTTTTAAGGTATTATGCTTATATTTTGGGATCTGTTATAGATAA  500

seq1  ATCATTTAAAGTTGTACCAGGTTTGTTTTTGGTTTTGTTTTTTATTTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTAAAGTTGTACCAGGTTTGTTTTTGGTTTTGTTTTTTATTTATT  550

seq1  TTTTTTTGTTTCTCTTTTGTTTTGTCTTTTTCCATGGGAATTCTAATAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGTTTCTCTTTTGTTTTGTCTTTTTCCATGGGAATTCTAATAAG  600

seq1  AGAAATGATTTTCTACAATTGCAGTTAGTTAACGGTTAATATTAATTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGATTTTCTACAATTGCAGTTAGTTAACGGTTAATATTAATTTCA  650

seq1  CAGCCTAGCTTTGCCTAATCAAAAGATTGTAGATTTACTGTCCAGACATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTAGCTTTGCCTAATCAAAAGATTGTAGATTTACTGTCCAGACATG  700

seq1  TAGGGTAGGTAAAGAATAGGAATCAATGAATATAGGCCCTTTATATTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTAGGTAAAGAATAGGAATCAATGAATATAGGCCCTTTATATTCCA  750

seq1  GGTCAACTCTAATCTCTGCATGGATATTCCAATCCTATTTATATTATACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAACTCTAATCTCTGCATGGATATTCCAATCCTATTTATATTATACA  800

seq1  GCATACACACAATCAAGGATTTATTGAAGTAAATGAGCCAAATGAAGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACACACAATCAAGGATTTATTGAAGTAAATGAGCCAAATGAAGATG  850

seq1  AATATTTGATATAATACCAAAAAAGGTCATTTTTTTAGTCATTGAGAGAC  900
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AATATTTGATAT-ATACCAAAAAAGGTCATTTTTTTAGTCATTGAGAGAC  899

seq1  TTATCTCAAAACGGCTTAGAAATCTGAG-AGTTTCATTTGATTCT-GGTT  948
      |||||||||||||||||||||||||||| ||||||||| |||||| ||||
seq2  TTATCTCAAAACGGCTTAGAAATCTGAGAAGTTTCATTGGATTCTGGGTT  949

seq1  CACTGAAGATGCAAGCCCTTGGGATTTGCTCTGTGGAGTTTGGGCTGGCT  998
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CACTGAAGATGCAAGCCCTTGGGATTTGCTCTGT-GAGTTTGGGCTGGCT  998

seq1  CACTTTTGTGCTGAAGCTCTC-AGGACCAGACTATGTTTGCACACTTCCT  1047
      ||| ||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CAC-TTTGTGCTGAAGCTCTCAAGGACCAGACTATGTTTGCACACTTCCT  1047

seq1  AAGGAGATGTGACCTGGACTATCCCAGCCAAATCATGGAAACATTGTAAC  1097
      |||||||||||| || ||||||||||| |||||||||||||| |||||||
seq2  AAGGAGATGTGA-CTTGACTATCCCAG-CAAATCATGGAAAC-TTGTAAC  1094

seq1  AGAGACCCAGACCTTAGCCGGCCAGCAGACCTTAGCACAACTGACTCCAT  1147
      |||||||   ||||||| ||||  ||||| || ||| |||||||||||| 
seq2  AGAGACCTGAACCTTAG-CGGC--GCAGAACTAAGC-CAACTGACTCCA-  1139

seq1  GATGGAAGTACCATTCAAGCTGTAAAATTCAGGGAGTAGACAACC---CC  1194
      ||| |||||| ||||| ||||||  ||||||  |  |||||||||   | 
seq2  GAT-GAAGTA-CATTC-AGCTGT-TAATTCA--GTATAGACAACCTCGCT  1183

seq1  ACCTGCCAAAACTAAAACAGAGGCCTAATCCATACAGTTCTGGGAAAGTT  1244
       | |||| ||||| |||| |||  ||||||   ||   ||||||||||||
seq2  CCGTGCCGAAACTTAAAC-GAG--CTAATCATCACGACTCTGGGAAAGTT  1230

seq1  T  1245
      |
seq2  T  1231

seq1: chr2_136474338_136475426
seq2: B6Ng01-128N02.g_68_1149 (reverse)

seq1  GTAAATACTCTAAAGGGATTGGGAATCTACACAAATGGAACCAGGAGCCC  50
      |||||||||||||||||| ||||||||||| ||||||||| |||||||| 
seq2  GTAAATACTCTAAAGGGA-TGGGAATCTAC-CAAATGGAAACAGGAGCCT  48

seq1  TACAT-CGCGTGAAAGATCAGAGGAGCTATGGAAAGAGGGCAAGTAAAAG  99
      ||||| |||||| |||||||||||||||||||||||| ||||||| ||||
seq2  TACATCCGCGTG-AAGATCAGAGGAGCTATGGAAAGA-GGCAAGT-AAAG  95

seq1  CAAAGAGACATTGCCCATCACAGTTTGCTGTCTGTTCCTTCCTTGACTGC  149
      |||||||||| ||||||||||||||||||||||||  |||||||||||||
seq2  CAAAGAGACA-TGCCCATCACAGTTTGCTGTCTGT--CTTCCTTGACTGC  142

seq1  AGCCGAGAGGTCTGTGCTGTGACTCAGTCTGCAAGCAGCTGTTGGCAGCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGAGAGGTCTGTGCTGTGACTCAGTCTGCAAGCAGCTGTTGGCAGCC  192

seq1  AGCCCAGAGCTGGCCCAGGTCCTCACTGCAGAGAAAAGAAGGCTTCCTGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGAGCTGGCCCAGGTCCTCACTGCAGAGAAAAGAAGGCTTCCTGG  242

seq1  CACACCTTTACTGGGGCCTGTGGGGCATCAATGGCCACCTGCACCTGGAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCTTTACTGGGGCCTGTGGGGCATCAATGGCCACCTGCACCTGGAG  292

seq1  GGCACAGGCTCTGCAGTAAAAAGCAGTCAGGCTGCAGAGCTGGCTGGAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGGCTCTGCAGTAAAAAGCAGTCAGGCTGCAGAGCTGGCTGGAAA  342

seq1  ACCAGTGCAGTAACTCGAGACAGGTACAACTCATTTTGTCCCTGCACGGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTGCAGTAACTCGAGACAGGTACAACTCATTTTGTCCCTGCACGGT  392

seq1  CTGAGGACACCGTGGCTTCATTGTTGCTCTCTGCTCCTTTCAGACTCAGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGACACCGTGGCTTCATTGTTGCTCTCTGCTCCTTTCAGACTCAGC  442

seq1  TCCAGGTTTTAGACTGTCCTACTTGTCCTGGAGATCCAAATGTTTCCCCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTTTTAGACTGTCCTACTTGTCCTGGAGATCCAAATGTTTCCCCT  492

seq1  TGATTTTGAGCCCACATGCAGTCTCCTAGCCTAGATGTCTATTAATCAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTGAGCCCACATGCAGTCTCCTAGCCTAGATGTCTATTAATCAGT  542

seq1  GGAACTCAGGTCTCAGGTTAGTAAACCCTACCAACTGTACAGCTTCTCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTCAGGTCTCAGGTTAGTAAACCCTACCAACTGTACAGCTTCTCTT  592

seq1  TAAAGTCTAGCTGAATGGGGTTAGAAATAACACCTGGAGGTGGAACAGCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTCTAGCTGAATGGGGTTAGAAATAACACCTGGAGGTGGAACAGCC  642

seq1  TGACGATAAAGCATCATAGGAAGCTTCTAAGAAAGCATCCAGCCATATAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGATAAAGCATCATAGGAAGCTTCTAAGAAAGCATCCAGCCATATAC  692

seq1  CTCATCCACCCCAGGATCAGACATCAAAGGGACAGCTAGCTGGGGCCTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCCACCCCAGGATCAGACATCAAAGGGACAGCTAGCTGGGGCCTTC  742

seq1  CAGAACCAATTTCTGGCTGATTTCTAATTCAGAAGGATGGATCTGGTGGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCAATTTCTGGCTGATTTCTAATTCAGAAGGATGGATCTGGTGGT  792

seq1  AAAAAGGGAGCAATATCAAGGCCACTGAGAGAGCTTATGAAATGTTCATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGGAGCAATATCAAGGCCACTGAGAGAGCTTATGAAATGTTCATG  842

seq1  AAGTTGCAGAACTGTAAAACCAATATGTGCCATGAGTTGTCCCAGCTGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGCAGAACTGTAAAACCAATATGTGCCATGAGTTGTCCCAGCTGAA  892

seq1  TGTGAGTCACCAACTCTCCAAGTCAAAAAAGTGGACTAAAGTTGCTGGCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTCACCAACTCTCCAAGTCAAAAAAGTGGACTAAAGTTGCTGGCC  942

seq1  AACCCTGAGCCTCCTTGTTCCTCCCAGATGTTCAGTCTGCTTCCATATAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGAGCCTCCTTGTTCCTCCCAGATGTTCAGTCTGCTTCCATATAC  992

seq1  TTCACCCTATACTTCATCAGTGTCTTCTCCTTCAACGTTGGGAAATGGTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCCTATACTTCATCAGTGTCTTCTCCTTCAACGTTGGGAAATGGTC  1042

seq1  CGTGTCTATGAACATGTCTGTGCCTGTGTCCTGTGAATTC  1089
      ||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTCTATGAACATGTCTGTGCCTGTGTCCTGTGAATTC  1082