BAC Information

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BAC

Clone NameB6Ng01-129G21
Chromosome2 (Build37)
Map Location 20,316,102 - 20,472,032
singlet/doubletdoublet
Overlap geneEtl4
Upstream geneMsrb2, LOC100041196, Ptf1a, LOC100041534, 4921504E06Rik, LOC100041244, Otud1, LOC667564, LOC100041302, LOC433406, LOC654360, LOC667609
Downstream geneArhgap21, LOC433408, LOC675912, C130046B21Rik, 4933434I06Rik, Thnsl1, Gpr158
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129G21.bB6Ng01-129G21.g
ACCDH931014DH931015
length9161,077
definitionDH931014|Mus musculus domesticus DNA, BAC clone: B6Ng01-129G21, 5' end.DH931015|Mus musculus domesticus DNA, BAC clone: B6Ng01-129G21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(20,316,102 - 20,317,022)(20,470,955 - 20,472,032)
sequence
gaattcagaggtctttcccagaccatgttcctcatggatgctgccccttc
atccacatagtactgctttttttttttaaaggaaaaaacaatatcaagag
caaaccccagatattaagtttgtttcacttggagagagagagagagagag
agagagagagagagagagagagagagagagagagagagagagaaaacatg
tatgaacttcaacatcaagaaatctattaaaacatagggattataatgtt
ataatctttacagattaaacctggtataaaaagcagtaaggcttgcatta
aaatagtaacacaagaatagagaagagaatattccagaatttgatggcta
attatacttgagaaggatgcagggggggtgaatattctgaaattagagtc
tcgtcttttttttttttttttaataattagaagtaataaaaggagatccg
agcttcaaggggagctaatgatgccgggttaacaaaatcaccacaggatg
ctgaggctctccgagatgtccaaatgctgtaaagacaggcagttgtcctt
cacagatttctcgcataccttttctaaatcagggccatctgcaagaactc
agtgaaactgtgactcctatagctcattttgctctgcagttggtctcctt
gtcttcaggcagaattgtgctgagggtcagatgtacattccgtatgcagc
cctggccatacggcattggaggggtacccagagacgacttcagaaactgc
ctggaactggcagctacaatcccccgtcccttagaagtagcacaccttcc
cctgtttgcattcattccatccaatggactctgggcttgacaaggtgagc
taaaggggggccaattaatcctcaacataaagccagtttgttgagtatgc
aagtttgtagatgtgg
gaattcattcagagtttcagcagcacagatgtcaaagggagtctaggatc
aactctgggaggccacccaagctcatcctaagagcctttgcaggcagcat
ggattctgggtagttctggaaacctggaacttttaaaagtgcttaggaaa
gtccagaactaccagagtgtttcccctgactagatacactgttgttactc
atgagccagatgtggtgcaaacctgtaattccagcaccctagagacaata
gctggaggatcctgatatggaaaccagtcaagagctgctcagacttccgg
gatggagacaagggaggggctgccaaaggccagaataaaaaaggtagcaa
agagttgctacctggaactcctcatcatgtggaacccacagtttctggga
gacttggcttctacttcaataatcactgtgacatctacatctgattcctg
aagagaatcagattcagaaaagtgtgaggtgggtgcaatctcacactgtg
tttacagtggcctgaattctgatgagcaggttatcagtaaaaaatgcatt
cacatgatttcagccaactccccacaaaagcagcacaaacactattaatc
ttgcaatatgtattatatatgtgtgtatacattatatattatccacgtgc
gcgcacacacatatagttgttcctttgttgctgcttgggagttattttaa
tgatgaaataattttctctatattcattaacatgagaaacaatactgaat
ctgcaaacgtgtaataatatactctacttttctgactcatagatcactca
tctacaaaatgcaagacacagactctacaagtctttacttggctgttgta
aaaacatgaagaggatagaaaagaagaggggaaaagcagcgctttgtata
cagaattgcctcatgcattctaagcaaaacaacccataatacaagaggcc
tcaacatttagagttgagcggatgacaccatgactggtcaccctcagtgt
atgaaggtgaaaactgaggcctcagggtatggaattaactttcccgagtc
aacagccaggtgagggaaaacaggact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_20316102_20317022
seq2: B6Ng01-129G21.b_44_959

seq1  GAATTCAGAGGTCTTTCCCAGACCATGTTCCTCATGGATGCTGCCCCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGGTCTTTCCCAGACCATGTTCCTCATGGATGCTGCCCCTTC  50

seq1  ATCCACATAGTACTGCTTTTTTTTTTTAAAGGAAAAAACAATATCAAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACATAGTACTGCTTTTTTTTTTTAAAGGAAAAAACAATATCAAGAG  100

seq1  CAAACCCCAGATATTAAGTTTGTTTCACTTGGAGAGAGAGAGAGAGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCCAGATATTAAGTTTGTTTCACTTGGAGAGAGAGAGAGAGAGAG  150

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAACATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAACATG  200

seq1  TATGAACTTCAACATCAAGAAATCTATTAAAACATAGGGATTATAATGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACTTCAACATCAAGAAATCTATTAAAACATAGGGATTATAATGTT  250

seq1  ATAATCTTTACAGATTAAACCTGGTATAAAAAGCAGTAAGGCTTGCATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTTTACAGATTAAACCTGGTATAAAAAGCAGTAAGGCTTGCATTA  300

seq1  AAATAGTAACACAAGAATAGAGAAGAGAATATTCCAGAATTTGATGGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTAACACAAGAATAGAGAAGAGAATATTCCAGAATTTGATGGCTA  350

seq1  ATTATACTTGAGAAGGATGCAGGGGGGGTGAATATTCTGAAATTAGAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACTTGAGAAGGATGCAGGGGGGGTGAATATTCTGAAATTAGAGTC  400

seq1  TCGTCTTTTTTTTTTTTTTTTAATAATTAGAAGTAATAAAAGGAGATCCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCTTTTTTTTTTTTTTTTAATAATTAGAAGTAATAAAAGGAGATCCG  450

seq1  AGCTTCAAGGGGAGCTAATGATGCCGGGTTAACAAAATCACCACAGGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCAAGGGGAGCTAATGATGCCGGGTTAACAAAATCACCACAGGATG  500

seq1  CTGAGGCTCTCCGAGATGTCCAAATGCTGTAAAGACAGGCAGTTGTCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCTCTCCGAGATGTCCAAATGCTGTAAAGACAGGCAGTTGTCCTT  550

seq1  CACAGATTTCTCGCATACCTTTTCTAAATCAGGGCCATCTGCAAGAACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATTTCTCGCATACCTTTTCTAAATCAGGGCCATCTGCAAGAACTC  600

seq1  AGTGAAACTGTGACTCCTATAGCTCA-TTTGCTCTGCAGTTGGTCTCCTT  649
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGTGAAACTGTGACTCCTATAGCTCATTTTGCTCTGCAGTTGGTCTCCTT  650

seq1  GTCTTCAGGCAGAATTGTGCTGA-GGTCAGATGTACATTCCGTATGCAGC  698
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTCTTCAGGCAGAATTGTGCTGAGGGTCAGATGTACATTCCGTATGCAGC  700

seq1  CCTGGCCATACGGCATTGGAGGGGTACCCAGAGACGACTTCAGAAACTGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCCATACGGCATTGGAGGGGTACCCAGAGACGACTTCAGAAACTGC  750

seq1  CTGGAACTGGCAGCTACAATCCCCCGTCCCTTAGAAGTAGCACACCTTCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACTGGCAGCTACAATCCCCCGTCCCTTAGAAGTAGCACACCTTCC  800

seq1  CCTGTTTGCATTCATTCCATCCAATGGACTCTGGTCTTTGACAAGGTGAG  848
      |||||||||||||||||||||||||||||||||| | |||||||||||||
seq2  CCTGTTTGCATTCATTCCATCCAATGGACTCTGGGC-TTGACAAGGTGAG  849

seq1  CTAAAAGGGGGGCCAATTAATCCTCAGACAATAAGGCCAGGTTGTTTGAG  898
      || ||||||||||||||||||||||| || |||| ||||| ||| |||||
seq2  CT-AAAGGGGGGCCAATTAATCCTCA-AC-ATAAAGCCAGTTTG-TTGAG  895

seq1  TATGCAAGTTGTGTAAGATGTGG  921
      |||||||||| ||| ||||||||
seq2  TATGCAAGTT-TGT-AGATGTGG  916

seq1: chr2_20470955_20472032
seq2: B6Ng01-129G21.g_68_1144 (reverse)

seq1  AGTCCTGTTTT-CCTCA-CTGGCTGTGTGACTCGGGGAAAGTAAATT-CA  47
      ||||||||||| ||||| |||||||| |||||| |||||||| |||| ||
seq2  AGTCCTGTTTTCCCTCACCTGGCTGT-TGACTC-GGGAAAGTTAATTCCA  48

seq1  TACCCTTGAGCCTCAGTTTTCACCTCCATACACTGAGGGTGACCAGTCAT  97
      ||||||   |||||||||||||||| ||||||||||||||||||||||||
seq2  TACCCTGAGGCCTCAGTTTTCACCTTCATACACTGAGGGTGACCAGTCAT  98

seq1  GGTGTCAT-CGCTCAACTCTAAATGTTGAGGCCTCTTGTATTATGGGTTG  146
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCATCCGCTCAACTCTAAATGTTGAGGCCTCTTGTATTATGGGTTG  148

seq1  TTTTTGCTTAGAATGCATGAGGCAATTCTGTATTACAAAGCGCTGCTTTT  196
       ||||||||||||||||||||||||||||||| ||||||||||||| |||
seq2  -TTTTGCTTAGAATGCATGAGGCAATTCTGTA-TACAAAGCGCTGC-TTT  195

seq1  TCCCCTCTTCTTTTCTATCCTCTTCATGTTTTTACAACAGCCAAGTAAAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCTTCTTTTCTATCCTCTTCATGTTTTTACAACAGCCAAGTAAAG  245

seq1  ACTTGTAGAGTCTGTGTCTTGCATTTTGTAGATGAGTGATCTATGAGTCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTAGAGTCTGTGTCTTGCATTTTGTAGATGAGTGATCTATGAGTCA  295

seq1  GAAAAGTAGAGTATATTATTACACGTTTGCAGATTCAGTATTGTTTCTCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTAGAGTATATTATTACACGTTTGCAGATTCAGTATTGTTTCTCA  345

seq1  TGTTAATGAATATAGAGAAAATTATTTCATCATTAAAATAACTCCCAAGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATGAATATAGAGAAAATTATTTCATCATTAAAATAACTCCCAAGC  395

seq1  AGCAACAAAGGAACAACTATATGTGTGTGCGCGCACGTGGATAATATATA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAAAGGAACAACTATATGTGTGTGCGCGCACGTGGATAATATATA  445

seq1  ATGTATACACACATATATAATACATATTGCAAGATTAATAGTGTTTGTGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATACACACATATATAATACATATTGCAAGATTAATAGTGTTTGTGC  495

seq1  TGCTTTTGTGGGGAGTTGGCTGAAATCATGTGAATGCATTTTTTACTGAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTGTGGGGAGTTGGCTGAAATCATGTGAATGCATTTTTTACTGAT  545

seq1  AACCTGCTCATCAGAATTCAGGCCACTGTAAACACAGTGTGAGATTGCAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGCTCATCAGAATTCAGGCCACTGTAAACACAGTGTGAGATTGCAC  595

seq1  CCACCTCACACTTTTCTGAATCTGATTCTCTTCAGGAATCAGATGTAGAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTCACACTTTTCTGAATCTGATTCTCTTCAGGAATCAGATGTAGAT  645

seq1  GTCACAGTGATTATTGAAGTAGAAGCCAAGTCTCCCAGAAACTGTGGGTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGTGATTATTGAAGTAGAAGCCAAGTCTCCCAGAAACTGTGGGTT  695

seq1  CCACATGATGAGGAGTTCCAGGTAGCAACTCTTTGCTACCTTTTTTATTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGATGAGGAGTTCCAGGTAGCAACTCTTTGCTACCTTTTTTATTC  745

seq1  TGGCCTTTGGCAGCCCCTCCCTTGTCTCCATCCCGGAAGTCTGAGCAGCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTTTGGCAGCCCCTCCCTTGTCTCCATCCCGGAAGTCTGAGCAGCT  795

seq1  CTTGACTGGTTTCCATATCAGGATCCTCCAGCTATTGTCTCTAGGGTGCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACTGGTTTCCATATCAGGATCCTCCAGCTATTGTCTCTAGGGTGCT  845

seq1  GGAATTACAGGTTTGCACCACATCTGGCTCATGAGTAACAACAGTGTATC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTACAGGTTTGCACCACATCTGGCTCATGAGTAACAACAGTGTATC  895

seq1  TAGTCAGGGGAAACACTCTGGTAGTTCTGGACTTTCCTAAGCACTTTTAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAGGGGAAACACTCTGGTAGTTCTGGACTTTCCTAAGCACTTTTAA  945

seq1  AAGTTCCAGGTTTCCAGAACTACCCAGAATCCATGCTGCCTGCAAAGGCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCAGGTTTCCAGAACTACCCAGAATCCATGCTGCCTGCAAAGGCT  995

seq1  CTTAGGATGAGCTTGGGTGGCCTCCCAGAGTTGATCCTAGACTCCCTTTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGATGAGCTTGGGTGGCCTCCCAGAGTTGATCCTAGACTCCCTTTG  1045

seq1  ACATCTGTGCTGCTGAAACTCTGAATGAATTC  1078
      ||||||||||||||||||||||||||||||||
seq2  ACATCTGTGCTGCTGAAACTCTGAATGAATTC  1077