BAC Information

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BAC

Clone NameB6Ng01-128P24
Chromosome2 (Build37)
Map Location 127,410,746 - 127,563,193
singlet/doubletdoublet
Overlap geneMrps5, Mal, LOC668892, Mall
Upstream geneSlc27a2, Hdc, Gabpb1, Usp8, LOC100043714, Usp50, Trpm7, 2010106G01Rik, Ap4e1, Blvra, Ncaph, 1700041B20Rik, 1810024B03Rik, LOC100043408, Ascc3l1, Ciao1, Tmem127, ENSMUSG00000074822, Stard7, Dusp2, Astl, Adra2b, A530057A03Rik, Fahd2a, Kcnip3, Prom2, Zfp661
Downstream geneNphp1, 1500011K16Rik, Bub1, Acoxl, Bcl2l11, LOC100043424, LOC100043729, LOC383791, LOC100043730, Gm355, Anapc1, Mertk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128P24.bB6Ng01-128P24.g
ACCDH930700DH930701
length597956
definitionDH930700|Mus musculus domesticus DNA, BAC clone: B6Ng01-128P24, 5' end.DH930701|Mus musculus domesticus DNA, BAC clone: B6Ng01-128P24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,562,598 - 127,563,193)(127,410,746 - 127,411,677)
sequence
gaattctcctacttctgcctcccaactcatgagtgctggcattacagatg
catagtgggtcctggggatctgaacccaggtccttacactttcccagcaa
gccctttaccaactgaatggtttccccagctcctcttgtcactgctctca
tattctacttgtctgcgggaggtccctatctctgggtgcttgagataatg
ttaaagggcagtgaatctcaggcttcagcgattctctggtccagtgtcct
cctgtgaagtctgtgggtgagcattcccacacccagggcagccttgcctg
cccatctcgggagcatcttggaaagccattatctctaccaaggaagaaag
gaggcaaaggtgtcatcttcaagggaaggctttgtcagcctgcagtgtgg
taggatatccgttgcagggtccccacacttcctcttgtgtagagtattcc
caaggcagaggagttctctggcagaggcaatgatcagacctggttgttgg
ctcactgtaatgtattctgtttcctcaattcaaagaggtggggactgaac
tgcacttccttagtttgtctgcacatttgaggggtgtcaccttgtat
tggtgtaggtttaatcccagatttggtagcatgtcggagaatttacaccc
aactctgtagctgtaatcctgaatgagggtgaccttctacctactgcttc
agaggataccagccaaacaacagactttaaacgttgtagctcagtccatt
ccccaccccacccccctctctctgtgtcctgaactcactatgtaaaccag
gatggcttcaaacttggagatccacctgtctctgcctccaaagacctggg
ctttaaggtgtgcatcaccccacctggcctctttgtatctcaaaagctca
aaaaggctacaaaacttcaaaaaggaagcaaaacttctagggaaaattct
caatttgtgaggcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaggcaacc
ttcatttggtactatgagatctggatttgccccctctctgaaccaaaaga
caggttttggcttttctggaattaactggatactgcagaatatgaattac
aatatttaaagaaatagccaggccagtcatgagaaattaaatgagggtcc
caagcccataccatttgtaattgagggattaaggaacactctttttgata
ggcttaagaaagctccagcactggggacttccaaagggatgggctgtttt
caactatacattacccaaaaagcagggctgatacccatttctcatctggc
cattgggggggtccacaaattggttataccatacctgtctgaacaactgg
gatcctggaaccccaagatgaccccagtatcctccagggactgacaatga
ctctttgaatttcccattactatctgtacaccccttccttaaaaccttga
tctcctttgggctatccaattaacctcttccattaatcattttttcctta
atagaaccttagaattggttaaaagaaagtaaatttttcctactgagtaa
tatacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_127562598_127563193
seq2: B6Ng01-128P24.b_44_640 (reverse)

seq1  ATACACGGTGACACCCCTCAGATGTGCAGGC-AACTAAGGAAGTGCAGTT  49
      ||||| |||||||||||||| |||||||| | ||||||||||||||||||
seq2  ATACAAGGTGACACCCCTCAAATGTGCAGACAAACTAAGGAAGTGCAGTT  50

seq1  CTGTCCCCACCTCTTTGAATTGAGGAAACAGAATACATTGCAGTGAGCCA  99
      | ||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CAGTCCCCACCTCTTTGAATTGAGGAAACAGAATACATTACAGTGAGCCA  100

seq1  ACAACCAGGTCTGATCATTGCCTCTGCCAGAGAACTCCTCTGCCTTGGGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCAGGTCTGATCATTGCCTCTGCCAGAGAACTCCTCTGCCTTGGGA  150

seq1  ATACTCTACACAAGAGGAAGTGTGGGGACCCTGCAACGGATATCCTACCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTACACAAGAGGAAGTGTGGGGACCCTGCAACGGATATCCTACCA  200

seq1  CACTGCAGGCTGACAAAGCCTTCCCTTGAAGATGACACCTTTGCCTCCTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCAGGCTGACAAAGCCTTCCCTTGAAGATGACACCTTTGCCTCCTT  250

seq1  TCTTCCTTGGTAGAGATAATGGCTTTCCAAGATGCTCCCGAGATGGGCAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTGGTAGAGATAATGGCTTTCCAAGATGCTCCCGAGATGGGCAG  300

seq1  GCAAGGCTGCCCTGGGTGTGGGAATGCTCACCCACAGACTTCACAGGAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGCTGCCCTGGGTGTGGGAATGCTCACCCACAGACTTCACAGGAGG  350

seq1  ACACTGGACCAGAGAATCGCTGAAGCCTGAGATTCACTGCCCTTTAACAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGACCAGAGAATCGCTGAAGCCTGAGATTCACTGCCCTTTAACAT  400

seq1  TATCTCAAGCACCCAGAGATAGGGACCTCCCGCAGACAAGTAGAATATGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCAAGCACCCAGAGATAGGGACCTCCCGCAGACAAGTAGAATATGA  450

seq1  GAGCAGTGACAAGAGGAGCTGGGGAAACCATTCAGTTGGTAAAGGGCTTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTGACAAGAGGAGCTGGGGAAACCATTCAGTTGGTAAAGGGCTTG  500

seq1  CTGGGAAAGTGTAAGGACCTGGGTTCAGATCCCCAGGACCCACTATGCAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAAGTGTAAGGACCTGGGTTCAGATCCCCAGGACCCACTATGCAT  550

seq1  CTGTAATGCCAGCACTCCTGAGTTGGGAGGCAGAAGTAGGAGAATTC  596
      ||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTGTAATGCCAGCACTCATGAGTTGGGAGGCAGAAGTAGGAGAATTC  597

seq1: chr2_127410746_127411677
seq2: B6Ng01-128P24.g_76_1031

seq1  TGGTGTAGGTTTAATCCCAGATTTGGTAGCATGTCGGAGAATTTACACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTAGGTTTAATCCCAGATTTGGTAGCATGTCGGAGAATTTACACCC  50

seq1  AACTCTGTAGCTGTAATCCTGAATGAGGGTGACCTTCTACCTACTGCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGTAGCTGTAATCCTGAATGAGGGTGACCTTCTACCTACTGCTTC  100

seq1  AGAGGATACCAGCCAAACAACAGACTTTAAACGTTGTAGCTCAGTCCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGATACCAGCCAAACAACAGACTTTAAACGTTGTAGCTCAGTCCATT  150

seq1  CCCCACCCCACCCCCCTCTCTCTGTGTCCTGAACTCACTATGTAAACCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCCCACCCCCCTCTCTCTGTGTCCTGAACTCACTATGTAAACCAG  200

seq1  GATGGCTTCAAACTTGGAGATCCACCTGTCTCTGCCTCCAAAGACCTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTTCAAACTTGGAGATCCACCTGTCTCTGCCTCCAAAGACCTGGG  250

seq1  CTTTAAGGTGTGCATCACCCCACCTGGCCTCTTTGTATCTCAAAAGCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGGTGTGCATCACCCCACCTGGCCTCTTTGTATCTCAAAAGCTCA  300

seq1  AAAAGGCTACAAAACTTCAAAAAGGAAGCAAAACTTCTAGGGAAAATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCTACAAAACTTCAAAAAGGAAGCAAAACTTCTAGGGAAAATTCT  350

seq1  CAATTTGTGAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGTGAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCAACC  400

seq1  TTCATTTGGTACTATGAGATCTGGATTTGCCCCCTCTCTGAACCAAAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTGGTACTATGAGATCTGGATTTGCCCCCTCTCTGAACCAAAAGA  450

seq1  CAGGTTTTGGCTTTTCTGGAATTAACTGGATACTGCAGAATATGAATTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTTGGCTTTTCTGGAATTAACTGGATACTGCAGAATATGAATTAC  500

seq1  AATATTTAAAGAAATAGCCAGGCCAGTCATGAGAAATTAAATGAGGGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTAAAGAAATAGCCAGGCCAGTCATGAGAAATTAAATGAGGGTCC  550

seq1  CAAGCCCATACCATTTGTAATTGAGGGATTAAGGAACACTC-TTTTGATA  599
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CAAGCCCATACCATTTGTAATTGAGGGATTAAGGAACACTCTTTTTGATA  600

seq1  GGCTTAAGAAAGCTCCAGCACT-GGGACTTCCAAAGGGATGGGCTG-TTT  647
      |||||||||||||||||||||| ||||||||||||||||||||||| |||
seq2  GGCTTAAGAAAGCTCCAGCACTGGGGACTTCCAAAGGGATGGGCTGTTTT  650

seq1  CAACTATACATTA-CCAAAAAGCAGGGCTGATACCCA-TTCTCATCTGGC  695
      ||||||||||||| ||||||||||||||||||||||| ||||||||||||
seq2  CAACTATACATTACCCAAAAAGCAGGGCTGATACCCATTTCTCATCTGGC  700

seq1  CATTGGGTGG--TCACAAA-TGGTCATACCATACCTGTCTGAACAACT-G  741
      ||||||| ||   |||||| |||| ||||||||||||||||||||||| |
seq2  CATTGGGGGGGTCCACAAATTGGTTATACCATACCTGTCTGAACAACTGG  750

seq1  GATCCT-GAAACCCAAGATGACCCCAGTAT-CTCCAGGGACTGACAATGA  789
      |||||| ||| ||||||||||||||||||| |||||||||||||||||||
seq2  GATCCTGGAACCCCAAGATGACCCCAGTATCCTCCAGGGACTGACAATGA  800

seq1  CTCTTTG-ATCTCCCATTACTATCTGTACA-CCCTTCC-TAAAACCTTGA  836
      ||||||| || ||||||||||||||||||| ||||||| |||||||||||
seq2  CTCTTTGAATTTCCCATTACTATCTGTACACCCCTTCCTTAAAACCTTGA  850

seq1  TCTC--TTTGGCTATCAATTAAACCTCTCCAAT--ATCAGTTTTTCTTAA  882
      ||||  || ||||||| | | ||||||| | ||  |||| |||||| | |
seq2  TCTCCTTTGGGCTATCCAATTAACCTCTTCCATTAATCATTTTTTCCTTA  900

seq1  ATAGAACC-TAGAATTGGT--AAAG-AAGTAAATTTTT-CTACTGAGTAA  927
      |||||||| ||||||||||  |||| |||||||||||| |||||||||||
seq2  ATAGAACCTTAGAATTGGTTAAAAGAAAGTAAATTTTTCCTACTGAGTAA  950

seq1  -ATACC  932
       |||||
seq2  TATACC  956