BAC Information

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BAC

Clone NameB6Ng01-128N09
Chromosome2 (Build37)
Map Location 31,947,136 - 32,118,517
singlet/doubletdoublet
Overlap genePpapdc3, 5830434P21Rik, Pomt1, Uck1
Upstream geneFnbp1, Gpr107, Freq, LOC622345, LOC670182, LOC665700, BC034076, Ass1, Fubp3, LOC100041465, Prdm12, Exosc2, Abl1, BC094274, Fibcd1, Lamc3, 2810003C17Rik, Nup214, A130092J06Rik, LOC100040058
Downstream geneLOC622534, 2900010J23Rik, Golga2, Dnm1, Ciz1, 1110008P14Rik, Lcn2, Ptges2, LOC100041671, Slc25a25, 4933440H19Rik, C230093N12Rik, Dpm2, Pip5kl1, St6galnac4, St6galnac6, Ak1, Eng, Fpgs, Cdk9, Sh2d3c, Tor2a, Ttc16, Ptrh1, 1700019L03Rik, Stxbp1, 9130404D14Rik, Lrsam1, Snora65, Slc2a8, Garnl3, Ralgps1, Angptl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128N09.bB6Ng01-128N09.g
ACCDH930581DH930582
length965889
definitionDH930581|Mus musculus domesticus DNA, BAC clone: B6Ng01-128N09, 5' end.DH930582|Mus musculus domesticus DNA, BAC clone: B6Ng01-128N09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,947,136 - 31,948,094)(32,117,629 - 32,118,517)
sequence
gaattcaaggccagcctggtcaagacagccagagctaccctgtttcaaaa
acaaacaaacaaacaagcaaaagttcttggtgatattttcttgtcttttt
ttctagttcattctttcgaggatctgtgtcctgactcttcagctaaatgg
ctggaaaaaagcattgtctgaataaatgacagaatgccaagactcaggag
aaattgcattgtgtggcctggtaggtgcttgtaagagtttatggattaga
agtaaccagagatctcccagcagacagaggagtagcaggttctggtccca
gggaaatagcagagtcccttgtgctgagtgaaccttttcagggttctggg
tagatgaaaaggtttgcttgtggtcattggctaagccaaggattgaacct
gggtcagttgctctccacagtccgttttaaccactgacaggctctggagc
taaattggaccccgtggcctctgcagaacttaactggacactccagacag
aataaagtgctgacacagtcctgggtattaatagtcctagcttcctgggc
tccccaggccctgctgaagccagcccaggtcatggccccaccctggaggg
taaggtgactttcctggcagagaattgatcaaacatttccaggccccccg
tggactgaagaatctgagcccaaaggctccagtgtccccatactggagac
tacttagcagtctgagtcttgcttctttttcagttcctgactggatacct
tcacttctctgagcctcacttttcagtatactgactgaaagccacacatt
tggcactccccctcagggcatagggtctacctgtacaattgtccattata
ttggtaaatttttcacattgttccagttacctgaagctggtgtttggaag
gaggataccccttctctgtttcagattctaagtatggttgtttcaaattt
tcctccaaacccctt
gaattcatcacccaaaggcatctgatttggttgcttcccaagaagtcttc
tagaccctggttgactgtcttccctccctggagttgaccccttcctccct
gacatccgcaaacttgcctagctggtttgccaggcagaagctgggcctgt
tttgtcatctttgggatcttctggattctgattcatcaggaacaccaata
ctggaagagtcagaggcgacaccactgagaggagagatcaggcaggagcc
tgactttgattgcagcctgctctgctgaccattaaggagctggaaggccc
caaagctgtcccatcacacccatctcaccatggtcctcaccctgcagtgc
ttgtctcagctccacccactgccccagcgttctcatctccaatgcttgtc
cacccccccccccccccccggttatctggccttaggataggattgggctg
agcgaaggtggtagaggaaacttggtgctcataagatgttggtggattga
gtttgtttgcttttctgggttttgttgttgttgtttgctttgttttgttc
tgttttgttttgtttttgagatagggtttcctttatacatctagttggat
tcaaactcggagtcctgccccagcctcccaagtacaggaattacaggtat
gcaccaccattacagttatgatggtcagccttcattatcaactggagtac
atttaggatccatggaaacacctgtagatgtctacagtggtttgaaaatg
attggtctagggagaggcactactaggaagtatggtcttgttgggaggaa
gtgtgtcattatgggggtggctttgagaccctcctcctaacccatagcat
ccagtctactactgtcttcctttgggtgaaggtgtagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_31947136_31948094
seq2: B6Ng01-128N09.b_49_1013

seq1  GAATTCAAGGCCAGCCTGGTCAAGACAGCCAGAGCTACCCTGTTTCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCCAGCCTGGTCAAGACAGCCAGAGCTACCCTGTTTCAAAA  50

seq1  ACAAACAAACAAACAAGCAAAAGTTCTTGGTGATATTTTCTTGTCTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAACAAACAAGCAAAAGTTCTTGGTGATATTTTCTTGTCTTTTT  100

seq1  TTCTAGTTCATTCTTTCGAGGATCTGTGTCCTGACTCTTCAGCTAAATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTTCATTCTTTCGAGGATCTGTGTCCTGACTCTTCAGCTAAATGG  150

seq1  CTGGAAAAAAGCATTGTCTGAATAAATGACAGAATGCCAAGACTCAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAAAAGCATTGTCTGAATAAATGACAGAATGCCAAGACTCAGGAG  200

seq1  AAATTGCATTGTGTGGCCTGGTAGGTGCTTGTAAGAGTTTATGGATTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCATTGTGTGGCCTGGTAGGTGCTTGTAAGAGTTTATGGATTAGA  250

seq1  AGTAACCAGAGATCTCCCAGCAGACAGAGGAGTAGCAGGTTCTGGTCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACCAGAGATCTCCCAGCAGACAGAGGAGTAGCAGGTTCTGGTCCCA  300

seq1  GGGAAATAGCAGAGTCCCTTGTGCTGAGTGAACCTTTTCAGGGTTCTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATAGCAGAGTCCCTTGTGCTGAGTGAACCTTTTCAGGGTTCTGGG  350

seq1  TAGATGAAAAGGTTTGCTTGTGGTCATTGGCTAAGCCAAGGATTGAACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGAAAAGGTTTGCTTGTGGTCATTGGCTAAGCCAAGGATTGAACCT  400

seq1  GGGTCAGTTGCTCTCCACAGTCCGTTTTAACCACTGACAGGCTCTGGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCAGTTGCTCTCCACAGTCCGTTTTAACCACTGACAGGCTCTGGAGC  450

seq1  TAAATTGGACCCCGTGGCCTCTGCAGAACTTAACTGGACACTCCAGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGGACCCCGTGGCCTCTGCAGAACTTAACTGGACACTCCAGACAG  500

seq1  AATAAAGTGCTGACACAGTCCTGGGTATTAATAGTCCTAGCTTCCTGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGTGCTGACACAGTCCTGGGTATTAATAGTCCTAGCTTCCTGGGC  550

seq1  TCCCCAGGCCCTGCTGAAGCCAGCCCAGGTCATGGCCCCACCCTGGAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGGCCCTGCTGAAGCCAGCCCAGGTCATGGCCCCACCCTGGAGGG  600

seq1  TAAGGTGACTTTCCTGGCAGAGAATTGATCAAACATTTCCAGGCCCCCCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTGACTTTCCTGGCAGAGAATTGATCAAACATTTCCAGGCCCCCCG  650

seq1  TGGACTGAAGAATCTGAGCCCAAAGGCTCCAGTGTCCCCATACTGGAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGAAGAATCTGAGCCCAAAGGCTCCAGTGTCCCCATACTGGAGAC  700

seq1  TACTTAGCAGTCTGAGTCTTGCTTC-TTTTCAGTTCCTGACTGGATACCT  749
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TACTTAGCAGTCTGAGTCTTGCTTCTTTTTCAGTTCCTGACTGGATACCT  750

seq1  TCACTTCTCTGAGCCTCAC-TTTCAGTATACTGACTGAAAGCCACACATT  798
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCACTTCTCTGAGCCTCACTTTTCAGTATACTGACTGAAAGCCACACATT  800

seq1  TGGCACTCCCCCTCAGGGCATAGGGTCTACCTGTACAA-TGTCCATTATA  847
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGGCACTCCCCCTCAGGGCATAGGGTCTACCTGTACAATTGTCCATTATA  850

seq1  TTGGTAAA-TTTTCACATTGTTCCAGTTACCTGAAGCTGGTG-TTGGAAG  895
      |||||||| ||||||||||||||||||||||||||||||||| |||||||
seq2  TTGGTAAATTTTTCACATTGTTCCAGTTACCTGAAGCTGGTGTTTGGAAG  900

seq1  GAGGATACCCCTTCTCTGTTTCAGA-TCTAAGTATGTTTGTTTCAAATTT  944
      ||||||||||||||||||||||||| |||||||||| |||||||||||||
seq2  GAGGATACCCCTTCTCTGTTTCAGATTCTAAGTATGGTTGTTTCAAATTT  950

seq1  TCCTCCAAACCCCTT  959
      |||||||||||||||
seq2  TCCTCCAAACCCCTT  965

seq1: chr2_32117629_32118517
seq2: B6Ng01-128N09.g_66_954 (reverse)

seq1  TTCTACACCTTCAACCAAAGGAAGCCAGTAGTAGACTGGCTGCTATGGGG  50
      ||||||||||||| |||||||||| |||||||||||||| |||||| |||
seq2  TTCTACACCTTCACCCAAAGGAAGACAGTAGTAGACTGGATGCTAT-GGG  49

seq1  TTAGGAGGAGGGTCTCAAAGCCTACCCCCATAATGACACACTTCCT-CCA  99
      |||||||||||||||||||||| ||||||||||||||||||||||| |||
seq2  TTAGGAGGAGGGTCTCAAAGCC-ACCCCCATAATGACACACTTCCTCCCA  98

seq1  ACAAGACCATACTTCCTAGTAGTGCCTCTCCCTAGACCAATCATTTTCAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGACCATACTTCCTAGTAGTGCCTCTCCCTAGACCAATCATTTTCAA  148

seq1  ACCACTGTAGACATCTACAGGTGTTTCCATGGATCCTAAATGTACTCCAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTGTAGACATCTACAGGTGTTTCCATGGATCCTAAATGTACTCCAG  198

seq1  TTGATAATGAAGGCTGACCATCATAACTGTAATGGTGGTGCATACCTGTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAATGAAGGCTGACCATCATAACTGTAATGGTGGTGCATACCTGTA  248

seq1  ATTCCTGTACTTGGGAGGCTGGGGCAGGACTCCGAGTTTGAATCCAACTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGTACTTGGGAGGCTGGGGCAGGACTCCGAGTTTGAATCCAACTA  298

seq1  GATGTAT-AAGGAAACCCTATCTCAAAAACAAAACAAAACAGAACAAAAC  348
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTATAAAGGAAACCCTATCTCAAAAACAAAACAAAACAGAACAAAAC  348

seq1  AAAGCAAACAACAACAACAAAACCCAGAAAAGCAAACAAACTCAATCCAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAACAACAACAACAAAACCCAGAAAAGCAAACAAACTCAATCCAC  398

seq1  CAACATCTTATGAGCACCAAGTTTCCTCTACCACCTTCGCTCAGCCCAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATCTTATGAGCACCAAGTTTCCTCTACCACCTTCGCTCAGCCCAAT  448

seq1  CCTATCCTAAGGCCAGATAACCGGGGGGGGGGGGGGGGGTGGACAAGCAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCCTAAGGCCAGATAACCGGGGGGGGGGGGGGGGGTGGACAAGCAT  498

seq1  TGGAGATGAGAACGCTGGGGCAGTGGGTGGAGCTGAGACAAGCACTGCAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATGAGAACGCTGGGGCAGTGGGTGGAGCTGAGACAAGCACTGCAG  548

seq1  GGTGAGGACCATGGTGAGATGGGTGTGATGGGACAGCTTTGGGGCCTTCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGGACCATGGTGAGATGGGTGTGATGGGACAGCTTTGGGGCCTTCC  598

seq1  AGCTCCTTAATGGTCAGCAGAGCAGGCTGCAATCAAAGTCAGGCTCCTGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTTAATGGTCAGCAGAGCAGGCTGCAATCAAAGTCAGGCTCCTGC  648

seq1  CTGATCTCTCCTCTCAGTGGTGTCGCCTCTGACTCTTCCAGTATTGGTGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTCTCCTCTCAGTGGTGTCGCCTCTGACTCTTCCAGTATTGGTGT  698

seq1  TCCTGATGAATCAGAATCCAGAAGATCCCAAAGATGACAAAACAGGCCCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGATGAATCAGAATCCAGAAGATCCCAAAGATGACAAAACAGGCCCA  748

seq1  GCTTCTGCCTGGCAAACCAGCTAGGCAAGTTTGCGGATGTCAGGGAGGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGCCTGGCAAACCAGCTAGGCAAGTTTGCGGATGTCAGGGAGGAA  798

seq1  GGGGTCAACTCCAGGGAGGGAAGACAGTCAACCAGGGTCTAGAAGACTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCAACTCCAGGGAGGGAAGACAGTCAACCAGGGTCTAGAAGACTTC  848

seq1  TTGGGAAGCAACCAAATCAGATGCCTTTGGGTGATGAATTC  889
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAGCAACCAAATCAGATGCCTTTGGGTGATGAATTC  889