BAC Information

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BAC

Clone NameB6Ng01-130A13
Chromosome2 (Build37)
Map Location 100,609,921 - 100,610,459
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668702, LOC100042907, LOC241572, LOC668705
Downstream geneB230118H07Rik, Rag2, Rag1, LOC100042930, Traf6, 2600010E01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130A13.bB6Ng01-130A13.g
ACCDH931451DH931452
length9381,140
definitionDH931451|Mus musculus domesticus DNA, BAC clone: B6Ng01-130A13, 5' end.DH931452|Mus musculus domesticus DNA, BAC clone: B6Ng01-130A13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgatttct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtataagcttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttgat
taggattttgtccctttgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttaatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctagag
ctttagatgtgttgtcaagctgctagtatgtgctctct
gaattctttatgacccatttttaaatttggttgtttagtttgttgatctc
taactttttaaattatttatgtgttttgtatattagccttctgtcagatg
tagggttggtgaaaatctttttctaatcctattgacagtgtcctttgact
tacaaaagattttcagtttcatgaggtcccatacattaattgctaatctt
agtgtctaagccattgatgctctttcaggaagttgtctctaataccagtg
agttcaatgttattcctcactttctgttctattagatttagtgtatctga
ttttatgatgagaactttgatccacttggatttgagatttctgcagagtg
ataaatgtgcatctatttgcattcttttacatgcagatacccagttggac
cagcaccatttgttgaagatgctttctttttccattgtatggctctgtct
tccttataaaaaaatcaagtgtctgtagctgtgtagattcatttctgggt
ctttgattctattccatttatcaacctgtctgttttcatgccaatatcat
gtgaattttattattattactctatattgtaactttaaatcagggatgac
gatgcctccagaagttcttttattgtactggattgttttgaggtatctac
ctgtgttttctacttttccatataaagttgagaattgctctttcaagatc
tgtaatgaattatgctaaaattttgattggaattgcattgaatctataga
ttgcttttggtaagatgtccagttttactatgttatttctactaatccat
gaacatggaatatctttccatcttctgatatctttctcaatttctttctt
catagatttgaagttgttgtcgtagagggctttcacttgcttgattacca
ttacaccaagatactttattatttgtgggtattgtaaaggtgttgtttcc
ctaatttgttgacccatataatgtccatataaagaagctactgattttta
gttgattttgtatccagcccctttgctgaagaatgtttatcatctgttag
gcattttctggtagaatttgggaaaagggatcaccttgtcctaaccatag
gccttgaatagaaaacctggacattctttctgtgtttgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_100609921_100610459
seq2: B6Ng01-130A13.b_45_583 (reverse)

seq1  GGATCAAGTTGACCTTCTAAACAGTCCCATATCCCCTAAAGAAATAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAAGTTGACCTTCTAAACAGTCCCATATCCCCTAAAGAAATAGAAG  50

seq1  CAGTTATTAATAGTCTCCCAACCAAAAAAAGCCCAGGACCAGATGGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTATTAATAGTCTCCCAACCAAAAAAAGCCCAGGACCAGATGGGTTT  100

seq1  AGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAATTCCAGTTCTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAATTCCAGTTCTGCA  150

seq1  CAAACTATTTCACAAGATAGAAGTAGAAGGTACTCTACCCAACTCATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTATTTCACAAGATAGAAGTAGAAGGTACTCTACCCAACTCATTTT  200

seq1  ATGAAGCCACTATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCCACTATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAG  250

seq1  ATAGAGAACTTCAGACCAATTTCTCTTATGAATATCGATGCAAAAATCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGAACTTCAGACCAATTTCTCTTATGAATATCGATGCAAAAATCCT  300

seq1  TAATAAAATTCTCGCTAACCGAATCCAAGAACACATTAAAGAAATCATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAATTCTCGCTAACCGAATCCAAGAACACATTAAAGAAATCATCC  350

seq1  ATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATGGTTTAATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATGGTTTAATATA  400

seq1  CGAAAATCCATCAATGTAATCCATTATATAAACAAACTCAAAGACAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAATCCATCAATGTAATCCATTATATAAACAAACTCAAAGACAAAAA  450

seq1  CCACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACAAGATCCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACAAGATCCAAC  500

seq1  ACCCATTCATGATAAAAGTTTTGGAAAGATCAGGAATTC  539
      |||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTCATGATAAAAGTTTTGGAAAGATCAGGAATTC  539